BioLiP

>protein
MIIVSGQLLRPQNWQIDQDLNPLLKEMIETPVQFDYHSIAELMFELKLRMNIVAAAKTLHKSGAKFATFLKTYGNTTYWR
VSPEGALELKYRMPPSKAIRDIAENGPFYAFECATAIVIIYYLALIDTIGEDKFNASFDRIILYDWHYEKLPIYTETGHH
FFLGDCLYFKNPEFDPQKAQWRGENVILLGEDKYFAHGLGILNGKQIIDKLNSFRKKGALQSAYLLSQATRLDVPSLFRI
VR

The query sequence (length=242) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	4pa5:A	242	242	1.0000	1.0000	1.0000	0.0
2	3ib7:A	295	57	0.0826	0.0678	0.3509	0.41	2hy1:A, 2hyo:A, 2hyp:A, 3ib8:A
3	2xb3:A	155	58	0.0620	0.0968	0.2586	1.2
4	6fvj:B	212	173	0.1818	0.2075	0.2543	4.4	6fvj:A, 6fvj:C, 6fvj:F, 6fvj:G, 6fvj:H, 6fw5:C
5	4f9b:A	318	38	0.0620	0.0472	0.3947	4.8	4f99:A, 4f9a:A, 4f9a:C, 4f9b:C, 4f9c:A
6	6ya7:A	350	38	0.0620	0.0429	0.3947	5.3	6ya6:A, 6ya8:A
7	6b5z:A	252	29	0.0455	0.0437	0.3793	7.1	6b5z:B, 6b60:A, 6b60:B, 6b61:A, 6b61:B, 6b62:A, 6b62:B, 6b63:A, 6b63:B, 6b64:A, 6b64:B, 6b65:A, 6b65:B, 6b66:A, 6b66:B, 1lbx:A, 1lbx:B, 1lby:A, 1lby:B, 1lbz:A, 1lbz:B
8	1pfu:A	547	123	0.1322	0.0585	0.2602	7.5	8bru:A, 8brv:A, 8brw:A, 8brx:A, 1f4l:A, 3h97:A, 3h99:A, 3h9b:A, 3h9c:A, 1p7p:A, 1pfv:A, 1pfw:A, 1pfy:A, 1qqt:A, 6spn:A, 6spo:A, 6spp:A, 6spq:A, 6spr:A
9	2cfm:A	561	79	0.0992	0.0428	0.3038	7.7
10	1pg0:A	492	123	0.1322	0.0650	0.2602	8.3	1pg2:A

[Back]