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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
MGPNPMKMYPIEGNKSVQFIKPILEKLENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGA
NHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNP
ANEIKQRFDQDTINQLLDIKWWNWPIDIINENIDKILDNSIIRE

The query sequence (length=204) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1khr:A 206 204 1.0000 0.9903 1.0000 1.30e-148 3dho:A, 3dho:C, 3dho:B, 3dho:D, 3dho:F, 3dho:E, 1khr:B, 1khr:C, 1khr:D, 1khr:E, 1khr:F, 1kk4:A, 1kk4:B, 1kk4:C, 1kk4:D, 1kk4:E, 1kk4:F, 1mr9:A, 1mr9:C, 1mr9:B, 1mr9:X, 1mr9:Z, 1mr9:Y, 1mrl:A, 1mrl:B, 1mrl:C
2 4hus:A 212 200 0.6078 0.5849 0.6200 3.39e-90 4hur:A, 4hur:B, 4hur:C, 4hus:C, 6x3c:A, 6x3c:F, 6x3c:B, 6x3c:C, 6x3c:D, 6x3c:E, 6x3j:A, 6x3j:B, 6x3j:D, 6x3j:C, 6x3j:E, 6x3j:F
3 6pub:A 210 178 0.4020 0.3905 0.4607 1.17e-44 6u9c:A, 6u9c:B, 6u9c:C
4 8j40:A 209 161 0.3480 0.3397 0.4410 1.06e-41
5 6pxa:E 221 195 0.4167 0.3846 0.4359 3.97e-39 6pxa:A, 6pxa:B, 6pxa:C, 6pxa:D, 6pxa:F, 6pxa:G, 6pxa:H, 6pxa:I, 6pxa:J, 6pxa:K, 6pxa:L, 5ux9:A, 5ux9:B, 5ux9:C, 5ux9:D
6 2xat:A 208 160 0.3088 0.3029 0.3937 5.17e-34
7 7uuk:C 276 149 0.2304 0.1703 0.3154 2.06e-16 7jm1:A, 7jm1:C, 7jm1:B, 7jm2:A, 7jm2:C, 7jm2:B, 7uuj:A, 7uuj:C, 7uuj:B, 7uuk:A, 7uuk:B, 7uul:A, 7uul:B, 7uul:D, 7uul:C, 7uul:F, 7uul:E, 7uum:A, 7uun:A, 7uuo:B
8 3igj:C 188 106 0.1912 0.2074 0.3679 2.28e-12 3igj:A, 3igj:B
9 1kru:A 201 124 0.2206 0.2239 0.3629 3.56e-12 1kqa:A, 1kqa:B, 1kqa:C, 1krr:A, 1krr:B, 1krr:C, 1kru:B, 1kru:C, 1krv:A, 1krv:C, 1krv:B
10 5u2k:A 190 90 0.1618 0.1737 0.3667 3.84e-11 5v0z:A, 5v0z:C, 5v0z:B, 3v4e:A, 3v4e:C, 3v4e:B
11 4isx:A 186 51 0.1324 0.1452 0.5294 3.23e-10 4isx:B
12 3nz2:J 185 51 0.1324 0.1459 0.5294 3.23e-09 3ect:A, 3nz2:A, 3nz2:C, 3nz2:B, 3nz2:D, 3nz2:E, 3nz2:F, 3nz2:G, 3nz2:H, 3nz2:I, 3nz2:K, 3nz2:L
13 8vr7:E 180 51 0.1176 0.1333 0.4706 4.90e-07 8vr6:A, 8vr7:A, 8vr7:B, 8vr7:C, 8vr7:D, 8vr7:F
14 2wle:C 211 108 0.1569 0.1517 0.2963 8.89e-06 2wle:A, 2wle:B, 2wlf:A, 2wlf:C, 2wlf:B, 2wlg:A, 2wlg:C, 2wlg:B
15 4n69:A 243 49 0.1127 0.0947 0.4694 2.79e-05 4n69:B, 4n6b:A, 4n6b:E, 4n6b:B, 4n6b:C, 4n6b:D, 4n6b:F
16 7s3u:A 145 106 0.1765 0.2483 0.3396 5.40e-05 7s3w:A, 7s41:A, 7s42:A, 7s43:A, 7s44:A, 7s45:A
17 7txp:A 209 57 0.1127 0.1100 0.4035 1.31e-04 7txq:A, 7txs:A
18 2oi6:B 452 138 0.1814 0.0819 0.2681 6.21e-04 4aa7:A, 4aa7:B, 1fwy:A, 1fwy:B, 1hv9:A, 1hv9:B, 2oi5:A, 2oi5:B, 2oi6:A, 2oi7:A, 2oi7:B, 3twd:A, 3twd:B
19 3fsb:A 260 43 0.0882 0.0692 0.4186 0.001 3fs8:A, 3fs8:B, 3fsb:B, 3fsc:A, 3fsc:B
20 4e1k:A 450 135 0.1716 0.0778 0.2593 0.002 4knr:A, 4knx:A, 4kpx:A, 4kpz:A, 4kql:A, 2v0i:A, 2v0j:A, 2v0k:A, 2v0l:A, 2vd4:A, 2w0v:A, 2w0w:A
21 6wye:A 261 53 0.0931 0.0728 0.3585 0.002 7ra4:A, 7ra4:C, 7ra4:B, 6wye:C, 6wye:B, 6wye:D, 6wye:F, 6wye:E
22 4fce:A 441 38 0.0735 0.0340 0.3947 0.003
23 2fko:A 173 58 0.1127 0.1329 0.3966 0.004 1v3w:A, 1v67:A
24 8gpm:A 193 58 0.1127 0.1192 0.3966 0.004 8gpp:A, 8gpp:B, 8gpp:C
25 3mqg:C 192 52 0.0931 0.0990 0.3654 0.005 3mqg:A, 3mqg:B, 3mqg:D, 3mqg:E, 3mqg:F, 3mqh:A, 3mqh:C, 3mqh:B, 3mqh:D, 3mqh:F, 3mqh:E
26 1hm8:A 458 45 0.0784 0.0349 0.3556 0.009 4aaw:A, 4ac3:A, 1g97:A, 1hm8:B, 1hm9:A, 1hm9:B, 7kr9:A
27 3d8v:A 478 46 0.0931 0.0397 0.4130 0.009 3dj4:A, 4g3p:A, 4g3q:A, 4g3s:A, 4g87:A, 6ge9:A, 4hcq:A, 4k6r:A, 2qkx:A, 3spt:A, 3st8:A
28 4mzu:F 294 48 0.0833 0.0578 0.3542 0.009 4mzu:A, 4mzu:C, 4mzu:E, 4mzu:B, 4mzu:D, 4mzu:G, 4mzu:I, 4mzu:K, 4mzu:H, 4mzu:J, 4mzu:L, 4zu4:A, 4zu4:B, 4zu4:C
29 4mzu:F 294 28 0.0686 0.0476 0.5000 9.1 4mzu:A, 4mzu:C, 4mzu:E, 4mzu:B, 4mzu:D, 4mzu:G, 4mzu:I, 4mzu:K, 4mzu:H, 4mzu:J, 4mzu:L, 4zu4:A, 4zu4:B, 4zu4:C
30 4eaa:A 210 65 0.1127 0.1095 0.3538 0.011 4ea7:A, 4ea8:A, 4ea9:A, 4eab:A
31 3vnp:A 171 70 0.1078 0.1287 0.3143 0.017 3vnp:B, 3vnp:C
32 3foq:A 439 43 0.0882 0.0410 0.4186 0.018
33 2iu8:A 346 63 0.1127 0.0665 0.3651 0.020 2iu8:B, 2iu8:C, 2iu9:A, 2iu9:B, 2iu9:C, 2iua:A, 2iua:C
34 3vbm:E 193 56 0.0980 0.1036 0.3571 0.026 3vbi:A, 3vbi:E, 3vbi:C, 3vbj:A, 3vbj:C, 3vbj:E, 3vbk:A, 3vbk:E, 3vbk:C, 3vbl:A, 3vbl:C, 3vbl:E, 3vbm:A, 3vbm:C, 3vbn:A, 3vbn:E, 3vbn:C, 3vbp:A, 3vbp:E, 3vbp:C
35 3i3a:A 259 55 0.0833 0.0656 0.3091 0.034 3i3a:B, 3i3a:C, 3i3x:A, 3i3x:B, 3i3x:C
36 3r8y:A 203 111 0.1667 0.1675 0.3063 0.047 3r8y:C, 3r8y:D, 3r8y:F
37 1t3d:A 262 47 0.0833 0.0649 0.3617 0.061 7e3y:A, 7e3y:C, 7e3y:B, 8i04:A, 8i04:C, 8i04:B, 8i06:A, 8i06:B, 8i09:A, 8i09:B, 8i09:C, 8i09:D, 8i09:E, 8i09:F, 8i09:G, 8i09:H, 8i09:I, 8i09:J, 8i09:K, 8i09:L, 6jvu:A, 6jvu:C, 6jvu:B, 6jvu:D, 6jvu:F, 6jvu:E, 1t3d:B, 1t3d:C
38 2ggq:A 401 160 0.2157 0.1097 0.2750 0.064 5z09:A, 5z09:B, 5z09:C, 5z09:D
39 4m99:A 206 52 0.0882 0.0874 0.3462 0.098 4m99:B, 4m99:C
40 1ssq:D 257 47 0.0833 0.0661 0.3617 0.19 1ssq:A, 1sst:A, 1sst:B, 1sst:C
41 4j2l:B 123 43 0.0784 0.1301 0.3721 0.27 4j2j:A, 4j2j:B, 4j2j:C, 4j2l:A, 2m41:B
42 4h7o:A 258 47 0.0735 0.0581 0.3191 0.27 4h7o:C, 4h7o:B
43 3gvd:I 272 47 0.0784 0.0588 0.3404 0.28 3gvd:A, 3gvd:C, 3gvd:B, 3gvd:D, 3gvd:F, 3gvd:E, 3gvd:G, 3gvd:H, 3gvd:J, 3gvd:K, 3gvd:L
44 4r37:A 255 181 0.2108 0.1686 0.2376 0.55
45 7ok5:A 582 50 0.0833 0.0292 0.3400 0.58 7ok5:B
46 4ihh:E 340 34 0.0735 0.0441 0.4412 1.1 4ihf:D, 4ihf:E, 4ihf:F, 4ihf:A, 4ihf:B, 4ihf:C, 4ihg:E, 4ihg:C, 4ihg:B, 4ihg:D, 4ihh:A, 4ihh:C, 4ihh:B, 4ihh:D, 4ihh:F, 6p83:A, 6p83:C, 6p83:B, 6p84:A, 6p84:C, 6p84:B, 6p85:A, 6p85:C, 6p85:B, 6p86:A, 6p86:C, 6p86:B, 6p87:A, 6p87:C, 6p87:B, 6p88:A, 6p88:C, 6p88:B, 6p89:A, 6p89:C, 6p89:B, 6p8a:A, 6p8a:C, 6p8a:B, 6p8b:A, 6p8b:C, 6p8b:B
47 4ihh:E 340 149 0.1961 0.1176 0.2685 9.9 4ihf:D, 4ihf:E, 4ihf:F, 4ihf:A, 4ihf:B, 4ihf:C, 4ihg:E, 4ihg:C, 4ihg:B, 4ihg:D, 4ihh:A, 4ihh:C, 4ihh:B, 4ihh:D, 4ihh:F, 6p83:A, 6p83:C, 6p83:B, 6p84:A, 6p84:C, 6p84:B, 6p85:A, 6p85:C, 6p85:B, 6p86:A, 6p86:C, 6p86:B, 6p87:A, 6p87:C, 6p87:B, 6p88:A, 6p88:C, 6p88:B, 6p89:A, 6p89:C, 6p89:B, 6p8a:A, 6p8a:C, 6p8a:B, 6p8b:A, 6p8b:C, 6p8b:B
48 4eqy:G 260 53 0.0833 0.0654 0.3208 1.2
49 7l7y:AAA 217 118 0.1520 0.1429 0.2627 1.3 7l7z:AAA, 7l81:AAA, 7l82:AAA
50 4ozt:U 195 56 0.0784 0.0821 0.2857 2.8
51 7aqq:z 233 108 0.1275 0.1116 0.2407 3.0 7a23:q, 7a23:p, 7a24:q, 7a24:p, 7ar7:z, 7ar8:z, 7arb:z, 8bef:z, 8bpx:z, 8bq5:z, 8bq6:z
52 6jlz:I 430 40 0.0882 0.0419 0.4500 3.8
53 6j9e:C 1288 57 0.0931 0.0148 0.3333 3.8
54 6j9f:C 1296 57 0.0931 0.0147 0.3333 4.1
55 4hzd:A 250 51 0.0784 0.0640 0.3137 4.4 4hzc:F, 4hzc:J
56 3n9t:A 286 132 0.1225 0.0874 0.1894 4.6
57 2fq1:A 279 36 0.0539 0.0394 0.3056 5.0
58 4pfx:A 277 78 0.0931 0.0686 0.2436 5.2 4phr:A, 4phs:A
59 8ulg:B 824 28 0.0588 0.0146 0.4286 5.4 7jsn:B, 6mzb:B, 8ufi:B, 8ugb:B, 8ugs:B
60 4wer:A 285 79 0.0882 0.0632 0.2278 5.9
61 3dan:A 473 82 0.0931 0.0402 0.2317 6.8 3dam:A, 3dbm:A
62 7px0:B 1253 36 0.0735 0.0120 0.4167 7.4 7px0:A, 7px0:C, 7px0:D
63 4rkc:A 398 44 0.0686 0.0352 0.3182 7.7 4rkc:B, 4rkd:A, 4rkd:B, 4rkd:C, 4rkd:D, 4rkd:E, 4rkd:F, 4rkd:G, 4rkd:H, 6t3v:A, 6zup:B, 6zup:A, 6zur:B, 6zur:A, 6zvg:A, 6zvg:B, 6zvg:C, 6zvg:D
64 6erk:A 420 50 0.0735 0.0357 0.3000 8.5 6erk:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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