Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPC

The query sequence (length=70) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1g47:A 70 70 1.0000 1.0000 1.0000 1.16e-47 2kbx:B
2 3f6q:B 72 63 0.9000 0.8750 1.0000 3.43e-42 4hi8:B, 4hi9:B
3 3ixe:B 70 63 0.7429 0.7429 0.8254 3.44e-35
4 1x3h:A 80 40 0.2286 0.2000 0.4000 1.54e-07
5 2d8y:A 91 64 0.3000 0.2308 0.3281 9.68e-07
6 2mbv:A 96 57 0.2571 0.1875 0.3158 1.20e-06
7 7qb0:A 127 43 0.2571 0.1417 0.4186 2.11e-06
8 7qb0:A 127 64 0.3571 0.1969 0.3906 2.09e-05
9 2dfy:X 158 57 0.2571 0.1139 0.3158 3.21e-06 2dfy:C, 1rut:X
10 2lzu:A 72 65 0.2857 0.2778 0.3077 7.39e-06
11 1b8t:A 192 64 0.2714 0.0990 0.2969 4.34e-05 1ctl:A
12 7lt9:B 131 47 0.2571 0.1374 0.3830 4.57e-05 7d2s:B, 7d2t:B, 7d2t:D, 7d2u:B, 1nyp:A, 1u5s:B
13 1x4k:A 72 56 0.2143 0.2083 0.2679 1.59e-04
14 1cxx:A 59 51 0.2429 0.2881 0.3333 1.73e-04 1ibi:A, 1qli:A
15 1v6g:A 81 36 0.2143 0.1852 0.4167 1.96e-04
16 1iml:A 76 47 0.2286 0.2105 0.3404 1.97e-04
17 1x64:A 89 51 0.2429 0.1910 0.3333 5.80e-04
18 6cme:A 154 58 0.2714 0.1234 0.3276 7.36e-04 6cme:B, 3mmk:A, 3mmk:B
19 6u4m:A 65 46 0.2143 0.2308 0.3261 0.003 6u4n:B
20 1wyh:A 72 50 0.2143 0.2083 0.3000 0.004
21 4jcj:C 150 44 0.1857 0.0867 0.2955 0.006 4jcj:A, 4jcj:B
22 4jcj:C 150 39 0.1714 0.0800 0.3077 0.50 4jcj:A, 4jcj:B
23 2o13:A 58 51 0.2286 0.2759 0.3137 0.006
24 2rgt:B 154 58 0.2571 0.1169 0.3103 0.006 2rgt:A
25 1x61:A 72 32 0.2000 0.1944 0.4375 0.006
26 2jtn:A 182 59 0.2571 0.0989 0.3051 0.008
27 2dlo:A 81 64 0.2714 0.2346 0.2969 0.009
28 1x63:A 82 62 0.2429 0.2073 0.2742 0.021
29 2cu8:A 76 54 0.2286 0.2105 0.2963 0.056
30 2cup:A 101 57 0.1857 0.1287 0.2281 0.085
31 2d8z:A 70 71 0.2857 0.2857 0.2817 0.26
32 2egq:A 77 52 0.2000 0.1818 0.2692 0.27
33 1x62:A 79 70 0.2429 0.2152 0.2429 0.32
34 7aih:Ax 167 38 0.1429 0.0599 0.2632 0.41 7am2:Ax, 7ane:Ax
35 2lxd:A 123 45 0.1857 0.1057 0.2889 0.54 2l6y:B, 2l6z:C
36 1hfe:L 396 47 0.2143 0.0379 0.3191 0.59 8bj7:A, 8bj8:A, 1e08:A, 1gx7:A, 1hfe:M, 6sg2:AAA
37 2cur:A 69 49 0.2143 0.2174 0.3061 0.60
38 4fio:A 321 33 0.2143 0.0467 0.4545 0.65 4fio:B
39 2miu:A 98 56 0.2286 0.1633 0.2857 0.67
40 2o10:A 60 53 0.2286 0.2667 0.3019 0.96
41 1wig:A 73 27 0.1286 0.1233 0.3333 1.4
42 4kfz:B 148 58 0.2286 0.1081 0.2759 1.5 4kfz:A, 2xjy:A, 2xjz:A, 2xjz:B, 2xjz:C, 2xjz:D, 2xjz:E, 2ypa:C
43 3io3:A 230 33 0.1571 0.0478 0.3333 2.5
44 6yxy:BX 133 37 0.1429 0.0752 0.2703 2.5 7aoi:BX, 6hiv:BX, 6hix:BX
45 5vab:A 54 22 0.1143 0.1481 0.3636 3.4
46 4pxq:A 516 38 0.2143 0.0291 0.3947 3.6 4pxq:B
47 4kis:A 315 29 0.1429 0.0317 0.3448 5.3 6dnw:A, 4kis:B, 4kis:C
48 4kis:D 287 29 0.1429 0.0348 0.3448 5.9
49 6sjv:A 529 56 0.2429 0.0321 0.3036 6.2 6sqc:A
50 6qwi:A 448 17 0.1286 0.0201 0.5294 6.8 1bgg:B, 1bgg:C, 1bgg:D, 1e4i:A, 6qwi:B, 6r4k:A, 6r4k:B, 1uyq:A
51 6iso:I 248 32 0.1714 0.0484 0.3750 7.1
52 8bbk:A 274 32 0.1714 0.0438 0.3750 7.1 8bbk:B, 8bbk:C, 8bbk:D, 8bbk:E, 8bbk:F, 4bn4:A, 4bn5:A, 4bn5:B, 4bn5:C, 4bn5:D, 4bn5:E, 4bn5:F, 4bn5:G, 4bn5:H, 4bn5:I, 4bn5:J, 4bn5:K, 4bn5:L, 4bv3:A, 4bvb:A, 4bve:A, 4bvf:A, 4bvg:A, 4bvh:A, 4bvh:B, 4bvh:C, 5bwn:A, 5bwo:A, 4c78:A, 4c7b:A, 9cbt:A, 9cbt:B, 8ccw:A, 8ccz:A, 8ccz:B, 5d7n:A, 5d7n:B, 5d7n:C, 5d7n:D, 5d7n:E, 5d7n:F, 4fvt:A, 4fz3:A, 3glr:A, 3gls:A, 3gls:B, 3gls:C, 3gls:D, 3gls:E, 3gls:F, 3glt:A, 3glu:A, 5h4d:H, 5h4d:A, 4hd8:A, 8hlw:A, 8hly:A, 8hn9:A, 8hn9:B, 6iso:A, 6iso:B, 6iso:E, 6iso:G, 4jsr:A, 4jt8:A, 4jt9:A, 4o8z:A, 8v15:A, 8v15:C, 8v2n:A, 5y4h:A, 5ytk:A, 5ytk:D, 5ytk:E, 5ytk:F, 5ytk:B, 5ytk:C, 5z93:A, 5z94:A, 5z94:B, 5zgc:A, 5zgc:B, 5zgc:C, 5zgc:E, 5zgc:D
53 2cuq:A 80 59 0.2286 0.2000 0.2712 7.2
54 2xqn:T 125 55 0.2000 0.1120 0.2545 7.6 2iyb:E, 2iyb:F, 2iyb:G, 2iyb:H

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218