BioLiP

>protein
MDKEHPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDINEKDISGPSPSKKLKKSQCT
PLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQEMIKGIKKCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMA
HAMNEYPDSCAVLVRRHGVYVWGETWEKAKTMCECYDYLFDIAVSMKKVGLDPSQLPVGEN

The query sequence (length=221) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	4m6r:A	224	221	1.0000	0.9866	1.0000	1.90e-169	4m6r:B, 4m6r:C, 4m6r:D
2	2fua:A	210	110	0.1357	0.1429	0.2727	2.36e-06	1dzu:P, 1dzv:P, 1dzw:P, 1dzx:P, 1dzy:P, 1dzz:P, 1e46:P, 1e47:P, 1e48:P, 1e49:P, 1e4a:P, 1e4b:P, 1e4c:P, 1fua:A, 3fua:A, 4fua:A, 7x78:A
3	6btg:A	207	212	0.2489	0.2657	0.2594	2.68e-05	6btd:A
4	4c25:A	212	206	0.2353	0.2453	0.2524	3.13e-04	4c24:A
5	6voq:A	207	202	0.2172	0.2319	0.2376	0.002
6	1jdi:A	223	180	0.2172	0.2152	0.2667	0.055	1jdi:B, 1jdi:C, 1jdi:D, 1jdi:E, 1jdi:F, 1k0w:A, 1k0w:B, 1k0w:C, 1k0w:D, 1k0w:E, 1k0w:F
7	6avz:B	347	95	0.0905	0.0576	0.2105	0.95
8	2w41:B	507	94	0.0950	0.0414	0.2234	1.2	2w40:A, 2w40:B, 2w40:C, 2w40:D, 2w41:A
9	1f37:B	110	66	0.0905	0.1818	0.3030	1.2	1f37:A, 1m2a:A, 1m2a:B, 1m2b:A, 1m2b:B, 1m2d:A, 1m2d:B
10	3kwc:A	205	75	0.0814	0.0878	0.2400	1.9	3kwc:B, 3kwc:C, 3kwc:D, 3kwc:E, 3kwc:F, 3kwd:A, 3kwe:A
11	5mul:A	378	42	0.0633	0.0370	0.3333	2.4
12	2yhe:A	639	80	0.0995	0.0344	0.2750	8.6	4av7:A, 4av7:B, 4av7:C, 4av7:D, 4av7:E, 4av7:F, 4axh:A, 4axh:B, 2yhe:B, 2yhe:C, 2yhe:D, 2yhe:E, 2yhe:F
13	2fz5:A	137	66	0.0814	0.1314	0.2727	8.6

[Back]