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BioLiP
>protein
MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQ
RVIRIRTGEADEAAL

The query sequence (length=95) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2gnk:A 95 95 1.0000 1.0000 1.0000 7.67e-62
2 2ns1:B 113 112 1.0000 0.8407 0.8482 1.15e-57 2nuu:G, 2nuu:H, 2nuu:I, 2nuu:J, 2nuu:K, 2nuu:L
3 4cnz:A 100 100 0.6632 0.6300 0.6300 1.03e-40 4cny:A, 4cnz:B, 4cnz:D, 4co4:A, 4co4:C, 4co4:B, 3o5t:B, 5ovo:B
4 4cnz:E 112 112 0.6632 0.5625 0.5625 8.17e-39 4cnz:C, 4cnz:F, 4co0:A, 4co0:B, 4co1:A, 4co1:B, 4co2:A, 4co2:B, 4co3:A, 4co3:B, 3mhy:A, 3mhy:C, 3mhy:B
5 5l9n:A 92 92 0.6211 0.6413 0.6413 2.34e-37
6 6yc7:F 94 95 0.5474 0.5532 0.5474 2.76e-34
7 2eg2:A 95 95 0.5684 0.5684 0.5684 5.84e-33
8 6yc7:A 105 105 0.5474 0.4952 0.4952 1.77e-32 6yc7:B, 6yc7:E, 6yc7:C
9 3lf0:A 99 97 0.4947 0.4747 0.4845 8.35e-30
10 8wm7:G 94 94 0.5263 0.5319 0.5319 5.92e-29
11 4c3k:D 101 98 0.5368 0.5050 0.5204 6.80e-28 4c3k:A, 4c3k:E, 8wm7:F, 2xzw:E
12 3lf0:B 112 111 0.4947 0.4196 0.4234 1.67e-27 3lf0:C
13 1ul3:B 94 95 0.5263 0.5319 0.5263 3.51e-27 1ul3:C
14 3n5b:A 112 112 0.5368 0.4554 0.4554 4.57e-27 8wm7:E
15 2j9d:B 103 99 0.5263 0.4854 0.5051 8.74e-26 2j9d:H, 2j9d:K
16 3ta0:C 99 97 0.4842 0.4646 0.4742 8.03e-25 3ta0:A, 3ta0:B, 3ta0:D, 3ta0:E, 3ta0:F
17 2xbp:A 113 112 0.5263 0.4425 0.4464 1.25e-24 4aff:A, 4c3k:C, 4c3k:F, 2xul:A, 2xul:B, 2xul:C, 2xul:D, 2xul:E, 2xul:F, 2xzw:A, 2xzw:B, 2xzw:C, 2xzw:D, 2xzw:F, 2xzw:G, 2xzw:H, 2xzw:I
18 2j9e:B 119 112 0.5263 0.4202 0.4464 1.28e-23 2j9c:A, 2j9c:C, 2j9c:B, 2j9d:C, 2j9d:E, 2j9d:F, 2j9d:I, 2j9d:J, 2j9d:L, 2j9e:A, 2j9e:C, 7p52:A
19 7p4v:A 113 112 0.5053 0.4248 0.4286 2.15e-23
20 2o66:B 108 92 0.4526 0.3981 0.4674 3.57e-23 2o66:A, 2o66:C, 2o67:A, 2o67:B, 2o67:C
21 3ta1:D 115 111 0.4842 0.4000 0.4144 1.48e-22 3ta1:A, 3ta1:C, 3ta1:B, 3ta1:E, 3ta1:F, 3ta2:A, 3ta2:B, 3ta2:C
22 2rd5:D 126 109 0.4632 0.3492 0.4037 1.65e-21 2rd5:C
23 1v3s:A 97 97 0.4211 0.4124 0.4124 7.76e-21 1v3s:B, 1v3s:C, 1v9o:A, 1v9o:B, 1v9o:C
24 3ncr:C 116 112 0.4526 0.3707 0.3839 5.09e-20 3ncq:A, 3ncq:B, 3ncq:C, 3ncr:A, 3ncr:B
25 7p50:A 121 112 0.4211 0.3306 0.3571 5.74e-19 7p50:B, 7p50:C
26 4usj:C 142 104 0.4526 0.3028 0.4135 8.58e-18 4usi:A, 4usi:C, 4usi:B, 4usj:D
27 7o4x:A 103 100 0.3789 0.3495 0.3600 5.66e-17
28 4ozl:A 104 97 0.4421 0.4038 0.4330 4.43e-16 4ozn:B
29 4ozn:A 116 109 0.4421 0.3621 0.3853 4.05e-14 4ozj:A, 4ozn:C
30 4rx6:B 115 112 0.3579 0.2957 0.3036 1.19e-12 4r25:A, 4rx6:A, 4rx6:D
31 5jtm:A 155 45 0.1579 0.0968 0.3333 0.026 5jtm:B, 5jtm:C, 5jtm:D, 5jtp:A, 5jtp:B, 5jtp:C, 5jtp:D
32 9cer:P 609 55 0.2000 0.0312 0.3455 0.44 9ces:P, 9cet:P
33 6b27:A 118 55 0.1895 0.1525 0.3273 0.86 6b27:B, 6b27:C, 6b27:D, 6b27:E, 6b27:F
34 3qtp:B 439 33 0.1474 0.0319 0.4242 1.00 3qtp:A
35 6epz:C 673 37 0.1474 0.0208 0.3784 2.4 6epy:A, 6epy:B, 6epy:C, 6epy:D, 6epz:A, 6epz:D, 6epz:B, 6eq0:A, 6eq0:B, 6eq1:A, 6eq1:B, 6eq8:D, 6eq8:B, 6eq8:C, 6eq8:A
36 7mvz:A 1641 28 0.0842 0.0049 0.2857 3.8 7tbi:F1, 7tbi:F2, 7tbj:F1, 7tbj:F2, 7tbk:F1, 7tbk:F2, 7tbl:F1, 7tbl:F2, 7tbm:F1, 7tbm:F2
37 7vrd:A 439 29 0.1158 0.0251 0.3793 4.4 7vrd:B, 7vrd:C, 7vrd:D
38 7sf6:A 294 21 0.1158 0.0374 0.5238 5.1
39 7rhw:A 437 28 0.1158 0.0252 0.3929 5.3 7rhv:A, 7rhv:B, 7rhw:B, 7ri0:A, 7ri0:B
40 5c2i:A 468 58 0.1895 0.0385 0.3103 5.9 5c2i:B, 5c2i:C, 5c2i:D
41 7k5k:A 545 35 0.1053 0.0183 0.2857 5.9 7k5k:B, 7k5k:C, 7k5k:D, 7k5k:E, 7k5k:F, 6wvv:A, 6wvv:B, 6wvv:C, 6wvv:D, 6wvv:E
42 1dxm:A 131 66 0.2211 0.1603 0.3182 6.1 1dxm:B, 1hpc:A, 1hpc:B, 1htp:A
43 5xxb:K 199 27 0.0947 0.0452 0.3333 7.3
44 7rbq:A 614 62 0.1684 0.0261 0.2581 9.7 7t39:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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