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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
MIKLSQPQIPEFAIEKVADILRGGQLVHGDECNLFEQELAEYLGVKHALVVSNGTAALHLALLALNIGPGDAVIVPDFTF
TATANIVEMVGAKAIIVDVDKTSYNLDPQKLQACINEWQGPETLKAIMPVLEFGNPTHLNAYRDIAKQHGLFMIEDAACA
LGASEQGTMVGTAAEFGCFSFHPRATLTTGEGGAVVTNDTELYNKVALLRSHGMQRTGVVFKCVGLNYRLTNFQGAIGRA
ILPELNQWIAKRRELANQYRELLAPLVEVGKLTLPSIVEGHSVQTYMTVLADNFERSDVIEALRSKQVESNLGAQSMSSL
GLFNHKYNTEQQYPEGTRLYTHGLALPLHEGMNAEDVATVVSALTEVLEHA

The query sequence (length=371) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 9bgr:B 371 371 1.0000 1.0000 1.0000 0.0 9bgr:A
2 8vr5:B 376 370 0.6765 0.6676 0.6784 1.16e-178 8vr3:B, 8vr5:A, 8vr5:C, 8vr5:D
3 3bn1:A 368 339 0.3558 0.3587 0.3894 3.81e-66 3bn1:B, 3dr4:A, 3dr4:B, 3dr4:C, 3dr4:D, 3dr7:A, 3dr7:B, 3dr7:C, 3dr7:D
4 3nu7:B 359 374 0.3423 0.3538 0.3396 1.98e-53 3nu7:A, 3nub:A, 3nub:B, 3nys:A, 3nyt:A
5 4qgr:A 376 259 0.2722 0.2686 0.3900 1.37e-49 4qgr:B
6 3frk:A 365 369 0.3046 0.3096 0.3062 8.25e-49 3frk:B
7 2oga:A 371 365 0.3261 0.3261 0.3315 3.36e-46 2oga:B, 2oga:C, 2oga:D
8 8snj:A 370 374 0.2776 0.2784 0.2754 1.28e-45 8sng:A, 8sng:B, 8snj:B, 8snj:C, 8snj:D, 8snj:E, 8snj:F, 8su6:A, 8su6:B
9 1mdx:A 366 371 0.2965 0.3005 0.2965 1.54e-45 1mdo:A, 1mdz:A, 4oca:A
10 7l7x:AAA 395 392 0.3181 0.2987 0.3010 2.91e-45 7l7x:BBB
11 8e77:A 358 351 0.2992 0.3101 0.3162 1.13e-44
12 5k8b:A 394 247 0.2507 0.2360 0.3765 5.70e-44 5k8b:B, 5k8b:C, 5k8b:D
13 4zah:A 370 377 0.3019 0.3027 0.2971 6.12e-44 4zah:B, 4zah:C, 4zah:D, 4zah:E, 4zah:F, 4zah:G, 4zah:H
14 2fni:A 374 374 0.3019 0.2995 0.2995 2.89e-41 2fni:B, 2fnu:A, 2fnu:B
15 7n63:A 362 359 0.2938 0.3011 0.3036 4.32e-41
16 6ewq:C 402 410 0.2938 0.2711 0.2659 2.48e-38 6ewq:A, 6ewq:B, 6ewq:D, 6ewr:A, 6ewr:B, 6ewr:C, 6ewr:D
17 1b9h:A 384 239 0.2668 0.2578 0.4142 2.70e-38 1b9i:A
18 5uid:A 367 366 0.2857 0.2888 0.2896 5.07e-38 5uid:D
19 7kz3:D 439 376 0.3127 0.2642 0.3085 3.05e-37 7kz5:A, 7kz5:B, 7kz5:C, 7kz5:D, 7kz6:A, 7kz6:B, 7kz6:C, 7kz6:D, 7kzd:A, 7kzd:B, 7kzd:C, 7kzd:D, 7kzd:E, 7kzd:H, 7kzd:F, 7kzd:G
20 4ztc:A 385 390 0.2776 0.2675 0.2641 5.80e-37 1o61:A, 1o61:B, 1o69:A, 1o69:B
21 4k2m:A 442 365 0.2803 0.2353 0.2849 5.86e-36 4k2i:A, 4k2i:B, 4k2m:B
22 3uwc:A 371 358 0.2695 0.2695 0.2793 1.29e-35
23 5w71:A 413 348 0.2857 0.2567 0.3046 1.03e-33 2c7t:A, 2c81:A, 5w71:B
24 3bb8:A 420 369 0.2749 0.2429 0.2764 7.24e-33 3bb8:B
25 5w70:A 414 257 0.2426 0.2174 0.3502 1.10e-30 5w70:B
26 2po3:A 393 337 0.2722 0.2570 0.2997 1.95e-30 2po3:B
27 5u23:D 366 247 0.2129 0.2158 0.3198 2.44e-30 5u21:A, 5u21:B, 5u21:C, 5u21:D, 5u23:C, 5u23:A, 5u23:B, 5u24:A, 5u24:B, 5u24:C, 5u24:D
28 8gyj:B 428 276 0.2642 0.2290 0.3551 3.51e-28 8gyi:A, 8gyi:B, 8gyj:A
29 2gms:A 390 332 0.2372 0.2256 0.2651 6.40e-26 3b8x:A, 3b8x:B, 2gms:B, 2gmu:A, 2gmu:B, 3gr9:A, 3gr9:B, 3gr9:C, 3gr9:D, 3gr9:E, 3gr9:F, 3gr9:G, 3gr9:H, 2r0t:A, 2r0t:B
30 4zas:A 369 279 0.2453 0.2466 0.3262 3.47e-24 4zas:B, 4zas:D, 4zas:E, 4zas:F
31 4xau:C 374 272 0.2291 0.2273 0.3125 2.54e-23
32 7mfp:B 354 269 0.1806 0.1893 0.2491 1.62e-05 7mfo:A, 7mfo:B, 7mfo:C, 7mfo:D, 7mfo:E, 7mfo:F, 7mfo:G, 7mfo:H, 7mfo:I, 7mfo:J, 7mfp:A, 7mfp:C, 7mfp:D, 7mfq:A, 7mfq:B, 7mfq:C, 7mfq:D
33 1v2e:A 368 159 0.1348 0.1359 0.3145 3.47e-05 1v2d:A, 1v2e:B, 1v2f:A, 1v2f:B
34 6f35:A 400 69 0.0512 0.0475 0.2754 0.005 6f35:B
35 6hnu:B 480 115 0.0809 0.0625 0.2609 0.011 6hnu:A
36 8v4a:A 466 104 0.0863 0.0687 0.3077 0.011 9bnj:A, 9bnj:B, 9bnj:C, 9bnj:D, 8v2k:A, 8v2k:B, 8v2k:C, 8v2k:D, 8v4a:B, 8v4a:C, 8v4a:D, 8v6p:A, 8v6p:B, 8v6p:C, 8v6p:D, 8v9p:A, 8v9p:B, 8v9p:C, 8v9p:D, 5w19:A, 5w19:B, 5w19:C, 5w19:D
37 2zc0:A 405 156 0.1267 0.1160 0.3013 0.013 2zc0:B, 2zc0:C, 2zc0:D
38 5o5c:B 468 83 0.0755 0.0598 0.3373 0.020 5o5c:A, 5o5c:C, 5o5c:D, 5o5c:E, 5o5c:F
39 4l4x:A 503 74 0.0593 0.0437 0.2973 0.065
40 1j32:A 388 119 0.0755 0.0722 0.2353 0.073 1j32:B
41 6hnd:B 470 101 0.0728 0.0574 0.2673 1.6 6hnd:A, 6hnv:A, 6hnv:B
42 5wml:A 404 87 0.0728 0.0668 0.3103 1.9 6f5v:A, 6f5v:B, 6f5v:C, 6f5v:D, 5wmh:A, 5wmh:B, 5wmh:C, 5wmh:D, 5wmh:E, 5wmh:F, 5wmi:A, 5wml:B
43 6ld8:A 388 181 0.1186 0.1134 0.2431 1.9 6ld8:D, 6ld8:B, 6ld8:C, 6ld9:A, 6ld9:B, 6ld9:C, 6ld9:D, 6lgo:A, 6lgo:B, 6lgo:C, 6lgo:D
44 6s8w:C 470 98 0.0593 0.0468 0.2245 3.0
45 8tj5:M 1659 45 0.0458 0.0102 0.3778 3.0 8tj5:O
46 3mpb:B 227 112 0.0782 0.1278 0.2589 3.3 3kmh:A, 3kmh:B, 3mpb:A
47 6s8w:B 491 98 0.0593 0.0448 0.2245 3.5 6s8w:A, 6s8w:D
48 9boh:A 402 77 0.0539 0.0498 0.2597 3.8 9boh:B, 9bow:A, 9bow:B, 9bpe:A, 9bpe:B, 2dkj:A, 2dkj:B, 8ssy:A, 8ssy:B, 8sui:B
49 3zyy:X 628 57 0.0431 0.0255 0.2807 5.2 4c1n:J, 4c1n:I, 4c1n:K, 4c1n:X, 3zyy:Y
50 4qqf:F 191 44 0.0404 0.0785 0.3409 5.4 3qle:A
51 3qhx:A 377 39 0.0404 0.0398 0.3846 6.3 3qhx:B
52 3dyd:A 388 90 0.0593 0.0567 0.2444 6.7 3dyd:B
53 1xi9:C 393 98 0.0701 0.0662 0.2653 6.7 1xi9:A, 1xi9:B, 1xi9:D
54 1q7t:A 310 33 0.0323 0.0387 0.3636 8.2 4ewl:A, 4ewl:B, 1q74:A, 1q74:B, 1q74:C, 1q74:D, 1q7t:B
55 4bmk:A 398 161 0.1051 0.0980 0.2422 8.5 4bmk:B, 2jg2:A, 2w8j:A, 2w8t:A, 2w8u:A, 2w8v:A, 2w8w:A, 2xbn:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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