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BioLiP
>protein
MEINIGIGEQDRAAIAEGLSRLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFEGQYTELAVAVDDIAERIRALGFPAPGT
YAAYARLSSIKEEEGVPEAEEMIRQLVQGQEAVVRTARSIFPLLDKVSDEPTADLLTQRMQVHEKTAWMLRSLLA

The query sequence (length=155) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8ffd:B 156 155 1.0000 0.9936 1.0000 2.14e-114 8ffb:A, 8ffb:B, 8ffb:L, 8ffb:C, 8ffb:D, 8ffb:E, 8ffb:F, 8ffb:G, 8ffb:I, 8ffb:H, 8ffb:J, 8ffb:K, 8ffc:A, 8ffc:E, 8ffc:B, 8ffc:L, 8ffc:C, 8ffc:J, 8ffc:D, 8ffc:F, 8ffc:G, 8ffc:I, 8ffc:H, 8ffc:K, 8ffc:M, 8ffc:N, 8ffc:O, 8ffc:P, 8ffd:A, 8ffd:C, 8ffd:D, 8ffd:E, 8ffd:F, 8ffd:G, 8ffd:H, 8ffd:I, 8ffd:J, 8ffd:K, 8ffd:L, 8ffd:M, 8ffd:N, 8ffd:O, 8ffd:P
2 1ji5:A 142 140 0.3613 0.3944 0.4000 1.60e-26 1ji5:B, 1ji5:C, 1ji5:D
3 1n1q:A 149 136 0.3548 0.3691 0.4044 3.45e-26 1n1q:B, 1n1q:C, 1n1q:D
4 1jig:A 146 143 0.3226 0.3425 0.3497 6.62e-24 1jig:B, 1jig:C, 1jig:D
5 2c2f:A 178 147 0.3097 0.2697 0.3265 1.24e-18 2c2u:A, 2f7n:A
6 1ji4:A 144 140 0.2774 0.2986 0.3071 1.75e-17 4evb:A, 4evc:A, 1ji4:D, 1ji4:B, 1ji4:C, 1ji4:E, 1ji4:H, 1ji4:F, 1ji4:G, 1ji4:I, 1ji4:L, 1ji4:J, 1ji4:K
7 2fjc:B 156 152 0.3355 0.3333 0.3421 4.19e-16 2fjc:A, 2fjc:D, 2fjc:C, 2fjc:E, 2fjc:H, 2fjc:F, 2fjc:G, 2fjc:I, 2fjc:L, 2fjc:J, 2fjc:K, 2fjc:M, 2fjc:N, 2fjc:O, 2fjc:P
8 5lbh:A 143 142 0.2903 0.3147 0.3169 1.69e-15 5lbh:J, 5lbh:B, 5lbh:C, 5lbh:D, 5lbh:G, 5lbh:E, 5lbh:F, 5lbh:L, 5lbh:H, 5lbh:I, 5lbh:K
9 3kwo:A 149 144 0.2645 0.2752 0.2847 2.10e-13 3kwo:B, 3kwo:C, 3kwo:D
10 2pyb:A 151 151 0.2645 0.2715 0.2715 4.48e-13 2pyb:B, 2pyb:C, 2pyb:D
11 2vxx:B 173 142 0.2710 0.2428 0.2958 8.58e-13 2vxx:A, 2vxx:D, 2vxx:C
12 5hjh:D 178 144 0.2516 0.2191 0.2708 4.10e-12 5hjh:A, 5hjh:B, 5hjh:C, 5i4j:A, 5i4j:B, 5i4j:C, 5i4j:D
13 4cyb:J 173 141 0.2452 0.2197 0.2695 5.84e-12 4cyb:A, 4cyb:B, 4cyb:C, 4cyb:D, 4cyb:E, 4cyb:F, 4cyb:G, 4cyb:H, 4cyb:I, 4cyb:K, 4cyb:L
14 4m33:A 161 136 0.2774 0.2671 0.3162 3.38e-11 4m32:A, 4m32:B, 4m32:C, 4m32:D, 4m33:B, 4m33:C, 4m33:D, 4m34:A, 4m34:B, 4m34:C, 4m34:D, 4m35:A, 4m35:B, 4m35:C, 4m35:D, 5ww3:A, 5ww3:B, 5ww3:C, 5ww3:D, 5ww4:A, 5ww4:B, 5ww4:C, 5ww4:D, 5ww5:A, 5ww5:C, 5ww5:B, 5ww6:A, 5ww6:B, 5ww6:C, 5ww6:D, 5ww7:A, 5ww7:C, 5ww7:B, 5ww7:D, 5ww8:A, 5ww8:B, 5ww8:C, 5ww8:D, 5ww9:A, 5ww9:B, 5ww9:C, 5ww9:D, 2z90:A, 2z90:B, 2z90:C, 2z90:D
15 2c2j:A 165 148 0.2774 0.2606 0.2905 3.54e-11 2c6r:A, 6tb5:A, 6tgt:A
16 6lkp:C 172 152 0.2581 0.2326 0.2632 5.82e-11 6lkp:A, 6lkp:B, 6lkp:D, 6lkp:E, 6lkp:F
17 6hx2:B 156 141 0.2452 0.2436 0.2695 1.80e-10 6hui:D, 6hui:A, 6hui:B, 6hui:C, 6hui:E, 6hui:F, 6hx2:A, 6hx2:C, 6hx2:D, 6hx2:E, 6hx2:F, 2iy4:B, 2iy4:C, 2iy4:D, 2iy4:E, 2iy4:G, 2iy4:F, 2iy4:H, 2iy4:I, 2iy4:J, 2iy4:K, 2iy4:L, 2iy4:M, 2iy4:O, 2iy4:N, 2iy4:P, 2iy4:Q, 2iy4:S, 2iy4:R, 2iy4:T, 2iy4:U, 2iy4:X, 2iy4:V, 2iy4:Y, 1qgh:E, 1qgh:G, 1qgh:A, 1qgh:C, 1qgh:I, 1qgh:K, 1qgh:F, 1qgh:H, 1qgh:J, 1qgh:L, 1qgh:B, 1qgh:D, 6sev:A, 6sev:B, 6sev:D, 6sev:E
18 4a25:B 169 138 0.2839 0.2604 0.3188 8.32e-10 4a25:A, 4a25:C, 4a25:D
19 7aqs:E 159 147 0.2581 0.2516 0.2721 2.11e-08 3ak9:A, 3ak9:C, 3ak9:B, 3ak9:D, 3ak9:E, 3ak9:G, 3ak9:F, 3ak9:H, 3ak9:I, 3ak9:K, 3ak9:J, 3ak9:L, 7aqs:A, 7aqs:C, 7aqs:B, 7aqs:D, 7aqs:G, 7aqs:F, 7aqs:H, 7aqs:I, 7aqs:K, 7aqs:J, 7aqs:L, 7aqs:M, 7aqs:O, 7aqs:N, 7aqs:P, 7aqs:Q, 7aqs:S, 7aqs:R, 7aqs:T, 7aqs:U, 7aqs:W, 7aqs:V, 7aqs:X, 1f30:A, 1f30:B, 1f30:E, 1f30:F, 1f30:G, 1f30:H, 1f30:I, 1f30:J
20 4dyu:H 157 147 0.2645 0.2611 0.2789 5.05e-08 4dyu:A, 4dyu:B, 4dyu:C, 4dyu:D, 4dyu:E, 4dyu:F, 4dyu:I, 4dyu:J, 4dyu:K, 4dyu:L
21 1vei:A 175 152 0.2710 0.2400 0.2763 6.52e-08 1uvh:A, 1uvh:B, 1uvh:C, 1uvh:D, 1veq:A, 1veq:J, 1veq:B, 1veq:C, 1veq:D, 1veq:E, 1veq:F, 1veq:L, 1veq:G, 1veq:H, 1veq:I, 1veq:K
22 3ge4:A 161 73 0.1935 0.1863 0.4110 9.35e-08 3ge4:B, 3ge4:C, 3ge4:D, 3ge4:E, 3ge4:F, 3ge4:G, 3ge4:H, 3ge4:I, 3ge4:J, 3ge4:K, 3ge4:L
23 2wlu:A 166 136 0.2258 0.2108 0.2574 1.35e-07
24 1moj:A 180 132 0.2452 0.2111 0.2879 1.92e-06 1moj:B, 1moj:C, 1moj:D, 1tjo:A, 1tjo:B, 1tjo:C, 1tjo:D, 1tk6:A, 1tk6:B, 1tk6:C, 1tk6:D, 1tko:A, 1tko:B, 1tko:C, 1tko:D, 1tkp:A, 1tkp:B, 1tkp:D, 1tkp:C
25 2yjj:G 157 127 0.2129 0.2102 0.2598 6.55e-06 2yjj:A, 2yjj:B, 2yjj:C, 2yjj:I, 2yjj:D, 2yjj:J, 2yjj:E, 2yjj:F, 2yjj:H, 2yjj:K, 2yjj:L, 2yjk:A, 2yjk:B, 2yjk:C, 2yjk:I, 2yjk:D, 2yjk:J, 2yjk:E, 2yjk:F, 2yjk:G, 2yjk:H, 2yjk:K, 2yjk:L
26 2bw1:G 165 139 0.2194 0.2061 0.2446 1.68e-04 2bw1:C, 2bw1:D, 2bw1:A, 2bw1:B, 2bw1:H, 2bw1:E, 2bw1:F, 2bw1:K, 2bw1:L, 2bw1:I, 2bw1:J, 1umn:K, 2ux1:A, 2ux1:B, 2ux1:C, 2ux1:D, 2ux1:E, 2ux1:F, 2ux1:G, 2ux1:H, 2ux1:I, 2ux1:J, 2ux1:K, 2ux1:L, 2v15:A, 2v15:B, 2v15:C, 2v15:D, 2v15:E, 2v15:F, 2v15:G, 2v15:H, 2v15:I, 2v15:J, 2v15:K, 2v15:L, 2xjm:A, 2xjm:B, 2xjm:C, 2xjm:D, 2xjm:E, 2xjm:F, 2xjm:G, 2xjm:H, 2xjm:I, 2xjm:J, 2xjm:K, 2xjm:L, 2xjn:A, 2xjn:C, 2xjn:D, 2xjn:E, 2xjn:F, 2xjn:G, 2xjn:H, 2xjn:I, 2xjn:J, 2xjn:K, 2xjn:L, 2xkq:A, 2xkq:B, 2xkq:C, 2xkq:D, 2xkq:E, 2xkq:F, 2xkq:G, 2xkq:H, 2xkq:I, 2xkq:J, 2xkq:K, 2xkq:L
27 6n38:H 532 65 0.1355 0.0395 0.3231 0.21 6n38:I
28 7s5k:I 68 63 0.1548 0.3529 0.3810 1.4 7s5c:A, 7s5c:B, 7s5c:E, 7s5c:F, 7s5c:G, 7s5c:H, 7s5c:I, 7s5c:J, 7s5c:C, 7s5c:D, 7s5k:A, 7s5k:B, 7s5k:F, 7s5k:E, 7s5k:G, 7s5k:H, 7s5k:J, 7s5k:C, 7s5k:D
29 5vsu:A 387 57 0.1032 0.0413 0.2807 2.7 6aso:A, 2kh9:A, 4n0t:A, 5tf6:A, 5tf6:C
30 1s9i:A 303 39 0.0968 0.0495 0.3846 2.8 1s9i:B
31 1d9v:A 309 64 0.1161 0.0583 0.2812 4.4 3kn7:A, 3kn8:A, 1mrp:A, 1nnf:A, 2o68:A, 3od7:A, 3odb:A
32 6jem:A 440 71 0.1226 0.0432 0.2676 4.7 6jem:B, 6jem:C, 6jen:A, 6jen:B, 6jen:C
33 8eo6:A 268 47 0.0968 0.0560 0.3191 4.9 8eo6:B
34 5egf:B 443 63 0.1290 0.0451 0.3175 7.1 5egf:A, 5egf:D, 5ejd:B, 5ejd:D, 5ejd:F, 5ejd:H, 5ejd:J, 5ejd:L, 5ejd:N, 5ejd:P
35 1uf2:A 967 80 0.1484 0.0238 0.2875 8.0
36 1a80:A 277 31 0.0903 0.0505 0.4516 8.4 1m9h:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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