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BioLiP
>protein
MFIKPGRCPKPAVQEDFDAARYLGVWYDIQRLPNKAQKGECATATYSLSPGVGFSVFNRERLANGTIKSVIGSAIAEDPC
EPAKLQFFHENAAPVPYWVLSTDYDNYALVYSCINLGASHAAYASIVSRQPTLPEETIKKLQGTMSSFGVGVDTLLTTNQ
DAAYCSAMN

The query sequence (length=169) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5ez2:A 169 169 0.9941 0.9941 0.9941 1.09e-126 5ez2:B, 5f6z:A, 5f6z:D, 5f6z:B, 5f6z:C, 7o2y:AAA, 7o3k:A, 7vnl:A, 7vnl:B, 7vns:A, 7vns:B, 7yx1:A, 7yx1:B
2 2hzq:A 166 157 0.3728 0.3795 0.4013 7.40e-38
3 1z24:A 189 158 0.2722 0.2434 0.2911 9.94e-13
4 1gka:A 180 169 0.2722 0.2556 0.2722 1.47e-11
5 8wb2:A 179 158 0.3018 0.2849 0.3228 1.71e-11
6 1gka:B 174 163 0.2485 0.2414 0.2577 1.98e-11
7 1iiu:A 174 148 0.2781 0.2701 0.3176 2.13e-09
8 2aco:A 168 166 0.2959 0.2976 0.3012 3.36e-09 2aco:B, 6ubo:A, 6ubo:B, 6ukl:E, 6ukl:D, 6ukl:F, 6vri:D, 6vri:E, 6vri:F
9 1qab:E 180 140 0.2544 0.2389 0.3071 3.09e-08 1qab:F
10 1fem:A 176 147 0.2249 0.2159 0.2585 8.46e-07 1aqb:A, 1brp:A, 3bsz:E, 3bsz:F, 1erb:A, 1fel:A, 1fen:A, 3fmz:A, 3fmz:B, 1hbp:A, 1kt3:A, 1kt4:A, 1kt5:A, 1kt6:A, 1kt7:A, 5nu7:A, 5nua:A, 5nub:A, 4o9s:A, 4o9s:B, 4psq:B, 4psq:A, 6qba:A, 1rbp:A, 1rlb:E, 1rlb:F, 2wr6:A
11 1bbp:A 173 139 0.2249 0.2197 0.2734 2.50e-06 1bbp:B, 1bbp:C, 1bbp:D
12 1n0s:A 173 141 0.2249 0.2197 0.2695 1.26e-04 1n0s:B
13 1lnm:A 160 137 0.2189 0.2313 0.2701 6.62e-04 1lke:A
14 4n7c:A 174 35 0.0888 0.0862 0.4286 0.054
15 1epb:B 164 18 0.0592 0.0610 0.5556 0.46 1epb:A
16 4imo:A 155 69 0.1302 0.1419 0.3188 0.57
17 8g8e:X 140 36 0.0828 0.1000 0.3889 1.5 8g87:X, 8g88:X, 8g8b:X, 8g8g:X, 8sps:M, 7u0g:K
18 8pno:A 202 82 0.1361 0.1139 0.2805 1.7 2b0c:A, 8pne:A, 8pno:B
19 3ve7:A 206 36 0.0769 0.0631 0.3611 2.0 3ve7:B
20 3l1p:A 147 42 0.0947 0.1088 0.3810 2.2 8bx2:A, 6ht5:E, 3l1p:B, 8sps:L, 8spu:L, 6t90:K, 7u0g:M, 7u0g:L, 7u0i:L, 7u0i:M
21 8bx1:A 127 42 0.0947 0.1260 0.3810 2.5
22 5c5e:A 284 20 0.0651 0.0387 0.5500 2.8 5c5e:B, 4g86:A, 4g86:B
23 5jpq:q 169 39 0.0710 0.0710 0.3077 4.0 4v7r:AD, 4v7r:CD
24 7ajt:DF 213 39 0.0710 0.0563 0.3077 4.3 7a1g:B, 7aju:DF, 7b7d:B, 8bn3:S5, 8bqd:B, 8bqx:B, 8c00:B, 8c01:B, 8cah:B, 8cas:C, 8cbj:F, 8ccs:i, 8cdl:i, 8cdr:i, 8ceh:i, 8cf5:i, 8cg8:i, 8cgn:i, 8civ:i, 8cku:i, 8cmj:i, 7d4i:SG, 7d5s:SG, 7d5t:SG, 7d63:SG, 5dat:S5, 5dat:s5, 5dc3:S5, 5dc3:s5, 5dge:S5, 5dge:s5, 5dgf:S5, 5dgf:s5, 5dgv:S5, 5dgv:s5, 6eml:B, 8eub:BF, 8evp:BF, 8evq:BF, 8evr:BF, 8evs:BF, 8evt:BF, 8ewb:BF, 8ewc:BF, 6fai:F, 5fci:S5, 5fci:s5, 5fcj:S5, 5fcj:s5, 6fyx:F, 6fyy:F, 6gq1:v, 6gqb:v, 6gqv:v, 6gsm:F, 6gsn:F, 6hhq:G, 6hhq:s5, 5i4l:S5, 5i4l:s5, 6i7o:B, 6i7o:Bb, 8i7j:F, 5it7:F, 5it9:F, 3j6x:S5, 3j6y:S5, 3j77:S5, 3j78:S5, 3j80:F, 3j81:F, 3jam:F, 3jap:F, 5juo:CB, 5jup:CB, 5jus:CB, 5jut:CB, 5juu:CB, 8k2d:SF, 8k82:SF, 6ke6:SG, 6lqp:SG, 6lqq:SG, 6lqr:SG, 6lqs:SG, 6lqt:SG, 6lqu:SG, 6lqv:SG, 5lyb:S5, 5lyb:s5, 5m1j:F2, 5mc6:B, 5mei:s5, 5mei:G, 7mpi:BF, 7mpj:BF, 7n8b:BF, 5ndg:S5, 5ndg:s5, 5ndv:S5, 5ndv:s5, 5ndw:S5, 5ndw:s5, 2noq:F, 7nrc:SB, 7nrd:SB, 5obm:S5, 5obm:s5, 5on6:s5, 5on6:G, 7osa:uS7, 7osm:uS7, 6q8y:B, 6rbd:F, 6rbe:F, 7rr5:SF, 8rw1:F, 6s47:BG, 8s8d:F, 8s8e:F, 8s8f:F, 8s8g:F, 8s8h:F, 8s8i:F, 8s8j:F, 6snt:F, 7suk:L5, 6sv4:B, 6sv4:Bb, 6sv4:Bc, 6t4q:SF, 6t7i:SF, 6t7t:SF, 6t83:Fb, 6t83:g, 5tbw:G, 5tbw:s5, 6tb3:B, 5tga:S5, 5tga:s5, 5tgm:S5, 5tgm:s5, 6tnu:B, 5tzs:6, 4u3m:S5, 4u3m:s5, 4u3n:S5, 4u3n:s5, 4u3u:S5, 4u3u:s5, 4u4n:S5, 4u4n:s5, 4u4o:S5, 4u4o:s5, 4u4q:S5, 4u4q:s5, 4u4r:S5, 4u4r:s5, 4u4u:S5, 4u4u:s5, 4u4y:S5, 4u4y:s5, 4u4z:S5, 4u4z:s5, 4u50:S5, 4u50:s5, 4u51:S5, 4u51:s5, 4u52:S5, 4u52:s5, 4u53:S5, 4u53:s5, 4u55:S5, 4u55:s5, 4u56:S5, 4u56:s5, 4u6f:S5, 4u6f:s5, 4uer:G, 6uz7:F, 4v4b:AG, 4v6i:AF, 4v7h:AG, 4v88:AF, 4v88:CF, 4v8y:AF, 4v8z:AF, 4v92:BF, 6wdr:F, 5wlc:L5, 6woo:FF, 5wyj:SG, 5wyk:SG, 6xiq:v, 6xir:v, 6y7c:F, 6z6j:SF, 6z6k:SF, 6zce:G, 7zpq:AF, 6zqa:DF, 6zqb:DF, 6zqc:DF, 6zqd:DF, 6zqe:DF, 6zqf:DF, 6zqg:DF, 7zrs:AF, 6zu9:C, 7zuw:AF, 7zux:DF, 6zvi:n, 7zw0:sB
25 7qxq:A 301 58 0.1006 0.0565 0.2931 4.9 6g75:B, 7ome:A, 7qxq:B, 7qxq:C, 7qxr:A, 7qxr:B, 7qxr:C
26 2ktd:A 167 140 0.1953 0.1976 0.2357 6.3
27 7wjl:A 453 24 0.0651 0.0243 0.4583 7.9
28 5ha0:A 156 15 0.0592 0.0641 0.6667 8.4 5h9l:A, 5h9n:A, 5hae:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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