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BioLiP
>protein
MFSASFLPSILVPLTGLVFPAIAMALLLIYVEREDPSGI

The query sequence (length=39) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7qco:I 39 39 1.0000 1.0000 1.0000 3.32e-21 7qco:P, 7qco:p, 7qco:i
2 7a4p:I 35 33 0.5897 0.6571 0.6970 1.72e-11 6zzx:I, 6zzy:I
3 8htu:I 34 33 0.5641 0.6471 0.6667 4.02e-10 7ksq:I, 7kux:I, 6l35:I, 7xqp:I
4 7yca:I 35 33 0.5641 0.6286 0.6667 4.56e-10
5 6l4u:I 35 33 0.4872 0.5429 0.5758 5.87e-10
6 7dz7:I 42 32 0.5385 0.5000 0.6562 9.67e-10 7bgi:I, 7blx:I, 8cmo:I, 7d0j:I, 7dz8:I, 6ijj:I, 6ijo:I, 6jo5:I, 6jo6:I, 7r3k:I, 7zq9:I, 7zq9:I2, 7zqc:I, 7zqd:I, 7zqd:I2
7 7y5e:IN 31 31 0.5385 0.6774 0.6774 1.93e-09 7y5e:I2, 7y7a:I7, 7y7a:Io
8 6igz:I 32 31 0.5128 0.6250 0.6452 1.30e-08
9 8am5:i 40 33 0.4359 0.4250 0.5152 3.31e-08 8asl:i, 8asp:i, 6hqb:I, 4l6v:I, 4l6v:i, 4l6v:9, 6nwa:I, 6nwa:i, 6nwa:R, 5oy0:I, 5oy0:i, 5oy0:h, 7umh:I, 7umh:R, 7umh:i, 6uzv:I, 6uzv:i, 6uzv:h
10 8wm6:I 34 33 0.4359 0.5000 0.5152 4.01e-08 8wmj:I, 8wmv:I, 8wmw:I
11 7y7b:I 33 32 0.4615 0.5455 0.5625 5.68e-08 7y8a:I
12 6vpv:I 38 33 0.5128 0.5263 0.6061 6.59e-08 6vpv:i, 6vpv:7
13 6kif:I 38 33 0.4872 0.5000 0.5758 1.55e-07 6kif:S, 6kif:k, 6kig:I, 6kig:S, 6kig:k
14 8bcv:I 33 29 0.4872 0.5758 0.6552 1.80e-07 8bcw:I, 7ew6:I, 7ewk:I, 7f9o:I, 7f9o:l, 5zji:I
15 7wfd:AI 33 29 0.4615 0.5455 0.6207 1.92e-07 8j6z:I, 8j7a:I, 8j7b:I, 7wfe:BI, 7wg5:AI, 7wg5:BI
16 7dr0:I 30 29 0.4615 0.6000 0.6207 2.27e-07 7dr1:I, 7dr2:aI, 7dr2:bI, 7dr2:cI, 7dr2:dI
17 6ly5:i 33 28 0.4359 0.5152 0.6071 2.93e-06 7dkz:I, 5l8r:I, 3lw5:I, 2o01:I, 2wsc:I, 2wse:I, 2wsf:I, 4xk8:i, 6yac:I, 6yez:I, 6zoo:I, 6zxs:I
18 6k61:I 34 33 0.4359 0.5000 0.5152 3.59e-06 6jeo:aI, 6jeo:bI, 6jeo:cI, 6jeo:dI, 6k61:i, 6tcl:I1, 6tcl:I2, 6tcl:I, 6tcl:II, 7y3f:I
19 8jze:i 119 27 0.3846 0.1261 0.5556 1.02e-05 8jzf:i
20 8wey:I 32 31 0.4359 0.5312 0.5484 1.09e-05 7blz:I, 5zgb:I, 5zgh:I
21 8jjr:i 120 27 0.3846 0.1250 0.5556 5.33e-05
22 4fe1:I 38 33 0.3590 0.3684 0.4242 5.53e-05 7fix:I1, 7fix:I2, 7fix:I3, 1jb0:I, 6k33:aI, 6k33:bI, 6k33:cI, 6lu1:I, 7m75:I, 7m76:I, 7m78:I, 3pcq:I, 6pfy:I, 6pfy:R, 6pfy:e, 6pgk:I, 6pgk:R, 6pgk:e, 6tra:I, 6trc:I, 6trc:7, 6trc:i, 6trd:I, 6trd:7, 6trd:i, 5zf0:I1, 5zf0:I2, 5zf0:I3, 5zf0:I4, 5zf0:I5, 5zf0:I6
23 6sl5:I 39 29 0.3333 0.3333 0.4483 9.34e-05
24 6kmw:aI 38 33 0.3333 0.3421 0.3939 1.12e-04 6kmw:cI, 6kmw:bI
25 7lx0:R 42 33 0.2821 0.2619 0.3333 0.007 7lx0:I, 7lx0:i, 6pnj:I, 6pnj:R, 6pnj:i
26 6kmx:aI 41 33 0.2821 0.2683 0.3333 0.022 6kmx:cI, 6kmx:bI
27 7s3d:I 42 33 0.2564 0.2381 0.3030 0.034 7s3d:i, 7s3d:R
28 7coy:aI 30 30 0.3077 0.4000 0.4000 0.63 7coy:bI, 7coy:cI
29 2z7x:B 520 31 0.2564 0.0192 0.3226 6.3
30 8ags:AAA 298 33 0.2564 0.0336 0.3030 6.5 8agm:AAA, 8agm:BBB, 8agm:CCC, 8agm:DDD, 8agn:AAA, 8agn:BBB, 8agn:CCC, 8agn:DDD, 8agp:AAA, 8agp:BBB, 8ags:BBB, 5ng7:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218