BioLiP

>protein
MDVLERLDLDTVRDLSQRTDRLGVVSLYFNADPTQNLQVQAIDLRNRYRLLQRRMEADGSQRYRDVAAALERRRPLIETL
ITGVASGRGRIMFIGLDGDWTVHFECMMPVTNRVVLDDGPFIHPLVEVLDEGRPAGVVVISADDARLLEWRLGQLQEISR
IAQPFGQAPQERAGQMREQRQAREREGMQRFLTQVTATATELAEERGWERIVVSGGQRWTEPAKTRFGPPLRGKVLVDRG
LGGLDDAALTAAVSARLHRQHKYDEQQLLDYLCDAGGTGDVALGLSEVTAALNAGRVDHLVYDPAVRYVGTVGADGSLYA
DGEIAPHSHAATKDSRFTERLVDRALATGARISPVEGAADAVLKDAAGVAAVLRW

The query sequence (length=375) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	8v9l:z	375	375	1.0000	1.0000	1.0000	0.0	8v9j:z
2	7aor:bc	151	128	0.0800	0.1987	0.2344	0.13
3	6hiv:CZ	151	130	0.0853	0.2119	0.2462	1.1	6hiw:CZ, 6hiy:CZ
4	5grm:B	190	75	0.0533	0.1053	0.2667	3.9	5grm:A, 4jc5:A, 4jc5:B, 4kby:A, 4kby:B, 4loj:A, 4loj:B, 4lok:A, 4lok:B, 4lol:A, 4lol:B, 6xnn:A, 6xnn:B, 4yp1:A, 4yp1:B
5	3orc:A	65	66	0.0613	0.3538	0.3485	4.6	6cro:A
6	3ku1:A	214	94	0.0800	0.1402	0.3191	6.0	3ku1:C, 3ku1:G, 3ku1:H
7	6imv:A	494	32	0.0267	0.0202	0.3125	8.1	6imv:B, 6imw:A, 6imw:B
8	6msj:A	413	80	0.0533	0.0484	0.2500	8.2	8cvt:A, 5gjq:H, 5gjr:H, 5gjr:v, 5l4g:H, 5m32:c, 6msb:A, 6msd:A, 6mse:A, 6msg:A, 6msk:A, 7qxn:A, 7qxp:A, 7qxu:A, 7qxw:A, 7qxx:A, 7qy7:A, 7qya:A, 7qyb:A, 5t0c:AA, 5t0c:BA, 5t0g:A, 5t0h:A, 5t0i:A, 5t0j:A, 5vfp:A, 5vfq:A, 5vfr:A, 5vfs:A, 7w37:A, 7w38:A, 7w39:A, 7w3a:A, 7w3b:A, 7w3f:A, 7w3g:A, 7w3h:A, 7w3i:A, 7w3j:A, 7w3k:A, 6wjd:A, 6wjn:A
9	7spq:A	316	75	0.0613	0.0728	0.3067	9.3
10	6meo:G	398	26	0.0240	0.0226	0.3462	9.6	6met:G
11	8ed4:I	105	52	0.0400	0.1429	0.2885	9.8	8ed4:J, 8ed4:K, 8ed4:L

[Back]