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BioLiP
>protein
MAEGKTIYEGGCNACHDAGMMGAPKPGDKAAWAPRIAKGEESVIKNTINGLNGMPPKGGNAALTDEQLTNAAKYLISISK

The query sequence (length=80) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 8hn3:A 80 80 1.0000 1.0000 1.0000 1.17e-54 8hn3:B
2 4j20:A 88 83 0.5625 0.5114 0.5422 1.63e-26 4j20:B
3 5b6q:A 76 73 0.3875 0.4079 0.4247 1.38e-17 5b6q:B, 6k7c:A, 6k7c:C
4 1kx2:A 81 75 0.3625 0.3580 0.3867 2.91e-16 1kx7:A
5 2zon:G 81 77 0.3625 0.3580 0.3766 5.48e-16
6 1cc5:A 83 62 0.3750 0.3614 0.4839 8.17e-13
7 1gks:A 78 79 0.3375 0.3462 0.3418 7.16e-08
8 1c6s:A 87 78 0.3250 0.2989 0.3333 8.66e-07 6tr1:A, 6tr1:C, 6tr1:E, 6tsy:A, 6tsy:B, 6tsy:C, 6tsy:D, 6tsy:E, 6tsy:F
9 3dmi:A 87 78 0.3375 0.3103 0.3462 9.86e-07
10 2zbo:A 86 80 0.2625 0.2442 0.2625 5.82e-04 2zbo:C, 2zbo:E, 2zbo:G, 2zbo:I, 2zbo:K
11 1gdv:A 85 82 0.2875 0.2706 0.2805 0.001
12 3ph2:B 85 78 0.2875 0.2706 0.2949 0.002 2v08:A, 2v08:B
13 1cyj:A 90 80 0.3125 0.2778 0.3125 0.003 1cyi:A
14 5djq:C 303 86 0.3250 0.0858 0.3023 0.003 5djq:M, 5djq:F, 5djq:I, 3mk7:C, 3mk7:M, 3mk7:F, 3mk7:I
15 7y5e:GN 84 81 0.2750 0.2619 0.2716 0.004 7y5e:G2, 7y7a:G7, 7y7a:Go
16 1kib:A 89 82 0.2875 0.2584 0.2805 0.013 1f1f:A, 1kib:B, 1kib:C, 1kib:D, 1kib:E, 1kib:F, 1kib:G, 1kib:H
17 1wve:C 75 79 0.2875 0.3067 0.2911 0.055 1dii:C, 1dii:D, 1diq:C, 1diq:D, 1wve:D
18 1gjq:A 541 74 0.3250 0.0481 0.3514 0.10 1bl9:A, 1bl9:B, 1gjq:B, 5guw:M, 5guw:N, 1hzu:A, 1hzv:A, 1n15:A, 1n15:B, 1n50:A, 1n50:B, 1n90:A, 1n90:B, 1nir:A, 1nir:B, 1nno:A, 1nno:B, 6tpo:A, 6tsi:A, 6tsi:B
19 2zoo:A 438 86 0.3375 0.0616 0.3140 0.14
20 6rtd:B 466 25 0.1375 0.0236 0.4400 0.17 6rtd:A, 6rte:A, 6rte:B
21 4ax3:D 457 86 0.2500 0.0438 0.2326 0.23 4ax3:A, 4ax3:B, 4ax3:C, 6f1q:A, 6fja:A, 5obo:A, 5ocb:A, 5ocf:A, 8qgf:A, 6qpt:A, 6qpt:B, 6qpt:C, 6qpt:D, 6qpt:E, 6qpt:F, 6qpu:A, 6qpu:B, 6qpu:C, 6qpu:D, 6qpu:E, 6qpu:F, 6qpv:A, 6qpv:I, 6qpx:A, 6qpx:I, 6qpz:A, 6qpz:I, 6qq0:A, 6qq1:A, 6qq2:A, 7qq2:A, 7r2u:A, 2yqb:A, 3zbm:A, 3ziy:A
22 6hwh:i 162 61 0.2375 0.1173 0.3115 0.37 6hwh:j
23 1c6o:A 89 79 0.2750 0.2472 0.2785 0.45 1c6o:B, 1c6r:A
24 6adq:C 223 61 0.2375 0.0852 0.3115 0.54 6adq:O, 6hwh:M, 6hwh:K, 8ovc:O, 8ovc:C, 8ovd:O, 8ovd:C, 7rh5:O, 7rh5:I, 7rh6:O, 7rh6:I, 7rh7:O, 7rh7:I
25 1a2s:A 89 79 0.2625 0.2360 0.2658 0.58 1ced:A, 1ctj:A
26 7w2j:C 418 89 0.2875 0.0550 0.2584 1.1 8jej:C, 8jek:C, 8k6j:C, 8k6k:C, 7w2j:F, 7wsq:C, 7wsq:F, 8xcm:C, 8xcn:C
27 4pwa:D 87 83 0.2750 0.2529 0.2651 1.4 4pw9:B, 4pwa:A, 4pwa:B, 4pwa:C
28 7e1w:O 223 27 0.1125 0.0404 0.3333 1.5 7e1v:O, 7e1v:C, 7e1w:C, 7e1x:O, 7e1x:C, 8hcr:C, 8hcr:O
29 1ls9:A 91 16 0.1000 0.0879 0.5000 1.6
30 6v59:A 419 28 0.1375 0.0263 0.3929 1.7 6nx0:A, 6v59:B
31 5aur:A 83 80 0.2750 0.2651 0.2750 2.1 2ai5:A, 5aur:C, 5aur:E, 5aur:G, 5aus:A, 5aus:C, 1ayg:A, 3vym:A, 1ynr:A, 1ynr:B, 1ynr:C, 1ynr:D, 4zid:A
32 5iz8:A 343 63 0.2625 0.0612 0.3333 3.8 5b6g:A, 7f6m:A, 7f7o:A, 8gsj:A, 5iz6:A, 5iz8:B, 5iz9:A, 5iza:A, 3nmx:A, 3nmx:B, 3nmx:C, 3qhe:A, 3qhe:C, 4yje:A, 4yjl:A, 4yjl:C, 4yjl:D, 4yjl:E, 4yjl:B, 4yjl:F, 4yk6:A, 5z8h:A
33 7qhm:C 233 27 0.1125 0.0386 0.3333 4.1 7q21:C, 7q21:c, 7qhm:P, 7qho:C, 7qho:P
34 3dr0:A 93 73 0.2875 0.2473 0.3151 6.7 3dr0:B, 3dr0:C, 4eic:A, 4eid:A
35 3hi7:A 715 27 0.1125 0.0126 0.3333 8.5 3hi7:B, 3hig:A, 3hig:B, 3hii:A, 3hii:B, 3k5t:A, 3mph:A, 3mph:B
36 6he6:A 117 28 0.1250 0.0855 0.3571 8.7 6hfx:A
37 6j28:A 345 29 0.1500 0.0348 0.4138 8.9 6j27:A, 6j27:B, 6j27:C, 6j27:D, 6j28:C, 6j28:B, 6j28:D
38 7vpp:A 904 21 0.1000 0.0088 0.3810 9.0 6buy:A, 6bv0:A, 6bv1:A, 6bv2:A, 6bv3:A, 6bv4:A, 4f5c:A, 4f5c:B, 4fke:A, 4fkh:A, 4fkk:A, 4hom:A, 5lds:D, 5lds:A, 5lds:B, 5lds:C, 5lg6:A, 5lg6:B, 4naq:A, 4nz8:A, 4ou3:A, 7vpp:C, 5z65:A
39 3oa8:B 180 83 0.2375 0.1056 0.2289 9.6 3oa8:D, 3oa8:F, 3ocd:B, 3ocd:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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