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BioLiP
>protein
MKTGIHPEYRPVVFVDTSTDFKFLSGSTKSSSETIKWEDGNEYPLLRVEISSDSHPFYT

The query sequence (length=59) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7nhn:4 79 59 1.0000 0.7468 1.0000 4.21e-39 8a57:4, 8a5i:4, 8a63:4, 8uu4:3, 8uu5:3, 8uu6:3, 8uu7:3, 8uu8:3, 8uua:3
2 8uu9:3 70 59 1.0000 0.8429 1.0000 7.62e-39
3 6o8z:1 83 59 0.7627 0.5422 0.7627 1.76e-30 6o8w:1, 6o8x:1, 6o8y:1, 6o90:1, 7p7q:3, 7p7r:3, 7p7s:3, 7p7t:3, 7p7u:3
4 5myj:B3 79 59 0.7458 0.5570 0.7458 3.33e-30
5 5li0:3 83 59 0.7288 0.5181 0.7288 7.93e-30 7aso:h, 6fxc:AY, 6fxc:BY, 5nd8:3, 5nd9:3, 5ngm:AY, 8p2f:4, 8p2g:4, 8p2h:4, 6s0x:Y, 6s0z:Y, 6s12:Y, 6s13:Y, 5tcu:LF, 8y36:Y, 8y37:Y, 6yef:3
6 7p48:Y 70 59 0.7288 0.6143 0.7288 1.18e-29
7 7nhl:4 59 59 0.5763 0.5763 0.5763 2.98e-18 7nhm:4
8 8fmw:Ac 81 59 0.5763 0.4198 0.5763 2.68e-17 8fn2:c
9 7nhk:3 55 58 0.5593 0.6000 0.5690 3.24e-16
10 6i7v:D7 68 59 0.5424 0.4706 0.5424 8.84e-14
11 6dzi:g 75 62 0.5424 0.4267 0.5161 1.64e-13 6dzp:g, 8fr8:H
12 7jil:a 52 59 0.5424 0.6154 0.5424 3.22e-12
13 8rd8:fJ 61 56 0.4407 0.4262 0.4643 3.77e-10 8rdv:fJ, 8rdw:fJ
14 3j9w:B3 64 59 0.3559 0.3281 0.3559 1.22e-05 6ha1:6, 6ha8:6, 6htq:Z, 5njt:y, 7o5b:6, 8qcq:6, 8qpp:6, 7qv1:6, 7qv2:6, 7qv3:6, 8r55:6, 8s1p:6, 8s1u:6
15 5o61:g 59 59 0.3898 0.3898 0.3898 1.94e-05 8v9j:3, 8v9k:3, 8v9l:3, 8whx:4, 8wi7:4, 8wib:4
16 5zeb:2 66 59 0.3898 0.3485 0.3898 2.34e-05 8kab:g, 5o60:g, 7s0s:h, 8why:4, 7xam:g, 8xz3:g, 7y41:g, 5zep:y, 5zet:2
17 9c4g:4 66 59 0.3390 0.3030 0.3390 1.91e-04 8crx:4, 8cvm:4
18 7msc:6 60 59 0.3220 0.3167 0.3220 0.033 7kgb:6, 7msh:6, 7msm:6, 7msz:6, 7mt2:6, 7mt3:6, 7mt7:6, 7sfr:6
19 5a9z:Aa 71 59 0.3220 0.2676 0.3220 0.13 5aa0:Aa, 7azo:L31A, 7azo:L31B, 7azs:L31A, 7azs:L31B, 9b00:14, 9b00:24, 6b4v:BA, 6b4v:FC, 6boh:BA, 6boh:GC, 6bok:BA, 6bok:EC, 6buw:R4, 6buw:Y4, 6bz6:R4, 6bz6:Y4, 6bz7:R4, 6bz7:Y4, 6bz8:R4, 6bz8:Y4, 6cae:14, 6cae:24, 6cfj:14, 6cfj:24, 6cfk:14, 6cfk:24, 6cfl:14, 6cfl:24, 8cvj:14, 8cvj:24, 8cvk:14, 8cvk:24, 8cvl:14, 8cvl:24, 5czp:Y4, 5czp:R4, 6czr:14, 6czr:24, 5dfe:Y4, 5dfe:R4, 5dox:14, 5dox:24, 5doy:14, 5doy:24, 5e7k:M8, 5e81:M8, 8ekb:14, 8ekb:24, 5el4:M8, 5el5:M8, 5el6:M8, 5el7:M8, 8ev6:14, 8ev6:24, 8ev7:14, 8ev7:24, 5f8k:14, 5f8k:24, 8fc1:14, 8fc1:24, 8fc2:14, 8fc2:24, 8fc3:14, 8fc3:24, 8fc4:14, 8fc4:24, 8fc5:14, 8fc5:24, 8fc6:14, 8fc6:24, 5fdu:14, 5fdu:24, 5fdv:14, 5fdv:24, 6fkr:14, 6fkr:24, 8fom:R4, 8fom:Y4, 8fon:R4, 8fon:Y4, 8g29:14, 8g29:24, 8g2a:14, 8g2a:24, 8g2b:14, 8g2b:24, 8g2c:14, 8g2c:24, 8g2d:14, 8g2d:24, 6gsj:M8, 6gsk:M8, 6gsl:M8, 6gzq:Z1, 6gzx:Z1, 6gzx:Z2, 6gzz:Z1, 6gzz:Z2, 5hau:12, 5hau:22, 5hcp:14, 5hcp:24, 5hcq:14, 5hcq:24, 5hcr:14, 5hcr:24, 5hd1:14, 5hd1:24, 5ib7:M8, 5ib8:M8, 5ibb:M8, 5ibb:I5, 5imq:v, 5imr:v, 5j30:R4, 5j30:Y4, 5j3c:R4, 5j3c:Y4, 5j4b:14, 5j4b:24, 5j4c:14, 5j4c:24, 5j4d:BA, 5j4d:GC, 5j8b:4, 7jql:14, 7jql:24, 7jqm:14, 7jqm:24, 4l47:R4, 4l47:Y4, 4l71:R4, 4l71:Y4, 4lel:R4, 4lel:Y4, 4lfz:R4, 4lfz:Y4, 7lh5:D4, 4lnt:R4, 4lnt:Y4, 4lsk:R4, 4lsk:Y4, 4lt8:R4, 4lt8:Y4, 7md7:14, 7md7:24, 6n9e:14, 6n9e:24, 6n9f:14, 6n9f:24, 5ndj:M8, 5ndj:I5, 5ndk:M8, 5ndk:I5, 6nd5:14, 6nd5:24, 6nd6:14, 6nd6:24, 6ndk:R4, 6ndk:Y4, 6nsh:R4, 6nsh:Y4, 6nta:R4, 6nta:Y4, 6nuo:R4, 6nuo:Y4, 6nwy:Y4, 6o3m:R4, 6o3m:Y4, 6o97:14, 6o97:24, 6of1:14, 6of1:24, 6of6:R4, 6of6:Y4, 6oj2:R4, 6oj2:Y4, 6ope:R4, 6ope:Y4, 6ord:R4, 6ord:Y4, 6osi:R4, 5ot7:Z, 6otr:R4, 6otr:Y4, 6oxa:R4, 6oxa:Y4, 6oxi:R4, 6oxi:Y4, 4p6f:R4, 4p6f:Y4, 4p70:R4, 4p70:Y4, 6q95:a, 6qnq:M8, 6qnq:I5, 6qnr:M8, 6qnr:I5, 7rq8:14, 7rq8:24, 7rq9:14, 7rq9:24, 7rqa:14, 7rqa:24, 7rqb:14, 7rqb:24, 7rqc:14, 7rqc:24, 7rqd:14, 7rqd:24, 7rqe:14, 7rqe:24, 8t8b:14, 8t8b:24, 8t8c:14, 8t8c:24, 4tua:R4, 4tua:Y4, 4tub:R4, 4tub:Y4, 4tuc:R4, 4tuc:Y4, 4tud:R4, 4tud:Y4, 4tue:R4, 4tue:Y4, 7u2h:14, 7u2h:24, 7u2i:14, 7u2i:24, 7u2j:14, 7u2j:24, 6ucq:14, 6ucq:24, 8ud6:14, 8ud6:24, 8ud7:14, 8ud7:24, 8ud8:14, 8ud8:24, 6uo1:14, 6uo1:24, 5uq7:4, 5uq8:4, 8uvr:14, 8uvr:24, 8uvs:14, 8uvs:24, 4v4x:B3, 4v4y:B3, 4v4z:B3, 4v51:B4, 4v5a:B4, 4v5a:D4, 4v5f:B4, 4v5f:D4, 4v5m:B4, 4v5n:B4, 4v5p:D4, 4v5q:B4, 4v5r:B4, 4v5r:D4, 4v67:B4, 4v68:B4, 4v6f:D4, 4v6f:A4, 4v6g:B4, 4v6g:D4, 4v7j:A4, 4v7j:B4, 4v7k:A4, 4v7k:B4, 4v7l:B4, 4v7l:D4, 4v7m:B4, 4v7m:D4, 4v7w:B4, 4v7w:D4, 4v7x:B4, 4v7x:D4, 4v7y:B4, 4v7y:D4, 4v87:A4, 4v87:D4, 4v8a:A4, 4v8a:B4, 4v8b:B4, 4v8c:A4, 4v8c:B4, 4v8d:B4, 4v8d:D4, 4v8e:A4, 4v8e:C4, 4v8f:A4, 4v8f:D4, 4v8g:B4, 4v8g:D4, 4v8h:B4, 4v8h:D4, 4v8i:B4, 4v8i:D4, 4v8n:B4, 4v8n:D4, 4v8u:B4, 4v8u:D4, 4v8x:B4, 4v8x:D4, 5v8i:14, 5v8i:24, 4v90:B4, 4v95:B4, 4v95:D4, 4v97:D4, 4v9a:B4, 4v9a:D4, 4v9b:B4, 4v9b:D4, 4v9j:B4, 4v9j:D4, 4v9k:B4, 4v9k:D4, 4v9l:B4, 4v9l:D4, 4v9m:B4, 4v9m:D4, 4v9r:B4, 4v9r:D4, 4v9s:B4, 4v9s:D4, 5vp2:14, 5vp2:24, 5vpo:R4, 5vpo:Y4, 5vpp:R4, 5vpp:Y4, 8vtu:14, 8vtu:24, 8vtv:14, 8vtv:24, 8vtw:14, 8vtw:24, 8vtx:14, 8vtx:24, 8vty:14, 8vty:24, 1vvj:R4, 1vvj:Y4, 1vy4:B4, 1vy4:D4, 1vy5:B4, 1vy5:D4, 1vy6:B4, 1vy6:D4, 1vy7:B4, 1vy7:D4, 4w29:B4, 4w29:D4, 4w2e:4, 4w2f:B4, 4w2f:D4, 4w2g:B4, 4w2g:D4, 4w2h:B4, 4w2h:D4, 4w2i:B4, 4w2i:D4, 4w4g:R4, 4w4g:Y4, 5w4k:14, 5w4k:24, 5wis:14, 5wis:24, 5wit:14, 5wit:24, 4wpo:A4, 4wpo:C4, 4wq1:M8, 4wq1:I5, 4wqf:A4, 4wqf:C4, 4wqr:M8, 4wqr:I5, 4wqu:A4, 4wqu:C4, 4wqy:A4, 4wqy:C4, 4wr6:M8, 4wr6:I5, 4wra:M8, 4wra:I5, 4wro:M8, 4wsd:M8, 4wsd:I5, 4wsm:M8, 4wsm:I5, 4wt1:M8, 4wt1:I5, 4wu1:M8, 4wu1:I5, 4wzd:M8, 4wzd:I5, 4wzo:M8, 4wzo:I5, 6xhv:14, 6xhv:24, 6xhw:14, 6xhw:24, 6xhx:14, 6xhx:24, 6xhy:14, 6xhy:24, 6xqd:14, 6xqd:24, 6xqe:14, 6xqe:24, 4y4o:14, 4y4o:24, 4y4p:14, 4y4p:24, 4ypb:R4, 4yzv:R4, 4yzv:Y4, 4z3s:14, 4z3s:24, 4z8c:14, 4z8c:24, 4zer:14, 4zer:24, 5zlu:w, 4zsn:R4
20 6a2b:A 272 54 0.2712 0.0588 0.2963 0.26
21 8cd1:Le 68 59 0.2881 0.2500 0.2881 0.48 6spb:1, 7unr:3, 7unu:3, 7unv:3, 7unw:3
22 7jrc:A 501 28 0.2034 0.0240 0.4286 0.80 7jru:A, 7jrv:A, 7jrw:A, 7js5:A, 7js7:A, 7js7:B
23 6eri:AZ 66 57 0.2712 0.2424 0.2807 1.2 5mmi:0, 5mmm:0, 5x8p:0, 5x8t:0
24 6xmg:A 638 47 0.2712 0.0251 0.3404 2.8 6xmf:A
25 5x4j:A 471 29 0.1695 0.0212 0.3448 2.8 5x4h:A, 5x4i:A, 5x4k:A
26 1v0w:A 496 35 0.2373 0.0282 0.4000 3.3 1v0r:A, 1v0t:A, 1v0u:A, 1v0v:A, 1v0y:A
27 6tm5:P 492 30 0.2373 0.0285 0.4667 3.4
28 6dk7:G 225 23 0.1356 0.0356 0.3478 4.6 6dk7:D, 6dk7:B, 6dk7:F, 6dk7:H
29 8i16:A 639 47 0.2712 0.0250 0.3404 5.5
30 8i3q:A 595 47 0.2712 0.0269 0.3404 5.7

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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