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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
MIAGSMVALVTPFDAQGRLDWDSLAKLVDFHLQDGTNAIVAVGTTGESATLDVEEHIQVVRRVVDQVKGRIPVIAGTGAN
STREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSKVPNIIGI
KEATGDLQRAKEVIERVGKDFLVYSGDDATAVELMLLGGKGNISVTANVAPRAMSDLCAAAMRGDAAAARAINDRLMPLH
KALFIESNPIPVKWALHEMGLIPEGIRLPLTWLSPHCHDPLRQAMRQTGVLA

The query sequence (length=292) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3puo:A 292 292 1.0000 1.0000 1.0000 0.0 3puo:B, 3s8h:A, 3s8h:B
2 4dxv:A 291 290 0.6027 0.6048 0.6069 1.06e-130 3pue:B, 3pul:B, 3rk8:A, 3rk8:B, 3tak:A, 3tak:B, 3tce:A, 3tce:B, 3tdf:A, 3tdf:B, 3u8g:A, 3u8g:B
3 5t25:A 293 292 0.5719 0.5700 0.5719 4.10e-119 2ats:A, 2ats:B, 3i7s:A, 3i7s:B, 7jz8:A, 7jz8:B, 7jza:A, 7jza:B, 7jzb:A, 7jzb:B, 7jzg:A, 7jzg:B, 5t25:B, 1yxd:A, 1yxd:B
4 4pfm:A 295 288 0.5582 0.5525 0.5660 4.41e-113 4pfm:B
5 1o5k:A 295 295 0.4486 0.4441 0.4441 3.51e-88
6 4i7w:A 294 293 0.4555 0.4524 0.4539 1.52e-82 4i7w:B
7 7kkd:B 306 293 0.4281 0.4085 0.4266 1.88e-75 5f1u:A, 5f1u:B, 5f1u:C, 5f1u:D, 5f1v:A, 5f1v:C, 5f1v:B, 5f1v:D, 7kg2:A, 7kg2:C, 7kg2:B, 7kg2:D, 7kg2:E, 7kg2:F, 7kg5:A, 7kg5:B, 7kg5:C, 7kg5:E, 7kg5:F, 7kg9:A, 7kg9:E, 7kg9:B, 7kg9:C, 7kg9:D, 7kg9:F, 7kh4:A, 7kh4:F, 7kh4:B, 7kh4:C, 7kh4:D, 7kh4:E, 7kk1:A, 7kk1:B, 7kk1:C, 7kk1:D, 7kk1:E, 7kk1:F, 7kkd:A, 7kkd:F, 7kkd:E, 7kkd:C, 7kkd:D, 7kkg:A, 7kkg:D, 7kkg:B, 7kkg:E, 7kkg:C, 7kkg:F, 7kkt:A, 7kkt:F, 7kkt:B, 7kkt:E, 7kkt:C, 7kkt:D, 7kls:A, 7kls:F, 7kls:B, 7kls:C, 7kls:D, 7kls:E, 7klt:A, 7klt:C, 7klt:E, 7klt:F, 7kly:A, 7kly:D, 7kly:B, 7kly:C, 7kly:E, 7kly:F, 7km0:B, 7km0:C, 7km0:A, 7km0:D, 7km0:E, 7km0:F, 7km1:A, 7km1:B, 7km1:C, 7km1:D, 7km1:E, 7km1:F, 7kn9:A, 7kn9:B, 7kn9:C, 7kn9:D, 7kn9:E, 7kn9:F, 7knz:B, 7knz:C, 7knz:A, 7knz:D, 7knz:E, 7knz:F, 7ko3:A, 7ko3:B, 7ko3:C, 7ko3:D, 7ko3:E, 7ko3:F, 7kpc:A, 7kpc:B, 7kpc:C, 7kpc:D, 7kpc:E, 7kpc:F, 7kpe:B, 7kpe:C, 7kpe:A, 7kpe:D, 7kpe:E, 7kpe:F, 7kr7:A, 7kr7:E, 7kr7:B, 7kr7:C, 7kr7:D, 7kr7:F, 7kr8:B, 7kr8:D, 7kto:A, 7kto:B, 7kto:C, 7kto:D, 7kto:E, 7kto:F, 7ku6:D, 7kuz:A, 7kuz:F, 7kuz:B, 7kuz:C, 7kuz:D, 7kuz:E, 7kwf:B, 7kwf:F, 7kwf:A, 7kwf:C, 7kwf:D, 7kwf:E, 7kwn:B, 7kwp:A, 7kwp:B, 7kwp:C, 7kwp:D, 7kwp:E, 7kwp:F, 7kx1:A, 7kxg:A, 7kxg:C, 7kxg:B, 7kxg:D, 7kxg:E, 7kxg:F, 7kxh:A, 7kxh:D, 7kxh:B, 7kxh:C, 7kxh:E, 7kxh:F, 7kz2:A, 7kz2:D, 7kz2:B, 7kz2:C, 7kz2:E, 7kz2:F, 7lcf:A, 7lcf:B, 7lcf:F, 7lcf:C, 7lcf:D, 7lcf:I, 7lcf:E, 7lcf:G, 7lcf:H, 7lcf:J, 7lcf:K, 7lcf:L, 7m06:B, 7m06:C, 7m06:D, 4m19:A, 4m19:B, 4m19:C, 4m19:D, 4mlr:A, 4mlr:D, 4mlr:C, 4mlr:E, 4mlr:F, 4mlr:G, 4mlr:H, 6u01:B
8 5ktl:A 295 287 0.4041 0.4000 0.4111 6.94e-73 5ktl:B
9 7lvl:A 296 295 0.4178 0.4122 0.4136 4.57e-72 7lvl:B, 7lvl:C, 7lvl:E, 7lvl:D, 7lvl:F, 7mjf:A, 7mjf:B, 7mjf:C, 7mjf:D, 7mjf:E, 7mjf:F
10 3di1:B 291 288 0.4041 0.4055 0.4097 6.46e-67 3di1:A
11 4fha:A 307 266 0.3767 0.3583 0.4135 1.94e-65 4fha:B
12 5ud6:C 299 292 0.4110 0.4013 0.4110 1.10e-62 5ud6:A, 5ud6:B, 5ud6:D
13 5j5d:A 297 286 0.3596 0.3535 0.3671 8.25e-55 3l21:B, 1xxx:A, 1xxx:B, 1xxx:C, 1xxx:D, 1xxx:E, 1xxx:F, 1xxx:G, 1xxx:H
14 6vvh:BBB 313 265 0.3425 0.3195 0.3774 1.39e-48 4dpq:A, 4dpq:B, 7mds:A, 7mds:B, 6vvh:AAA, 6vvh:CCC, 6vvh:DDD
15 4hnn:F 320 265 0.3116 0.2844 0.3434 8.20e-43 4hnn:A, 4hnn:B, 4hnn:C, 4hnn:D, 4hnn:E, 4hnn:G, 4hnn:H
16 3nev:A 298 241 0.2705 0.2651 0.3278 2.69e-39 3nev:B, 3nev:C, 3nev:D, 4oe7:A, 4oe7:B, 4oe7:C, 4oe7:D, 4onv:A, 4onv:B, 4onv:C, 4onv:D, 4ptn:A, 4ptn:B, 4ptn:C, 4ptn:D, 4u4m:A, 4u4m:B, 4u4m:C, 4u4m:D
17 5ui3:C 306 287 0.3151 0.3007 0.3206 2.41e-38 5ui3:D, 5ui3:A, 5ui3:B
18 3na8:A 291 274 0.3048 0.3058 0.3248 3.42e-36 3na8:B, 3na8:C, 3na8:D
19 8u8w:A 297 231 0.2603 0.2559 0.3290 9.79e-36
20 2wpb:A 302 281 0.2877 0.2781 0.2989 8.85e-35 4bwl:A, 4bwl:B, 4bwl:C, 4bwl:D, 1fdy:A, 1fdy:B, 1fdy:C, 1fdy:D, 1fdz:A, 1fdz:B, 1fdz:C, 1fdz:D, 1hl2:A, 1hl2:B, 1hl2:C, 1hl2:D, 3lbc:D, 3lcw:A, 3lcw:B, 3lcw:C, 3lcw:D, 4uui:A, 4uui:B, 4uui:C, 4uui:D, 2wkj:C, 2wkj:D, 2wpb:B, 2wpb:C, 2wpb:D, 2xfw:A, 2xfw:B, 2xfw:C, 2xfw:D
21 5c55:A 307 243 0.2295 0.2182 0.2757 1.32e-25 5c55:B
22 4img:A 293 243 0.2226 0.2218 0.2675 1.27e-20 4imf:A, 4imf:B, 4img:B
23 5hwn:B 310 236 0.2432 0.2290 0.3008 1.24e-19 5hwm:A, 5hwm:B, 5hwm:C, 5hwm:D, 5hwn:A, 5hwn:C, 5hwn:D, 4ur8:A, 4ur8:B, 4ur8:C, 4ur8:D
24 4woq:C 290 292 0.2534 0.2552 0.2534 1.27e-19 4woq:D, 4woq:E, 4woq:F, 4woq:H, 4woz:B, 4woz:F
25 1f74:A 293 243 0.2192 0.2184 0.2634 4.23e-19 1f73:A, 1f73:B, 1f73:C, 1f73:D, 1f74:C, 1f7b:A, 1f7b:C
26 6rb7:A 305 230 0.1781 0.1705 0.2261 1.16e-16 6rb7:B, 6rb7:E, 6rb7:F, 6rd1:A, 6rd1:B
27 3qfe:A 305 287 0.2603 0.2492 0.2648 2.14e-16
28 5kzd:A 284 235 0.2123 0.2183 0.2638 1.15e-15 5kzd:B, 5kzd:C, 5kzd:D
29 8do5:B 324 168 0.1747 0.1574 0.3036 1.25e-14 8do5:A
30 2hmc:A 314 256 0.2637 0.2452 0.3008 7.20e-14
31 2r94:A 286 226 0.2055 0.2098 0.2655 7.91e-14 2r94:D, 2r94:B, 2r94:C
32 6g3z:A 293 219 0.1678 0.1672 0.2237 1.11e-11 6g3z:B, 6gt8:A, 6gt8:B, 6gv2:A, 6gv2:B, 6h2s:A, 6h2s:B, 6h2s:C, 6h2s:D, 6h7s:A, 6h7s:B, 1w3i:A, 1w3i:B, 1w3i:C, 1w3i:D, 1w3n:A, 1w3n:B, 1w3n:C, 1w3n:D, 1w3t:A, 1w3t:B, 1w3t:C, 1w3t:D
33 2nuy:A 288 232 0.1986 0.2014 0.2500 2.33e-11 2nuy:B
34 2chq:A 313 62 0.0651 0.0607 0.3065 0.59 2chg:A, 2chg:B, 2chg:C, 2chg:D, 2chq:B, 2chq:C
35 2xc8:B 127 80 0.0753 0.1732 0.2750 0.87
36 7m8i:A 572 43 0.0582 0.0297 0.3953 1.1 1ayf:A, 1ayf:B, 2bt6:A, 2bt6:B, 1cje:A, 1cje:B, 1cje:C, 1cje:D, 4dvq:A, 4dvq:B, 4dvq:C, 4dvq:D, 4dvq:E, 4dvq:F, 4dvq:G, 4dvq:H, 4dvq:I, 4dvq:J, 4dvq:K, 4dvq:L, 1e6e:D, 7e7f:A, 4fdh:A, 4fdh:B, 4fdh:C, 4fdh:D, 4fdh:E, 4fdh:F, 4fdh:G, 4fdh:H, 4fdh:I, 4fdh:J, 4fdh:K, 4fdh:L, 2jqr:B, 1l6v:A, 6m7x:A, 6m7x:B, 7m8i:B, 7m8i:C, 7m8v:A, 7m8v:B, 7m8v:C, 7m8v:D, 7m8v:E, 7m8v:F, 7m8v:G, 7m8v:H, 7m8v:I, 7m8v:J, 7m8v:K, 7m8v:L, 3n9y:C, 3n9y:D, 6xz8:A, 6xz8:B, 6xz8:C, 6xz9:A, 6xz9:B, 6xz9:C, 4zgx:A, 4zgx:B, 4zgx:C, 4zgx:D, 4zgx:E, 4zgx:F, 4zgx:G, 4zgx:H, 4zgx:I, 4zgx:J, 4zgx:K, 4zgx:L
37 4y9d:A 235 40 0.0548 0.0681 0.4000 1.1
38 7cxz:A 245 38 0.0411 0.0490 0.3158 3.1
39 4nbt:A 239 94 0.0856 0.1046 0.2660 3.4 4nbt:B, 4nbt:C, 4nbt:D
40 6egr:A 396 136 0.1130 0.0833 0.2426 3.4 5d5s:A, 5e4z:A, 4hf8:A, 3jw9:A, 3jwa:A, 3jwb:A, 5k30:A, 5m3z:A, 3mkj:A, 4oma:A, 6s0c:A
41 7pc5:A 405 44 0.0445 0.0321 0.2955 4.4
42 1rtw:B 209 45 0.0479 0.0670 0.3111 4.7 1rtw:A, 1rtw:C, 1rtw:D
43 6xyw:Ax 99 30 0.0479 0.1414 0.4667 5.1
44 8q3v:F 67 48 0.0548 0.2388 0.3333 5.2 8q3v:V, 8q3v:f, 8q54:V, 8q54:F, 8q54:f
45 5duf:A 245 37 0.0616 0.0735 0.4865 8.6 5dtw:A, 5dtw:D, 5du4:A, 5du6:A, 5du6:B, 5du6:C, 5du8:A, 5du8:B, 5du8:C, 5duc:A, 5duc:B, 5duc:C
46 5xya:A 1358 52 0.0616 0.0133 0.3462 8.9 5xxz:A
47 8tn3:A 388 57 0.0582 0.0438 0.2982 9.0 8tn3:B, 7uky:A, 7uky:B
48 6vjb:A 1346 52 0.0616 0.0134 0.3462 9.0
49 7edd:A 1394 52 0.0616 0.0129 0.3462 9.0 5xyr:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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