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BioLiP
>protein
MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFFNL
LAQKLELHKFIRIKRGKINETIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQK
RWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLE

The query sequence (length=216) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1yyk:A 221 216 1.0000 0.9774 1.0000 1.64e-155 2ez6:A, 2ez6:B, 1jfz:A, 1jfz:B, 1jfz:C, 1jfz:D, 4m2z:A, 4m2z:B, 4m30:A, 4m30:B, 2nue:A, 2nuf:A, 2nuf:B, 2nug:A, 2nug:B, 1rc5:A, 1rc5:B, 1rc5:C, 1rc5:D, 1rc7:A, 1yyo:A, 1yyw:A, 1yyw:C, 1yz9:A
2 7r97:A 226 224 0.3519 0.3363 0.3393 8.46e-28 7r97:B
3 7v6c:A 1540 249 0.3380 0.0474 0.2932 5.85e-19
4 7w0b:A 1586 249 0.3287 0.0448 0.2851 1.24e-17 7w0d:F
5 7xw2:A 725 157 0.2176 0.0648 0.2994 5.16e-17
6 7xw2:A 725 62 0.0880 0.0262 0.3065 3.3
7 5zal:A 1314 158 0.2176 0.0358 0.2975 7.55e-17 2eb1:A, 2eb1:B, 2eb1:C, 4ngd:A, 5zam:A
8 5zal:A 1314 134 0.1667 0.0274 0.2687 0.045 2eb1:A, 2eb1:B, 2eb1:C, 4ngd:A, 5zam:A
9 8hf0:A 1561 256 0.3287 0.0455 0.2773 7.70e-17 8hf0:D, 8hf1:A, 8hf1:D, 8hf1:G, 7w0a:A, 7w0a:E, 7w0c:A, 7w0d:A, 7w0e:A, 7w0f:A
10 7yym:A 1281 154 0.2130 0.0359 0.2987 1.13e-16 4ngb:A, 4ngc:A, 4ngg:A, 4nh3:A, 4nh5:A, 4nh6:A, 7yyn:A, 7zpi:A, 7zpj:A, 7zpk:A
11 7yym:A 1281 73 0.0972 0.0164 0.2877 1.3 4ngb:A, 4ngc:A, 4ngg:A, 4nh3:A, 4nh5:A, 4nh6:A, 7yyn:A, 7zpi:A, 7zpj:A, 7zpk:A
12 8dg5:A 1635 164 0.2130 0.0281 0.2805 6.76e-16 8dg7:A
13 8dg5:A 1635 100 0.1250 0.0165 0.2700 0.94 8dg7:A
14 8dfv:A 1664 164 0.2130 0.0276 0.2805 7.10e-16
15 8dfv:A 1664 100 0.1250 0.0162 0.2700 0.95
16 8dga:A 1629 176 0.2130 0.0282 0.2614 4.43e-14
17 8dga:A 1629 100 0.1250 0.0166 0.2700 1.2
18 7eld:A 1137 142 0.2083 0.0396 0.3169 4.07e-13 7ele:A
19 7eld:A 1137 119 0.1620 0.0308 0.2941 1.39e-05 7ele:A
20 5b16:A 722 170 0.2315 0.0693 0.2941 9.27e-13
21 5b16:A 722 232 0.2685 0.0803 0.2500 3.51e-12
22 2a11:A 154 144 0.2130 0.2987 0.3194 1.38e-12
23 6lxe:A 768 162 0.2269 0.0638 0.3025 3.27e-12
24 6lxe:A 768 152 0.1759 0.0495 0.2500 2.93e-06
25 6lxd:A 918 232 0.2685 0.0632 0.2500 2.85e-11 9asm:A, 9asn:A, 9aso:A, 9asp:A, 9asq:A, 6v5b:A, 6v5c:A
26 6lxd:A 918 114 0.1667 0.0392 0.3158 1.38e-07 9asm:A, 9asn:A, 9aso:A, 9asp:A, 9asq:A, 6v5b:A, 6v5c:A
27 7vg3:A 860 155 0.1991 0.0500 0.2774 1.17e-09 7vg2:A
28 7vg3:A 860 83 0.1157 0.0291 0.3012 0.089 7vg2:A
29 7zpk:C 233 79 0.1204 0.1116 0.3291 3.36e-06 3adl:A, 5n8l:A, 5n8m:A
30 1di2:A 69 60 0.1065 0.3333 0.3833 5.04e-06
31 8dga:K 182 65 0.1111 0.1319 0.3692 3.53e-04 8dg7:K
32 8dfv:K 253 94 0.1389 0.1186 0.3191 3.54e-04 8dg5:K
33 8dfv:K 253 65 0.1111 0.0949 0.3692 0.001 8dg5:K
34 6sdw:A 177 62 0.0880 0.1073 0.3065 3.76e-04 6htu:A, 6htu:B, 6htu:C, 6sdy:A
35 6sdw:A 177 44 0.0926 0.1130 0.4545 0.045 6htu:A, 6htu:B, 6htu:C, 6sdy:A
36 1ekz:A 76 45 0.0787 0.2237 0.3778 5.57e-04
37 3rv0:B 304 209 0.2778 0.1974 0.2871 0.001 3rv0:A, 3rv0:C, 3rv0:D
38 5t16:A 276 100 0.1296 0.1014 0.2800 0.003 2lbs:B, 2lup:B, 4oog:C, 5t16:B, 5t16:I, 5t16:J, 1t4l:B
39 2ffl:A 732 117 0.1620 0.0478 0.2991 0.018 2ffl:B, 2ffl:C, 2ffl:D, 2qvw:A, 2qvw:B, 2qvw:C, 2qvw:D
40 7zlq:B 82 50 0.0741 0.1951 0.3200 0.030 7zlq:A
41 7v6c:B 260 84 0.0926 0.0769 0.2381 0.14
42 7v6c:B 260 62 0.0741 0.0615 0.2581 0.36
43 5ztm:A 168 69 0.0926 0.1190 0.2899 0.14 5ztm:B
44 2l3j:A 236 47 0.0694 0.0636 0.3191 0.16 2l3c:A
45 2l3j:A 236 53 0.0741 0.0678 0.3019 3.2 2l3c:A
46 1di2:B 60 60 0.0880 0.3167 0.3167 1.7
47 4at5:A 294 50 0.0556 0.0408 0.2400 2.1 4at3:A, 4at4:A
48 4gd3:A 179 64 0.0694 0.0838 0.2344 2.5 6g94:A, 6g94:B, 4gd3:B
49 7nkb:G 251 78 0.0926 0.0797 0.2564 3.1 7nkk:G, 7nkn:G
50 5dv7:C 137 47 0.0648 0.1022 0.2979 5.5
51 5dv7:C 137 52 0.0741 0.1168 0.3077 6.4
52 9asp:C 92 64 0.0926 0.2174 0.3125 7.0
53 5mza:A 440 54 0.0787 0.0386 0.3148 7.5
54 6ywe:5 350 56 0.0787 0.0486 0.3036 7.5 6yws:5, 6ywv:5, 6ywx:5, 6ywy:5

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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