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BioLiP
>protein
LWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPQSDVMIVAGTLTNKMAPALRKVYDQMRYVVSMGSCANGGGYYHY
SYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRK

The query sequence (length=118) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8q0j:B 158 122 0.9915 0.7405 0.9590 2.56e-81 7ak5:B, 7ak6:B, 7b93:B, 8c2s:B, 8ca3:B, 8ca5:B, 7dgq:D, 7dgr:D, 7dgs:D, 7dgz:D, 7dh0:D, 7dkf:D2, 6g2j:B, 6g72:B, 5gpn:a, 5gup:I, 8iao:B, 8iap:B, 8ib4:B, 8ib5:B, 8ib9:B, 8iba:B, 8ibd:B, 8ibe:B, 8ic2:B, 8ic3:B, 5lc5:B, 5ldw:B, 5ldx:B, 5lnk:6, 5o31:B, 8olt:B, 8om1:B, 7psa:B, 8pw5:6, 8pw6:6, 8pw7:6, 8q0a:B, 8q0f:B, 8q0m:B, 8q0o:B, 8q0q:B, 8q1p:B, 8q1u:B, 8q1y:B, 8q25:B, 8q45:B, 8q46:B, 8q47:B, 8q48:B, 8q49:B, 8q4a:B, 6q9d:S7, 6qa9:S7, 6qbx:S7, 6qc2:S7, 6qc3:S7, 6qc4:S7, 6qc5:S7, 6qc6:S7, 6qc7:S7, 6qc8:S7, 6qc9:S7, 6qca:S7, 6qcf:S7, 7qsd:B, 7qsk:B, 7qsl:B, 7qsm:B, 7qsn:B, 7qso:B, 7r41:B, 7r42:B, 7r43:B, 7r44:B, 7r45:B, 7r46:B, 7r47:B, 7r48:B, 7r4c:B, 7r4d:B, 7r4f:B, 7r4g:B, 8rgp:6, 8rgq:6, 8rgr:6, 8rgt:6, 8ud1:1B, 8ueo:1B, 8uep:1B, 8ueq:1B, 8uer:1B, 8ues:1B, 8uet:1B, 8ueu:1B, 8uev:1B, 8uew:1B, 8uex:1B, 8uey:1B, 8uez:1B, 8ugh:1B, 8ugi:1B, 8ugj:1B, 8ugn:1B, 8ugn:5B, 8ugp:1B, 8ugr:1B, 8ugr:5B, 7v2c:C, 7v2d:C, 7v2e:C, 7v2f:C, 7v2h:C, 7v2k:C, 7v2r:C, 7v30:C, 7v31:C, 7v32:C, 7v33:C, 7v3m:C, 7vb7:C, 7vbn:C, 7vbz:C, 7vwj:C, 7vxp:C, 7vxu:C, 7vy8:C, 7vya:C, 7vyf:C, 7vyh:C, 7vyn:C, 7vz1:C, 7vzv:C, 7vzw:C, 7w00:C, 7w0h:C, 7w0r:C, 7w0y:C, 7w1o:C, 7w1p:C, 7w1t:C, 7w1u:C, 7w1v:C, 7w1z:C, 7w20:C, 7w2k:C, 7w2l:C, 7w2r:C, 7w2u:C, 7w2y:C, 7w31:C, 7w32:C, 7w35:C, 7w4c:C, 7w4d:C, 7w4e:C, 7w4f:C, 7w4g:C, 7w4j:C, 7w4k:C, 7w4l:C, 7w4m:C, 7w4n:C, 7w4q:C, 5xtb:C, 5xtd:C, 5xth:C, 5xti:C, 5xti:BC, 7zd6:6, 7zdh:6, 7zdj:6, 7zdm:6, 7zdp:6, 7zeb:6, 6zk9:6, 6zkc:6, 6zkd:6, 6zke:6, 6zkf:6, 6zkg:6, 6zkh:6, 6zki:6, 6zkj:6, 6zkk:6, 6zkl:6, 6zkm:6, 6zkn:6, 6zko:6, 6zkp:6, 6zkq:6, 6zkr:6, 6zks:6, 6zkt:6, 6zku:6, 6zkv:6, 6zr2:B, 6ztq:B
2 8b9z:B 182 122 0.8983 0.5824 0.8689 3.96e-77 8ba0:B, 8esw:S7, 8esz:S7
3 7zm7:K 182 122 0.8729 0.5659 0.8443 4.08e-75 6h8k:K, 7zmb:K, 7zmg:K
4 8e73:S7 158 122 0.8898 0.6646 0.8607 4.21e-75 7a23:E, 7a24:E, 7aqr:B, 7ar7:B, 7ar8:B, 7arb:B, 8bee:B, 8bpx:B, 8bq5:B, 8bq6:B, 6x89:S7
5 7o6y:K 177 122 0.8390 0.5593 0.8115 1.48e-73 6gcs:K, 7o71:K, 6rfq:K, 6rfr:K, 6rfs:K, 4wz7:K, 6y79:K, 6yj4:B
6 8qby:B 148 119 0.8729 0.6959 0.8655 5.35e-71
7 7tgh:S7 162 121 0.7627 0.5556 0.7438 1.49e-67 8b6f:AT, 8bqs:AT, 8gym:s7, 8gym:S7, 8gzu:s7, 8gzu:S7
8 7arc:B 154 110 0.7966 0.6104 0.8545 7.50e-67 7ard:B
9 8iuf:S7 201 122 0.8051 0.4726 0.7787 2.30e-66 8j9h:S7, 8j9i:S7, 8j9j:S7
10 7q5y:F 135 122 0.6441 0.5630 0.6230 1.93e-54 7q5y:L, 7q5y:R, 7q5y:X
11 6i0d:6 166 123 0.6102 0.4337 0.5854 5.19e-48 4hea:6, 4hea:G, 6i0d:G, 6i1p:6, 6i1p:G, 3i9v:6, 3i9v:F, 3ias:6, 3ias:F, 3ias:O, 3ias:X, 3m9s:6, 3m9s:F, 6q8o:6, 6q8o:G, 6q8w:6, 6q8w:G, 6q8x:6, 6q8x:G, 6y11:6, 6y11:G, 6ziy:6, 6zjl:6, 6zjn:6, 6zjy:6
12 8e9g:B 183 123 0.6017 0.3880 0.5772 3.21e-46 8e9h:B, 8e9i:B
13 6nbq:K 212 123 0.5254 0.2925 0.5041 6.75e-41 6hum:K, 6khi:K, 6khj:K, 6l7o:K, 6l7p:K, 6nbx:K, 6nby:K, 6tjv:K
14 2fug:6 144 121 0.5169 0.4236 0.5041 2.12e-39 2fug:F, 2fug:O, 2fug:X, 3iam:6, 3iam:F, 2ybb:6
15 7z7s:B 213 122 0.5339 0.2958 0.5164 3.49e-38 7nyr:B, 7nyu:B, 7nyv:B, 7p61:B, 7p62:B, 7p63:B, 7p64:B, 7p7c:B, 7p7j:B, 7p7k:B, 7p7l:B, 7p7m:B, 7z7r:B, 7z7t:B, 7z7v:B, 7z80:B, 7z83:B, 7z84:B
16 7awt:B 141 122 0.5169 0.4326 0.5000 4.82e-37
17 7p69:B 169 120 0.4831 0.3373 0.4750 6.59e-33 7nz1:B, 7p7e:B, 7zc5:B, 7zci:B
18 7wfg:K 167 123 0.4407 0.3114 0.4228 3.88e-31 7wg5:K
19 6cfw:J 143 112 0.3729 0.3077 0.3929 2.33e-25
20 7z0s:G 250 110 0.3814 0.1800 0.4091 1.43e-22 7z0t:G
21 6u8y:J 177 119 0.3559 0.2373 0.3529 6.76e-21 6u8y:j
22 6qgr:G 253 88 0.1949 0.0909 0.2614 2.08e-05 6qgt:G, 6qii:G
23 4omf:G 231 93 0.2119 0.1082 0.2688 4.35e-04 4ci0:B, 3zfs:B
24 7t2r:E 179 115 0.2712 0.1788 0.2783 0.001 7t2r:J, 7t30:E, 7t30:J
25 5xf9:C 178 122 0.2797 0.1854 0.2705 0.050 5xf9:G, 5xfa:C, 5xfa:G
26 8w7y:A 474 64 0.1525 0.0380 0.2812 0.15
27 3ayx:B 273 68 0.1610 0.0696 0.2794 0.67 3ayx:D, 3ayz:B, 3ayz:D, 5d51:S, 4iub:S, 4iuc:S, 4iud:S, 5mdj:S, 5mdk:S, 5mdl:S, 7odg:S, 7odh:S, 8pou:S, 8pov:S, 8pow:S, 8pox:S, 8poz:S, 3rgw:S, 4ttt:S, 5y34:B, 5y34:D
28 5odc:E 298 26 0.0847 0.0336 0.3846 2.0 5odc:K, 5odh:E, 5odh:K, 5odi:E, 5odi:K, 5odq:E, 5odq:K, 5odr:E, 5odr:K
29 6w2j:B 1364 46 0.1186 0.0103 0.3043 3.6
30 3ie7:A 309 58 0.1356 0.0518 0.2759 4.0 3jul:A
31 5lnk:L 599 54 0.1102 0.0217 0.2407 4.5
32 1aor:A 605 73 0.2034 0.0397 0.3288 6.3 1aor:B
33 2xcu:A 353 25 0.0847 0.0283 0.4000 9.4 2xcu:B, 2xcu:C, 2xcu:D
34 1xqp:A 252 21 0.0763 0.0357 0.4286 9.5

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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