Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
MIVPVRCFSCGKVVGDKWESYLNLLQEDELDEGTALSRLGLKRYCCRRMILTHVDLIEKFLRYNP

The query sequence (length=65) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5vvr:J 70 65 1.0000 0.9286 1.0000 2.85e-44 4a3b:J, 4a3c:J, 4a3d:J, 4a3e:J, 4a3f:J, 4a3g:J, 4a3i:J, 4a3j:J, 4a3k:J, 4a3l:J, 4a3m:J, 4a93:J, 2b63:J, 2b8k:J, 4bbr:J, 4bbs:J, 6blo:J, 6blp:J, 6bm2:J, 6bm4:J, 6bqf:J, 8bws:J, 4bxx:J, 4bxz:J, 4by1:J, 4by7:J, 4c2m:J, 4c2m:Y, 4c3h:J, 4c3i:J, 4c3j:J, 5c3e:J, 5c4a:J, 5c4j:J, 5c4x:J, 8cen:J, 8ceo:J, 6cnb:J, 6cnc:J, 6cnd:J, 6cnf:J, 3cqz:J, 2e2h:J, 2e2i:J, 2e2j:J, 6eu0:J, 6eu1:J, 6eu3:J, 6f40:J, 6f41:J, 6f42:J, 5fj8:J, 5fj9:J, 5fja:J, 3fki:J, 5fmf:J, 5fyw:J, 5fz5:J, 5g5l:J, 3gtg:J, 3gtj:J, 3gtk:J, 3gtl:J, 3gtm:J, 3gto:J, 3gtp:J, 3gtq:J, 6gyk:J, 6gyl:J, 6gym:J, 3h3v:K, 6h67:J, 6h68:J, 6hko:J, 6hls:J, 3hou:J, 3hou:V, 3hov:J, 3how:J, 3hox:J, 3hoy:J, 3hoz:J, 1i3q:J, 3i4m:J, 3i4n:J, 1i50:J, 1i6h:J, 6i84:J, 5ip7:J, 5ip9:J, 3j0k:J, 2ja5:J, 2ja6:J, 2ja7:J, 2ja7:V, 2ja8:J, 9ja1:J, 8jch:J, 3k1f:J, 8k5p:J, 3k7a:J, 1k83:J, 7ked:J, 7kee:J, 7kef:J, 5lmx:J, 3m3y:J, 5m3f:J, 5m3m:J, 3m4o:J, 5m5w:J, 5m5x:J, 5m5y:J, 5m64:J, 7mei:j, 7mei:J, 7mk9:J, 7mka:j, 7ml0:J, 7ml1:J, 7ml2:J, 7ml4:J, 5n5y:J, 5n5z:J, 5n60:J, 5n61:J, 1nik:J, 7nkx:J, 2nvq:J, 2nvt:J, 2nvx:J, 2nvy:J, 2nvz:J, 7o4i:J, 7o4j:J, 6o6c:H, 7o72:J, 7o73:J, 7o75:J, 5oa1:J, 5oqj:J, 5oqm:J, 5ot2:J, 3po2:J, 3po3:J, 3qt1:J, 1r5u:J, 2r7z:J, 1r9s:J, 1r9t:J, 2r92:J, 2r93:J, 7rim:J, 7rip:J, 7riq:J, 7riw:J, 7rix:J, 7riy:J, 6rqt:J, 6ruo:J, 6rwe:J, 3rzd:J, 3rzo:J, 3s14:J, 3s15:J, 3s16:J, 3s17:J, 3s1m:J, 3s1n:J, 3s1q:J, 3s1r:J, 3s2d:J, 3s2h:J, 1sfo:J, 5sva:J, 6tps:J, 6tut:J, 8tug:J, 8tvp:J, 8tvq:J, 8tvs:J, 8tvv:J, 8tvw:J, 8tvx:J, 1twa:J, 1twc:J, 1twf:J, 1twg:J, 1twh:J, 5u5q:J, 8u9r:J, 8u9x:J, 8ukq:J, 8ukr:J, 8uks:J, 8ukt:J, 8uku:J, 6upx:J, 6upy:J, 6upz:J, 6uq0:J, 6uq1:J, 6uq2:J, 6uq3:J, 4v1m:J, 4v1n:J, 4v1o:J, 2vum:J, 5vvs:J, 5w4u:J, 5w51:J, 5w5y:J, 5w64:J, 5w65:J, 5w66:J, 1wcm:J, 4x67:J, 4x6a:J, 1y1v:J, 1y1w:J, 4y52:J, 1y77:J, 4y7n:J, 4ym7:AJ, 4ym7:BJ, 4ym7:CJ, 4ym7:DJ, 4ym7:EJ, 4ym7:FJ, 2yu9:J, 7z0h:J, 7z1l:J, 7z1m:J, 7z1n:J, 7z1o:J, 7z2z:J, 7z30:J, 7z31:J, 7zs9:J, 7zsa:J, 7zsb:J
2 7aoc:J 68 65 0.7692 0.7353 0.7692 2.52e-33 7aod:J, 7aod:V, 3h0g:J, 3h0g:V
3 7xn7:J 67 65 0.7846 0.7612 0.7846 5.06e-33 6a5l:J, 6a5o:J, 6a5p:J, 6a5r:J, 6a5t:J, 6a5u:J, 8h0v:J, 8h0w:J, 8he5:J, 6inq:J, 6ir9:J, 6j4w:J, 6j4x:J, 6j4y:J, 6j4z:J, 6j50:J, 6j51:J, 8jh2:J, 8jh3:J, 8jh4:J, 7wbv:J, 7wbw:J, 7wbx:J, 5x4z:J, 5x4z:V, 5x50:J, 5x51:J, 5x51:V, 5xog:J, 5xon:J, 7xse:J, 7xsx:J, 7xsz:J, 7xt7:J, 7xtd:J, 7xti:J, 8yfq:J, 8yfr:J
4 7b0y:J 67 65 0.7231 0.7015 0.7231 2.27e-30 8a3y:J, 7a6h:J, 7ae1:J, 7ae3:J, 7aea:J, 8b3d:J, 8b3f:J, 8bvw:J, 8byq:J, 8bz1:J, 7d58:J, 7d59:J, 7dn3:J, 6drd:J, 7du2:J, 7edx:x, 7eg7:x, 7eg8:x, 7eg9:x, 7ega:x, 7egb:x, 7egc:x, 7ena:PJ, 7enc:PJ, 6exv:J, 7f4g:J, 7fji:J, 7fjj:J, 5flm:J, 6gmh:J, 6gml:J, 8gxq:PJ, 8gxs:PJ, 8ity:J, 8iue:J, 8iuh:J, 5iy6:J, 5iy8:J, 5iy9:J, 5iya:J, 5iyb:J, 5iyc:J, 5iyd:J, 7lbm:J, 7nvr:J, 7nvs:J, 7nvt:J, 7nvu:J, 7nvy:J, 7nvz:J, 7nw0:J, 6o9l:J, 7ob9:J, 7oba:J, 7obb:J, 8oeu:J, 8oev:J, 8oew:J, 8of0:J, 5oik:J, 7okx:J, 7oky:J, 7ol0:J, 7oo3:J, 7oob:J, 7oop:J, 7opc:J, 7opd:J, 7ozn:J, 7ozn:V, 7ozo:J, 7ozo:V, 7ozp:J, 7ozp:V, 8p4a:J, 8p4b:J, 8p4e:J, 8p4f:J, 7pks:J, 8rbx:J, 8s51:J, 8s52:J, 8s54:J, 8s55:J, 8s5n:J, 6ted:J, 8uha:J, 8uhd:J, 8uhg:J, 8ui0:J, 8uis:J, 7unc:J, 7und:J, 7vba:J, 7vbb:J, 7vbc:J, 8wak:x, 8wal:x, 8wan:x, 8wao:x, 8wap:x, 8waq:x, 8war:x, 8was:x, 8wat:x, 8wau:x, 8wav:x, 8waw:x, 8wax:x, 8way:x, 8waz:x, 8wb0:x, 7ycx:8, 7zwd:J, 7zx7:J, 7zx8:J
5 8hil:J 64 65 0.6769 0.6875 0.6769 3.41e-29 7eu0:J, 7eu1:J, 8him:J, 8hyj:J, 8xmc:J
6 7ok0:N 66 64 0.4923 0.4848 0.5000 2.24e-20 7oq4:N
7 4ayb:N 65 64 0.4308 0.4308 0.4375 4.45e-20 3hkz:N, 3hkz:W, 2pmz:N, 2pmz:Y, 4v8s:AO, 4v8s:BN, 2waq:N, 2wb1:N, 2wb1:O, 2y0s:N, 2y0s:O
8 8cro:N 65 64 0.5231 0.5231 0.5312 2.66e-19 8oki:N, 8orq:N, 8p2i:N, 8rbo:N
9 9bct:N 65 64 0.4923 0.4923 0.5000 2.61e-18 9bcu:N, 6kf4:N, 4qiw:N, 4qiw:V
10 1ef4:A 55 54 0.4000 0.4727 0.4815 4.32e-12
11 8q3b:J 80 75 0.3231 0.2625 0.2800 0.11 8q3k:J
12 4ltu:A 106 51 0.2769 0.1698 0.3529 0.14 4ltu:B
13 5xgd:A 548 32 0.1846 0.0219 0.3750 3.2 8pps:A, 8pps:B, 5xge:A
14 8gzr:A 880 21 0.1385 0.0102 0.4286 3.4 8bcr:A, 8bcr:B, 4c11:B, 5ccv:E, 4ctj:A, 4ctj:C, 4ctk:A, 4ctk:C, 5cuq:A, 5cuq:B, 5e9q:A, 5e9q:C, 5ec8:A, 5ec8:C, 5ehg:A, 5ehg:C, 5ehi:A, 5ehi:C, 5eif:A, 5eif:C, 5eiw:A, 5eiw:C, 5ekx:A, 5ekx:B, 3p8z:A, 3p8z:C, 3p97:A, 3p97:C, 4r8s:A, 4r8s:B, 3vws:A, 2xbm:B, 2xbm:A, 2xbm:C, 2xbm:D, 6xd1:A
15 8gr7:A 326 44 0.2154 0.0429 0.3182 6.1 8gr7:B
16 8uxh:A 4004 37 0.1846 0.0030 0.3243 6.6 8uxh:B, 8uxh:C, 8uxh:D, 8uxi:A, 8uxi:B, 8uxi:C, 8uxi:D
17 8uxl:A 4232 37 0.1846 0.0028 0.3243 6.7 7u9q:A, 7u9q:D, 7u9q:B, 7u9q:C, 7u9r:A, 7u9r:D, 7u9r:B, 7u9r:C, 7u9t:A, 7u9t:D, 7u9t:B, 7u9t:C, 7u9x:A, 7u9x:B, 7u9x:C, 7u9x:D, 7u9z:A, 7u9z:B, 7u9z:C, 7u9z:D, 7ua1:A, 7ua1:B, 7ua1:C, 7ua1:D, 7ua5:A, 7ua5:B, 7ua5:C, 7ua5:D, 7ua9:A, 7ua9:B, 7ua9:C, 7ua9:D, 8uq2:A, 8uq2:B, 8uq2:C, 8uq2:D, 8uq3:A, 8uq3:B, 8uq3:C, 8uq3:D, 8uq4:A, 8uq4:B, 8uq4:C, 8uq4:D, 8uq5:A, 8uq5:B, 8uq5:C, 8uq5:D, 8uxc:A, 8uxc:B, 8uxc:C, 8uxc:D, 8uxe:A, 8uxe:B, 8uxe:C, 8uxe:D, 8uxf:A, 8uxf:B, 8uxf:C, 8uxf:D, 8uxg:A, 8uxg:B, 8uxg:C, 8uxg:D, 8uxl:B, 8uxl:C, 8uxl:D, 8uxm:A, 8uxm:B, 8uxm:C, 8uxm:D
18 1qs2:A 401 33 0.1846 0.0299 0.3636 7.7
19 4r94:A 248 20 0.1846 0.0484 0.6000 8.1 3wrn:A, 3wro:A, 3wrr:A, 3wrs:A
20 7ua3:A 4443 37 0.1846 0.0027 0.3243 8.7 7ua3:B, 7ua3:C, 7ua3:D, 7ua4:A, 7ua4:B, 7ua4:C, 7ua4:D
21 8fvu:A 1361 15 0.1385 0.0066 0.6000 9.6 2vm5:A
22 2yrj:A 46 34 0.1846 0.2609 0.3529 9.8

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218