BioLiP

>protein
MKGYTVPLSPRGIANLAPAPPWHYAGTVVGVEFFTDPAAAAATLPEGLTPDPDSAGRGVAMFIDWQYSSTGLEYLDPARS
QYREFLITLDAHCNGAPVAWCPYIYVDNDAAMARGWVQGFPKKLGAVHQTRAYSVGGPGTPVLGPGGQFGATASSAGQRI
AEAKITLEQPVPDPAALMSRPVINLRHFPRLAAGQHDQPAVHELVMSVLDDTAVSDAWVGTADLAFLPAHGEELADLPVR
RTGKGFHFDLAYTVTDLMTLAD

The query sequence (length=262) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	6eej:A	264	262	0.9962	0.9886	0.9962	0.0	6eej:B, 6eej:C, 6eej:D, 4zbt:A, 4zbt:B, 4zbt:C, 4zbt:D
2	4jmd:B	262	261	0.3855	0.3855	0.3870	5.36e-50	4jmc:A, 4jmc:B, 4jmd:A, 4jme:A, 4jme:B
3	7ane:ad	694	59	0.0840	0.0317	0.3729	0.36
4	1ss9:A	280	29	0.0534	0.0500	0.4828	0.37	1g9r:A, 1ga8:A
5	7aor:ad	801	109	0.1298	0.0424	0.3119	0.40
6	3bh3:D	245	253	0.2405	0.2571	0.2490	0.68	3bh3:A, 3bh3:B, 3bh3:C
7	2iuj:A	833	54	0.0725	0.0228	0.3519	1.1
8	6hiv:DD	791	59	0.0840	0.0278	0.3729	1.2	6hiw:DD, 6hiy:DD, 7pua:DD, 7pub:DD, 6sga:DD, 6sgb:DD
9	6eqo:A	1804	57	0.0573	0.0083	0.2632	5.2	6eqo:B
10	2xrc:B	485	29	0.0458	0.0247	0.4138	6.5	5o32:D, 5o32:H, 2xrc:A, 2xrc:D
11	2xrc:C	454	29	0.0458	0.0264	0.4138	6.8
12	7dsn:A	471	84	0.0840	0.0467	0.2619	7.5	2dh3:A, 6jmq:B
13	8an2:AAA	1040	190	0.1794	0.0452	0.2474	8.1	8an3:AAA, 7zcx:AAA
14	5zi5:A	850	73	0.0649	0.0200	0.2329	9.0	5zi5:B, 5zi7:A, 5zi7:B, 5zie:A, 5zie:B

[Back]