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BioLiP
>protein
MANSPVSVFGLGAMGTALATQFLRKGHKTTVWNRTPAKAQPLIAIGASHAPTIDSAAAASSLLIICQLDKASVMQTLQQA
PTAWAAKTIVDLTNGTPAHARETADWALAHGARYIHGGIMAVPFMIGQPDAMILYSGPAEVFEGVKDTLSVLGTNTYVGE
DVGLASLHDLALLSGMYGLFSGFTHAVALVQSANIPAAGFVATQLIPWLTAMTQHLNLLATQVDEKDYGDGGSSLDMQAK
AAPNILEASQAQGVSVELIQPIFKLIERRVEEGKGSEGLAALVGMIMK

The query sequence (length=288) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8p2j:C 293 287 0.9965 0.9795 1.0000 0.0 8ozv:A, 8ozw:A, 8ozw:B, 8p2j:A, 8p2j:B, 8p2j:D, 8p2j:E, 8p2j:F, 8p2j:G, 8p2j:H, 8p2j:I
2 5g6r:B 289 282 0.5243 0.5225 0.5355 6.33e-97 5g6r:A, 5g6s:A, 5g6s:G, 5g6s:B, 5g6s:C, 5g6s:D, 5g6s:F, 5g6s:E, 5g6s:H
3 6eoi:B 287 283 0.5451 0.5470 0.5548 3.43e-96 6eod:A, 6eod:H, 6eod:B, 6eod:G, 6eod:C, 6eod:D, 6eoh:A, 6eoh:B, 6eoi:A, 6h7p:A, 6h7p:B, 5ojl:A
4 8qhe:A 284 283 0.5000 0.5070 0.5088 4.16e-95 6sle:A, 6sle:C, 6sle:H, 6sle:D, 6sle:E, 6sle:F, 6sle:G
5 7wnn:B 290 286 0.4965 0.4931 0.5000 6.01e-81 7wnn:A, 7wnw:B, 7wnw:A
6 6sle:B 261 281 0.4688 0.5172 0.4804 2.51e-75
7 5a9t:A 286 283 0.4236 0.4266 0.4311 3.73e-65 5a9s:A, 5a9s:B, 5fwn:A, 5fwn:B
8 8hwy:A 287 289 0.4410 0.4425 0.4394 6.61e-64 8hwy:B, 8jku:A, 8jku:B
9 7osn:B 291 288 0.3958 0.3918 0.3958 8.27e-62 7osn:A, 7osn:C, 7osn:D, 7osn:E, 7osn:F
10 8j44:A 293 291 0.3924 0.3857 0.3883 6.50e-60 8j44:B, 8whg:B, 8whg:E, 8whg:F
11 8j43:A 285 281 0.3750 0.3789 0.3843 1.38e-57 8j43:B
12 8jyt:C 286 289 0.4097 0.4126 0.4083 8.86e-57 8jyt:A, 8jyt:B, 8jyt:D
13 5ocm:A 290 267 0.3715 0.3690 0.4007 7.27e-56 5ocm:F, 5ocm:B, 5ocm:C, 5ocm:D, 5ocm:E
14 3zhb:D 294 287 0.4028 0.3946 0.4042 2.13e-52 3zhb:A, 3zhb:B, 3zhb:C
15 7og3:A 290 275 0.3715 0.3690 0.3891 9.25e-52 7og3:B
16 8u05:B 290 285 0.3819 0.3793 0.3860 1.70e-49 8u05:A, 8u06:A, 8u06:B, 8u07:A, 8u07:B
17 4oqy:A 268 281 0.3333 0.3582 0.3416 9.59e-49
18 8bk1:A 288 288 0.3368 0.3368 0.3368 1.53e-48 8bj5:A, 8bj5:B, 8bj5:C, 8bj5:D, 8bk1:B, 8bk1:C, 8bk1:D
19 6jiz:C 295 293 0.3507 0.3424 0.3447 7.58e-45 6jit:B, 6jit:C, 6jiz:B
20 4d3f:B 289 282 0.3125 0.3114 0.3191 1.32e-43
21 8a3x:A 295 193 0.2882 0.2814 0.4301 2.96e-41 8a3x:B, 8a3x:C, 8a3x:D, 8a5z:A, 8a5z:B
22 6toe:B 293 288 0.3333 0.3276 0.3333 3.52e-39 6to4:A, 6to4:D, 6to4:B, 6to4:C, 6toe:A, 6toe:F, 6toe:C
23 7xr5:A 289 287 0.4201 0.4187 0.4216 1.54e-37 7xr5:B, 7xr5:C, 7xr5:D
24 6smt:B 289 283 0.3368 0.3356 0.3428 7.25e-34 6smt:A, 6smt:C, 6smt:D, 6smt:E
25 7y8m:B 288 289 0.3090 0.3090 0.3080 1.55e-32 7y8l:A, 7y8l:B, 7y8l:C, 7y8l:D, 7y8m:A, 7y8m:C, 7y8m:D, 7y8n:A, 7y8n:B, 7y8o:A, 7y8o:B
26 7a3w:B 293 254 0.2951 0.2901 0.3346 1.58e-31 7a3w:A
27 3pef:A 287 287 0.2257 0.2265 0.2265 1.42e-10 3pef:B, 3pef:C, 3pef:D, 3pef:E, 3pef:F, 3pef:G, 3pef:H
28 3pdu:A 287 67 0.0938 0.0941 0.4030 1.89e-08 3pdu:B, 3pdu:C, 3pdu:D, 3pdu:F, 3pdu:E, 3pdu:G, 3pdu:H
29 3w6z:A 296 294 0.2431 0.2365 0.2381 4.98e-08 3w6u:A, 3ws7:A, 5xvh:A
30 2uyy:A 292 169 0.1319 0.1301 0.2249 9.66e-08 2uyy:D
31 5u5g:A 286 166 0.1736 0.1748 0.3012 5.38e-05 5u5g:B, 5u5g:C, 5u5g:D
32 2cvz:C 289 155 0.1424 0.1419 0.2645 4.51e-04 2cvz:A, 2cvz:B, 1wp4:A, 1wp4:B, 1wp4:C, 1wp4:D
33 8i4q:A 479 176 0.1562 0.0939 0.2557 8.00e-04 8i4q:B
34 8c79:A 478 33 0.0556 0.0335 0.4848 0.079 8c79:B
35 6smz:C 295 59 0.0590 0.0576 0.2881 0.16 6smy:A, 6smy:B, 6smy:C, 6smy:D, 6smz:A, 6smz:B, 6smz:D
36 2w90:B 471 43 0.0521 0.0318 0.3488 0.46 2w8z:A, 2w8z:B, 2w90:A
37 7cb5:B 467 75 0.0694 0.0428 0.2667 0.61 7cb2:A, 7cb2:B, 7cb2:C, 7cb2:D, 7cb5:A, 7cb5:C, 7cb5:D
38 2iz1:B 471 43 0.0451 0.0276 0.3023 0.66 2iyo:A, 2iyp:A, 2iyp:B, 2iyp:C, 2iz0:A, 2iz0:B, 2iz0:C, 2iz1:A, 2iz1:C
39 3fwn:A 467 39 0.0417 0.0257 0.3077 0.98 3fwn:B, 2zya:A, 2zya:B, 2zyd:A, 2zyd:B
40 2ofp:B 294 41 0.0451 0.0442 0.3171 1.0 2ofp:A, 1yjq:A, 1yon:A
41 2i9p:B 296 169 0.1181 0.1149 0.2012 1.6 2i9p:A, 2i9p:C, 2i9p:D
42 5v6q:B 319 73 0.0729 0.0658 0.2877 1.7 5j23:A, 5j23:B, 5j23:C, 5j23:D, 5v6q:A, 5v6q:C, 5v6q:D, 5v7g:A, 5v7g:B, 5v7g:C, 5v7g:D, 5v7n:A, 5v7n:B, 5v7n:C, 5v7n:D
43 6joo:A 834 71 0.0833 0.0288 0.3380 1.7
44 3d1l:B 259 73 0.0660 0.0734 0.2603 2.0
45 5n2i:A 225 88 0.0833 0.1067 0.2727 2.1 5n2i:B, 5n2i:C, 5n2i:D
46 1txg:A 335 27 0.0382 0.0328 0.4074 2.3 1txg:B
47 4s28:A 520 34 0.0521 0.0288 0.4412 2.6 4n7q:A, 4s25:A, 4s26:A, 4s26:B, 4s27:A, 4s29:A
48 1n1e:A 349 26 0.0451 0.0372 0.5000 2.9 1evz:A, 1jdj:A, 1m66:A, 1m67:A, 1n1e:B, 1n1g:A
49 7kpt:A 412 31 0.0451 0.0316 0.4194 3.7 7kpq:A
50 6hcy:C 436 90 0.0729 0.0482 0.2333 3.9 6hcy:B, 6hcy:A, 6hd1:C, 6hd1:B, 6hd1:A
51 8t0z:A 409 101 0.0868 0.0611 0.2475 4.0 8t0z:B, 8t0z:C, 8t0z:D, 8t0z:E, 8t0z:G, 8t0z:I, 8t0z:K, 8t0z:F, 8t0z:H, 8t0z:J, 8t0z:L
52 6wpu:A 439 29 0.0417 0.0273 0.4138 4.0
53 6vpb:B 324 32 0.0382 0.0340 0.3438 4.2
54 2vq3:A 181 91 0.0729 0.1160 0.2308 5.1 2vq3:B
55 6fqy:A 468 35 0.0417 0.0256 0.3429 6.9 6fqy:B, 6fqz:A, 6fqz:B
56 7sqr:A 522 50 0.0590 0.0326 0.3400 7.5 7sqr:D, 7sqr:G, 7sqr:J, 7sqs:A
57 3pfo:A 426 119 0.1007 0.0681 0.2437 7.5 3pfo:B
58 2yjz:A 174 90 0.0729 0.1207 0.2333 7.8 2yjz:B, 2yjz:C, 2yjz:D
59 2hk9:A 269 37 0.0451 0.0483 0.3514 8.2 2hk9:B, 2hk9:C, 2hk9:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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