BioLiP

>protein
MESKRNKPGKATGKGKPVGDKWLDDAGKDSGAPIPDRIADKLRDKEFKSFDDFRKAVWEEVSKDPELSKNLNPSNKSSVS
KGYSPFTPKNQQVGGRKVYELHADKPISQGGEVYDMDNIRVTTPKRHIDIHRGK

The query sequence (length=134) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	1fsj:B	134	134	0.9925	0.9925	0.9925	4.59e-95	1fr2:B, 1fsj:C, 1fsj:D, 1fsj:E, 2gyk:B, 2gyk:F, 2gze:B, 2gzf:B, 2gzg:B, 2gzi:B, 2gzj:B, 2gzj:F, 1v13:A, 1v13:B, 1v14:A, 1v14:B, 1v14:C, 1v14:D, 1v15:B, 1v15:D, 1v15:C
2	3u43:B	132	132	0.7985	0.8106	0.8106	3.14e-74
3	1v15:A	106	129	0.7910	1.0000	0.8217	1.71e-67
4	3fbd:A	132	132	0.6791	0.6894	0.6894	4.54e-61	7cei:B, 3fbd:D, 3gjn:B, 3gjn:C, 3gkl:A, 2ivh:A, 2jaz:B, 2jaz:D, 2jb0:B, 2jbg:B, 2jbg:D, 1m08:A, 1m08:B, 1mz8:B, 1mz8:D, 1pt3:A, 1pt3:B, 3zfk:A, 3zfk:B, 1zns:A, 1znv:B, 1znv:D
5	4qko:D	133	129	0.4776	0.4812	0.4961	5.65e-42	4qko:B, 4qko:F, 4qko:H
6	2wym:A	303	69	0.1567	0.0693	0.3043	1.8	2wym:B, 2wym:C, 2wym:D, 2wym:E, 2wym:F
7	7d5s:BE	865	60	0.1343	0.0208	0.3000	2.2	7ajt:UU, 6ke6:BE, 6lqp:BE, 6lqq:BE, 6lqu:BE, 7suk:LT, 5wlc:LT, 6zqa:UU, 6zqb:UU, 6zqc:UU
8	6jp4:A	770	97	0.2015	0.0351	0.2784	3.1	6jp4:B, 6jp4:C, 6jph:A, 6jpn:A
9	3j5s:D	554	95	0.2015	0.0487	0.2842	3.2
10	1wzc:B	244	68	0.1642	0.0902	0.3235	5.3	1wzc:A
11	6ujf:A	301	156	0.2836	0.1262	0.2436	6.3
12	5dst:C	317	42	0.1194	0.0505	0.3810	8.2	5dst:A, 5dst:B, 5dst:D, 5dst:E, 5dst:F, 5dst:G, 5dst:H, 5dst:I, 5dst:J, 5dst:K, 5dst:L, 5dst:M, 5dst:N, 5dst:O, 4x41:A
13	8yk3:A	620	28	0.0746	0.0161	0.3571	9.3	8yk3:B
14	2d5a:A	142	48	0.1194	0.1127	0.3333	9.4	2e6u:X

[Back]