BioLiP

>protein
LSSAYVDSHKWEAREKEHYCLADLASLMDKTFERKLPVSSLTISRLIDNISSREEIDHAEYYLYKFRHSPNCWYLRNWTI
HTWIRQCLKYDAQDKALYTLVNKVQYGIFPDNFTFNLLMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQLLSLYVLFHC
LAKKTDFSWEEERNFGASLLLPGLKQKNSVGFSSQLYGYALLGKVELQQGLRAVYHNMPLIWKPGYLDRALQVMEKVAAS
PEDIKLCREALDVLGAVLKALTSADGASEEQSQNDEDNQGSEKLVEQLDIEETEQSKLPQYLERFKALHSKLQALGKIES
EGLLSLTTQLVKEKLSTCEAEDIATYEQNLQQWHLDLVQLIQREQQQREQAKQEYQAQKAAKASA

The query sequence (length=385) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	8k2a:Sc	385	385	1.0000	1.0000	1.0000	0.0	8any:AV, 8csq:V, 8csr:V, 8css:V, 8cst:V, 8csu:V, 7l08:AV, 8oir:AV, 8ois:AV, 7p2e:V, 7pnx:V, 7pny:V, 7pnz:V, 7po0:V, 7po1:V, 7po2:V, 7po3:V, 7qi4:AV, 7qi5:AV, 7qi6:AV, 8qrk:V, 8qrl:V, 8qrm:V, 8qrn:V, 6rw4:V, 6rw5:V, 6vlz:AV, 6vmi:AV, 8xt0:Sc, 8xt2:Sc, 6zm5:AV, 6zm6:AV
2	7og4:AV	349	370	0.9065	1.0000	0.9432	0.0	7a5f:V6, 7a5g:V6, 7a5i:V6, 7a5k:V6, 3j9m:AV, 6nu2:AV, 6nu3:AV, 6zs9:AV, 6zsa:AV, 6zsb:AV, 6zsc:AV, 6zsd:AV, 6zse:AV, 6zsg:AV
3	6gaw:Ae	388	386	0.8312	0.8247	0.8290	0.0	6gaz:Ae, 7nqh:Ae, 7nql:Ae, 7nsi:Ae, 7nsj:Ae, 8oin:AV, 8oip:AV, 6ydp:Ae, 6ydw:Ae
4	6neq:e	358	376	0.7922	0.8520	0.8112	0.0	3jd5:e, 6nf8:e
5	7pnt:V	365	377	0.7584	0.8000	0.7745	0.0	7pnu:V, 7pnv:V, 7pnw:V
6	5i9f:A	388	228	0.1377	0.1366	0.2325	0.001	5i9g:C
7	5i9f:A	388	152	0.1039	0.1031	0.2632	0.001	5i9g:C
8	5i9f:A	388	173	0.1143	0.1134	0.2543	0.004	5i9g:C
9	5i9f:A	388	143	0.0935	0.0928	0.2517	0.018	5i9g:C
10	5i9f:A	388	145	0.0883	0.0876	0.2345	4.1	5i9g:C
11	5i9h:A	368	118	0.0831	0.0870	0.2712	0.005	5i9d:A
12	5i9h:A	368	172	0.1143	0.1196	0.2558	0.010	5i9d:A
13	5i9h:A	368	223	0.1325	0.1386	0.2287	0.025	5i9d:A
14	5i9h:A	368	173	0.1169	0.1223	0.2601	0.036	5i9d:A
15	8y0w:CB	768	118	0.0831	0.0417	0.2712	0.22	8y0x:CB
16	4pa0:A	974	118	0.0779	0.0308	0.2542	0.96	4db1:A, 4db1:B, 8efe:A, 8efh:A, 9f6c:A, 6fsa:A, 6fsa:B, 5n69:A, 5n69:B, 5n6a:A, 8qyu:A
17	6xyw:BG	364	68	0.0545	0.0577	0.3088	1.2
18	8act:A	873	118	0.0779	0.0344	0.2542	1.2	8act:B, 9f6c:B, 8qyp:A, 8qyq:A, 8qyq:B, 8qyr:B
19	4m59:A	687	62	0.0494	0.0277	0.3065	1.4	4m59:B, 4oe1:A, 4oe1:B
20	8q87:A	857	131	0.0909	0.0408	0.2672	3.9	6d9j:9, 6gz3:Ct, 6gz4:Ct, 6gz5:Ct, 3j7p:4, 7ls1:m, 7ls2:m, 6mtd:v, 6mte:v, 7oyc:v2, 4v6x:Az, 8xsx:CB, 6z6m:CB, 6z6n:CB
21	7vi8:B	253	85	0.0545	0.0830	0.2471	7.0	7vi8:A
22	7rwk:A	368	62	0.0364	0.0380	0.2258	7.9	7rwk:B

[Back]