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BioLiP
>protein
MKKRLTITLSESVLENLEKMAREMGLSKSAMISVALENYKKGQE

The query sequence (length=44) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 1ea4:F 45 44 1.0000 0.9778 1.0000 6.07e-25 1b01:A, 1b01:B, 1ea4:H, 1ea4:J, 1ea4:K, 1ea4:L, 1ea4:D, 1ea4:E, 1ea4:G, 1ea4:B, 1ea4:A
2 3jcm:I 416 38 0.2955 0.0312 0.3421 2.1 5gan:F, 5gap:F, 5nrl:F, 5zwm:L, 5zwo:L
3 5l5w:Y 211 31 0.2273 0.0474 0.3226 3.4 5l5w:K, 5l5x:Y, 5l5x:K, 5l5y:Y, 5l5y:K, 5l5z:Y, 5l5z:K, 5l60:Y, 5l60:K, 5l61:Y, 5l61:K, 5l62:Y, 5l62:K, 5l63:Y, 5l63:K, 5l64:Y, 5l64:K
4 5jvj:B 797 28 0.2273 0.0125 0.3571 3.4
5 4a0g:C 681 44 0.2955 0.0191 0.2955 3.8
6 4a0g:A 769 44 0.2955 0.0169 0.2955 3.8 4a0f:B, 4a0g:B, 4a0h:A, 4a0h:B, 4a0r:A, 4a0r:B
7 8cvs:K 201 31 0.2273 0.0498 0.3226 4.0 5a0q:L, 5a0q:Z, 8bzl:K, 8bzl:Y, 8cvr:L, 8cvr:Z, 8cvs:Y, 8cvt:R, 8cvt:r, 1iru:Z, 1iru:L, 5le5:Y, 5le5:K, 5lex:Y, 5lex:K, 5ley:K, 5ley:Y, 5lez:K, 5lez:Y, 5lf0:K, 5lf0:Y, 5lf1:Y, 5lf1:K, 5lf3:Y, 5lf3:K, 5lf4:Y, 5lf4:K, 5lf6:K, 5lf6:Y, 5lf7:Y, 5lf7:K, 7lxv:K, 7lxv:Y, 5m32:K, 5m32:Y, 4r67:L, 4r67:Z, 4r67:n, 4r67:3, 8ud9:L, 8ud9:Z, 3unb:K, 3unb:Y, 3unb:m, 3unb:1, 8ypk:D, 8ypk:C, 8yvp:C, 8yvp:D
8 6wpu:A 439 18 0.2045 0.0205 0.5000 4.6
9 1ef0:B 394 29 0.2727 0.0305 0.4138 4.8
10 8olu:L 202 30 0.2045 0.0446 0.3000 5.6 8olu:Z, 6qm7:L, 6qm7:Z, 6tcz:L, 6tcz:l, 6td5:L, 6td5:l, 7zyj:L, 7zyj:l
11 5u34:A 960 25 0.2727 0.0125 0.4800 5.7
12 5cz8:Y 221 31 0.2273 0.0452 0.3226 6.0 5ahj:K, 5ahj:Y, 3bdm:K, 3bdm:Y, 5bou:Y, 5bou:K, 8bw1:K, 8bw1:Y, 5bxl:Y, 5bxl:K, 5bxn:Y, 5bxn:K, 5cgf:Y, 5cgf:K, 5cgg:K, 5cgg:Y, 5cgh:K, 5cgh:Y, 5cgi:Y, 5cgi:K, 5cz4:K, 5cz4:Y, 5cz5:Y, 5cz5:K, 5cz6:Y, 5cz6:K, 5cz7:Y, 5cz7:K, 5cz8:K, 5cz9:Y, 5cz9:K, 5cza:Y, 5cza:K, 5d0s:Y, 5d0s:K, 5d0t:Y, 5d0t:K, 5d0v:Y, 5d0v:K, 5d0w:Y, 5d0w:K, 5d0x:Y, 5d0x:K, 5d0z:Y, 5d0z:K, 3d29:K, 3d29:Y, 5dki:Y, 5dki:K, 5dkj:K, 5dkj:Y, 3dy3:K, 3dy3:Y, 3dy4:K, 3dy4:Y, 3e47:K, 3e47:Y, 4eu2:L, 4eu2:Z, 2f16:K, 2f16:Y, 2fak:K, 2fak:Y, 5fg7:Y, 5fg7:K, 5fg9:K, 5fg9:Y, 5fga:Y, 5fga:K, 5fgd:Y, 5fgd:K, 5fge:Y, 5fge:K, 5fgf:Y, 5fgf:K, 5fgg:Y, 5fgg:K, 5fgh:Y, 5fgh:K, 5fgi:Y, 5fgi:K, 5fhs:Y, 5fhs:K, 1fnt:L, 1fnt:Z, 9fst:K, 9fst:Y, 9fsv:K, 9fsv:Y, 9ft0:K, 9ft0:Y, 9ft1:K, 9ft1:Y, 4fzc:K, 4fzc:Y, 4fzg:K, 4fzg:Y, 1g0u:K, 1g0u:Y, 4g4s:L, 1g65:K, 1g65:Y, 6g7f:K, 6g7f:Y, 6g8m:K, 6g8m:Y, 6g8n:K, 6g8n:Y, 4gk7:K, 4gk7:Y, 6gop:Y, 6gop:K, 3gpj:K, 3gpj:Y, 3gpt:K, 3gpt:Y, 3gpw:K, 3gpw:Y, 6h39:K, 6h39:Y, 4hnp:K, 4hnp:Y, 4hrc:K, 4hrc:Y, 4hrd:K, 4hrd:Y, 6htb:Y, 6htb:K, 6htc:K, 6htc:Y, 6htd:K, 6htd:Y, 6htp:Y, 6htp:K, 6htr:K, 6htr:Y, 6hub:Y, 6hub:K, 6huc:K, 6huc:Y, 6huq:K, 6huq:Y, 6huu:Y, 6huu:K, 6huv:Y, 6huv:K, 6hv3:K, 6hv3:Y, 6hv4:K, 6hv4:Y, 6hv5:Y, 6hv5:K, 6hv7:K, 6hv7:Y, 6hva:Y, 6hva:K, 6hvr:Y, 6hvr:K, 6hvs:K, 6hvs:Y, 6hvt:Y, 6hvt:K, 6hvu:K, 6hvu:Y, 6hvv:K, 6hvv:Y, 6hvw:Y, 6hvw:K, 6hvx:K, 6hvx:Y, 6hvy:Y, 6hvy:K, 6hw0:Y, 6hw0:K, 6hw3:Y, 6hw3:K, 6hw4:Y, 6hw4:K, 6hw5:Y, 6hw5:K, 6hw6:Y, 6hw6:K, 6hw7:K, 6hw7:Y, 6hw8:K, 6hw8:Y, 6hw9:Y, 6hw9:K, 6hwa:Y, 6hwa:K, 6hwb:K, 6hwb:Y, 6hwc:K, 6hwc:Y, 6hwd:Y, 6hwd:K, 6hwe:Y, 6hwe:K, 6hwf:Y, 6hwf:K, 3hye:K, 3hye:Y, 4inr:K, 4inr:Y, 4int:K, 4int:Y, 4inu:K, 4inu:Y, 4j70:K, 4j70:Y, 1jd2:K, 5jhr:Y, 5jhr:K, 5jhs:K, 5jhs:Y, 4jsq:K, 4jsq:Y, 4jsu:K, 4jsu:Y, 4jt0:K, 4jt0:Y, 5l52:Y, 5l52:K, 5l54:Y, 5l54:K, 5l55:Y, 5l55:K, 5lai:K, 5lai:Y, 5laj:Y, 5laj:K, 4lqi:K, 4lqi:Y, 4ltc:K, 4ltc:Y, 3mg0:K, 3mg0:Y, 3mg4:K, 3mg4:Y, 3mg6:K, 3mg6:Y, 3mg7:K, 3mg7:Y, 3mg8:K, 3mg8:Y, 4nnn:K, 4nnn:Y, 4nnw:K, 4nnw:Y, 4no1:K, 4no1:Y, 4no6:K, 4no6:Y, 4no8:K, 4no8:Y, 4no9:K, 4no9:Y, 3nzj:K, 3nzj:Y, 3nzw:K, 3nzw:Y, 3nzx:K, 3nzx:Y, 7o2l:K, 7o2l:Y, 3oeu:K, 3oeu:Y, 3oev:K, 3oev:Y, 8ohz:K, 8ohz:Y, 8oi1:K, 8oi1:Y, 3okj:K, 3okj:Y, 8olr:K, 8olr:Y, 4qby:K, 4qby:Y, 4qlq:K, 4qlq:Y, 4qls:K, 4qls:Y, 4qlt:K, 4qlt:Y, 4qlu:K, 4qlu:Y, 4qlv:K, 4qlv:Y, 4qux:K, 4qux:Y, 4quy:K, 4quy:Y, 4qv0:K, 4qv0:Y, 4qv1:K, 4qv1:Y, 4qv3:Y, 4qv4:K, 4qv4:Y, 4qv5:K, 4qv5:Y, 4qv6:K, 4qv6:Y, 4qv7:K, 4qv7:Y, 4qv8:K, 4qv8:Y, 4qv9:K, 4qv9:Y, 4qvl:K, 4qvl:Y, 4qvm:K, 4qvm:Y, 4qvn:K, 4qvn:Y, 4qvp:K, 4qvp:Y, 4qvq:K, 4qvq:Y, 4qvv:K, 4qvv:Y, 4qvw:K, 4qvw:Y, 4qvy:K, 4qvy:Y, 4qw0:K, 4qw0:Y, 4qw1:K, 4qw1:Y, 4qw3:K, 4qw3:Y, 4qw4:K, 4qw4:Y, 4qw5:K, 4qw5:Y, 4qw6:K, 4qw6:Y, 4qw7:K, 4qw7:Y, 4qwf:K, 4qwf:Y, 4qwg:K, 4qwg:Y, 4qwi:K, 4qwi:Y, 4qwj:K, 4qwj:Y, 4qwk:K, 4qwk:Y, 4qwl:K, 4qwl:Y, 4qwr:K, 4qwr:Y, 4qws:K, 4qws:Y, 4qwu:K, 4qwu:Y, 4qwx:K, 4qwx:Y, 4qxj:K, 4qxj:Y, 4qz0:K, 4qz0:Y, 4qz1:K, 4qz1:Y, 4qz2:K, 4qz2:Y, 4qz3:K, 4qz3:Y, 4qz4:K, 4qz4:Y, 4qz5:K, 4qz5:Y, 4qz6:K, 4qz6:Y, 4qz7:K, 4qz7:Y, 4qzw:K, 4qzw:Y, 4qzx:K, 4qzx:Y, 4qzz:K, 4qzz:Y, 4r00:K, 4r00:Y, 4r02:K, 4r02:Y, 4r17:K, 4r17:Y, 4r18:K, 4r18:Y, 8rhj:K, 8rhj:Y, 8rhk:K, 8rhk:Y, 8rhl:K, 8rhl:Y, 4rur:K, 4rur:Y, 1ryp:L, 1ryp:Z, 3sdi:K, 3sdi:Y, 3sdk:K, 3sdk:Y, 3shj:K, 3shj:Y, 3tdd:K, 3tdd:Y, 3un4:K, 3un4:Y, 3un8:K, 3un8:Y, 4y69:Y, 4y69:K, 4y6a:Y, 4y6a:K, 4y6v:Y, 4y6v:K, 4y6z:K, 4y6z:Y, 4y70:K, 4y70:Y, 4y74:K, 4y74:Y, 4y75:K, 4y75:Y, 4y77:K, 4y77:Y, 4y78:K, 4y78:Y, 4y7w:K, 4y7w:Y, 4y7x:K, 4y7x:Y, 4y7y:K, 4y7y:Y, 4y80:K, 4y80:Y, 4y81:K, 4y81:Y, 4y82:K, 4y82:Y, 4y84:K, 4y84:Y, 4y8g:K, 4y8g:Y, 4y8h:K, 4y8h:Y, 4y8i:K, 4y8i:Y, 4y8j:K, 4y8j:Y, 4y8k:K, 4y8k:Y, 4y8l:K, 4y8l:Y, 4y8m:K, 4y8m:Y, 4y8n:Y, 4y8n:K, 4y8o:K, 4y8o:Y, 4y8p:K, 4y8p:Y, 4y8q:K, 4y8q:Y, 4y8r:K, 4y8r:Y, 4y8s:K, 4y8s:Y, 4y8t:K, 4y8t:Y, 4y8u:K, 4y8u:Y, 4y9y:K, 4y9y:Y, 4y9z:K, 4y9z:Y, 4ya0:K, 4ya0:Y, 4ya1:Y, 4ya1:K, 4ya2:K, 4ya2:Y, 4ya3:K, 4ya3:Y, 4ya4:Y, 4ya4:K, 4ya5:Y, 4ya5:K, 4ya7:K, 4ya7:Y, 4ya9:K, 4ya9:Y, 4z1l:Y, 4z1l:K, 2zcy:K, 2zcy:Y, 6zou:K, 6zou:Y, 6zp6:K, 6zp6:Y, 6zp8:K, 6zp8:Y
13 5wqe:A 1011 25 0.2727 0.0119 0.4800 7.0
14 4riz:C 476 34 0.2727 0.0252 0.3529 7.2 4riz:A, 4riz:D, 4rj0:D, 4rlg:A, 4rlg:B, 4rlg:D, 4rlg:C, 4rm1:B, 4rm1:C
15 3hxu:A 441 34 0.2500 0.0249 0.3235 7.7 3hxv:A, 3hxw:A, 3hxx:A, 3hxy:A, 3hxz:A, 3hxz:B, 3hxz:C, 3hxz:D, 3hy0:A, 3hy0:B, 3hy1:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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