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BioLiP
>protein
MKCHRCGSDNVRKMVDSPVGDAWEVYVCEKCCYSWRSTENPVVMEKFKLDDNKIANMGVIPPI

The query sequence (length=63) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7ae4:a 67 63 1.0000 0.9403 1.0000 5.16e-43 7ae4:b, 7ae4:c, 7ae4:d, 7ae4:e, 7ae4:f, 7ae5:b, 7ae5:c, 7ae5:d, 7ae5:e, 7ae5:f, 7ae5:a, 7ae7:a, 7ae7:c, 7ae7:d, 7ae7:e, 7ae7:f
2 8bjd:A 208 25 0.1587 0.0481 0.4000 0.54 8bje:A, 8bk5:A, 2vcd:A
3 6cnb:B 1114 41 0.2540 0.0144 0.3902 0.77 8bws:B, 6cnc:B, 6cnd:B, 6cnf:B, 6eu0:B, 6eu1:B, 6f40:B, 6f41:B, 6f42:B, 6f44:B, 5fj8:B, 5fja:B, 6tut:B, 7z0h:B, 7z1l:B, 7z1m:B, 7z1n:B, 7z1o:B, 7z2z:B, 7z30:B, 7z31:B
4 6vfr:A 428 24 0.1587 0.0234 0.4167 2.0 6vfr:B
5 4udg:B 321 27 0.1587 0.0312 0.3704 2.1 4udg:A, 4udg:C, 4udg:D, 4udg:E, 4udg:F, 4udi:A, 4udi:B, 4udi:C, 4udi:D, 4udi:E, 4udi:F, 4udj:A, 4udj:B, 4udj:C, 4udj:D, 4udj:E, 4udj:F, 4udk:A, 4udk:B, 4udk:C, 4udk:D, 4udk:E, 4udk:F
6 7xw9:R 288 50 0.2381 0.0521 0.3000 3.6 7wkd:R, 7x1t:A, 7x1u:A
7 3sur:A 504 24 0.1429 0.0179 0.3750 3.6 3sus:A, 3sut:A, 3suu:A, 3suv:A, 3suw:A
8 7pt6:9 341 35 0.2063 0.0381 0.3714 4.3 7pt6:I, 7pt7:9
9 8shj:A 334 29 0.1429 0.0269 0.3103 5.2 8shj:B, 8t55:A, 8t55:B
10 2jbs:D 400 34 0.2222 0.0350 0.4118 5.5 2jbs:A, 2jbs:B, 2jbs:C, 2jbt:A, 2jbt:D, 2jbt:B, 2jbt:C
11 8shj:C 306 29 0.1429 0.0294 0.3103 6.3 8t55:C
12 1qyp:A 57 42 0.2222 0.2456 0.3333 6.7
13 5j55:A 480 20 0.1429 0.0187 0.4500 6.9 5j53:A, 5j54:A, 7qr6:A, 7qr6:B, 7qr6:C
14 3cng:C 178 29 0.1587 0.0562 0.3448 7.0 3cng:A, 3cng:B, 3cng:D
15 5oh7:C 82 46 0.1429 0.1098 0.1957 7.1
16 6j0x:B 466 31 0.2222 0.0300 0.4516 7.1 6j0w:A, 6j0w:B, 6j0x:A, 6j0x:C, 6j0x:D
17 6xm7:A 488 15 0.1270 0.0164 0.5333 8.2 6xm6:A, 6xm8:A, 6xm9:A, 6xma:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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