BioLiP

>protein
LTVKSTKQWTIGTDVQGSERLNGVSYQEDALITYGDYQYVTFYETAPAGYLNHFVKVGRRRVSPSVGDWEFLTLDDYTQK
TMDGHNMISMGISGDGKIHLSFDHHDVPINYRISKNGIAKDVPSKWTSDLFDPVVHELVGSQGPYSPLTYPRFEPLGNGD
LLLEFRIGQSGSGDSYIHRYSASTGKWQAYGMYIQGDDNNAYINGLDYLDGKLYTSWTVRETPNADTNHGVYFAYSNDDG
KTWFNTNDTKLTKPISTSDDSTLIWDIPQNSRMVNQEGQLIDTKGRFHILMRDLLSGEHQYQHYLRKADGTWTKNAINPA
GLNGPDLYDPRGKLAGDASGEYLFGILPDPVKQSTGIYVATASKDFKDWKSLAEIPNTSTEPLFDKTRLHESGILSVFVR
QAGGFPDRKLQVWDFELDL

The query sequence (length=419) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	7esn:A	435	419	0.9976	0.9609	0.9976	0.0	7esk:A, 7esm:A, 8i4d:A, 7yqs:A
2	5mul:A	378	267	0.2076	0.2302	0.3258	4.87e-30
3	6jq9:B	483	229	0.1599	0.1387	0.2926	7.29e-10	6byp:A, 6byp:B, 6byt:A, 6byt:B, 6byx:A, 6byx:B, 6jq9:A
4	7czh:A	481	293	0.1838	0.1601	0.2628	2.42e-09	7czh:B, 7drq:A, 7drq:B
5	5d1o:A	375	80	0.0453	0.0507	0.2375	2.6	5d1o:B, 5d1p:A, 5d1p:B
6	5hc2:A	343	68	0.0334	0.0408	0.2059	4.0	5hc0:A, 5hc2:B, 5hc2:C, 5hc2:D, 5hc3:B, 5hc3:D, 5hc4:A
7	4mc7:A	363	113	0.0668	0.0771	0.2478	5.4	4k3y:A, 4k3y:B, 4k3y:C, 4k3y:D, 4mc7:B, 4mc7:C, 4mc7:D
8	8oh5:C	1172	54	0.0406	0.0145	0.3148	6.5	8oh5:F, 8oh5:I, 8oh5:L, 8oh9:C, 8oh9:F, 8oh9:I, 8oh9:L

[Back]