Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
MKYFAKYLTSAPIMATVALVSLSVVLIELNHFFPGLQYGTY

The query sequence (length=41) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7s3d:J 41 41 1.0000 1.0000 1.0000 2.66e-24 7s3d:S, 7s3d:j
2 7lx0:S 43 40 0.5854 0.5581 0.6000 7.02e-07 7lx0:j, 7lx0:J, 6pnj:J, 6pnj:S, 6pnj:j
3 7yca:J 41 35 0.4390 0.4390 0.5143 1.03e-06
4 6kif:J 41 38 0.4146 0.4146 0.4474 3.43e-06 6kif:T, 6kif:l, 6kig:J, 6kig:T, 6kig:l
5 6l4u:J 41 36 0.3659 0.3659 0.4167 5.44e-06
6 4fe1:J 41 38 0.3659 0.3659 0.3947 7.57e-06 7fix:J1, 7fix:J2, 7fix:J3, 1jb0:J, 6k33:aJ, 6k33:bJ, 6k33:cJ, 7m75:J, 7m76:J, 7m78:J, 3pcq:J, 6pfy:J, 6pfy:S, 6pfy:f, 6pgk:J, 6pgk:S, 6pgk:f, 6tra:J, 6trc:J, 6trc:j, 6trc:8, 6trd:J, 6trd:j, 6trd:8, 5zf0:J1, 5zf0:J2, 5zf0:J3, 5zf0:J4, 5zf0:J6, 5zf0:J5
7 7blz:J 38 30 0.3902 0.4211 0.5333 1.65e-05 6fos:J, 8wey:J, 5zgb:J, 5zgh:J
8 7d0j:J 41 35 0.3659 0.3659 0.4286 2.17e-05 7bgi:J, 7blx:J, 7dz7:J, 7dz8:J, 8h2u:J, 6ijj:J, 6ijo:J, 6jo5:J, 6jo6:J, 7r3k:J, 7wyi:J, 7wzn:J, 7zq9:J, 7zqc:J, 7zqd:J, 7zqd:J2
9 6k61:J 45 37 0.3659 0.3333 0.4054 2.76e-05 6jeo:aJ, 6jeo:bJ, 6jeo:cJ, 6jeo:dJ, 6k61:j, 6tcl:J1, 6tcl:J2, 6tcl:J, 6tcl:JJ, 7y3f:J
10 7a4p:J 41 35 0.3415 0.3415 0.4000 4.29e-05 6zzx:J, 6zzy:J
11 8cmo:J 40 35 0.3659 0.3750 0.4286 5.02e-05
12 8wm6:J 42 35 0.3902 0.3810 0.4571 7.32e-05 8wmj:J, 8wmv:J, 8wmw:J, 7y7b:J, 7y8a:J
13 7dr0:J 37 33 0.3659 0.4054 0.4545 1.65e-04 7dr1:J, 7dr2:aJ, 7dr2:bJ, 7dr2:cJ, 7dr2:dJ
14 5l8r:J 42 35 0.3415 0.3333 0.4000 2.48e-04 7dkz:J, 6ly5:j, 4rku:J, 4xk8:J, 4xk8:j, 4y28:J, 6yac:J, 6yez:J, 6zoo:J, 6zxs:J
15 8htu:J 41 34 0.3659 0.3659 0.4412 2.48e-04 7ksq:J, 7kux:J, 6l35:J, 7xqp:J
16 6igz:J 41 35 0.3659 0.3659 0.4286 2.65e-04
17 6qph:J 41 34 0.3659 0.3659 0.4412 3.49e-04 6rhz:J, 6sl5:J, 6yxr:J
18 8bcv:J 43 34 0.3171 0.3023 0.3824 0.002 7ew6:J, 7ewk:J, 7f9o:J, 7f9o:m, 8j6z:J, 8j7a:J, 8j7b:J, 3lw5:J, 2o01:J, 7wfd:AJ, 7wfe:BJ, 7wg5:AJ, 7wg5:BJ, 8wgh:J, 2wsc:J, 2wse:J, 2wsf:J, 5zji:J
19 6vpv:J 39 37 0.3415 0.3590 0.3784 0.003 6vpv:j, 6vpv:8
20 7coy:aJ 35 33 0.2927 0.3429 0.3636 0.006 7coy:bJ, 7coy:cJ
21 7y5e:JN 38 31 0.2683 0.2895 0.3548 0.026 7y5e:J2, 7y7a:J7, 7y7a:Jo
22 4l6v:F 125 38 0.3171 0.1040 0.3421 0.072 8am5:j, 8asl:j, 8asp:j, 6hqb:J, 4kt0:J, 4l6v:f, 4l6v:6, 6nwa:J, 6nwa:j, 6nwa:S, 5oy0:J, 5oy0:j, 5oy0:7, 7umh:J, 7umh:S, 7umh:j, 6uzv:J, 6uzv:j, 6uzv:7
23 7qco:q 37 35 0.2683 0.2973 0.3143 1.1 7qco:j
24 3gbe:A 558 16 0.2195 0.0161 0.5625 2.0
25 8jnc:A 391 27 0.3171 0.0332 0.4815 2.3 8jnc:B, 8jno:A, 8jno:B, 8joo:A, 8joo:B, 8jua:A, 8jua:B
26 2q2r:A 370 27 0.2439 0.0270 0.3704 8.3 5brd:A, 5brd:B, 5bre:A, 5bre:B, 5brf:A, 5brf:B, 5brh:A, 5brh:B, 2q2r:B, 7s2p:A, 7s2p:B
27 4how:A 559 16 0.1951 0.0143 0.5000 8.8 4hox:A, 4hoz:A, 4hp5:A, 4hph:A
28 2fvl:A 323 17 0.2439 0.0310 0.5882 9.1 2fvl:B, 2fvl:C

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218