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BioLiP
>protein
LSEEEIQRIFGLSSEQIKSLPEEKYKKKVEKTGYL

The query sequence (length=35) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7arr:A 35 35 1.0000 1.0000 1.0000 5.87e-18 7arr:B, 7ars:A
2 4e37:B 480 29 0.2286 0.0167 0.2759 0.63 4e37:A, 4e37:C, 4e37:D
3 5a9z:BH 208 26 0.3143 0.0529 0.4231 0.78 5aa0:BH, 4aqy:D, 7azo:S4A, 7azo:S4B, 7azs:S4A, 7azs:S4B, 9b00:1d, 9b00:2d, 4b3m:D, 4b3r:D, 4b3s:D, 4b3t:D, 6b4v:MA, 6b4v:QC, 6boh:NA, 6boh:SC, 6bok:LA, 6bok:OC, 5br8:D, 6buw:QD, 6buw:XD, 6bz6:QD, 6bz6:XD, 6bz7:QD, 6bz7:XD, 6bz8:QD, 6bz8:XD, 6c5l:AD, 6c5l:CD, 6cae:1d, 6cae:2d, 6cao:D, 6cap:D, 6caq:D, 6car:D, 6cas:D, 6cfj:1d, 6cfj:2d, 6cfk:1d, 6cfk:2d, 6cfl:1d, 6cfl:2d, 8cvj:1d, 8cvj:2d, 8cvk:1d, 8cvk:2d, 8cvl:1d, 8cvl:2d, 5czp:XD, 5czp:QD, 6czr:1d, 6czr:2d, 5d8b:EA, 5d8b:AC, 5dfe:XD, 5dfe:QD, 5dox:1d, 5dox:2d, 5doy:1d, 5doy:2d, 4dr1:D, 4dr2:D, 4dr3:D, 4dr4:D, 4dr5:D, 4dr6:D, 4dr7:D, 6dti:D, 4duy:D, 4duz:D, 7dug:D, 7duh:D, 7dui:D, 7duj:D, 7duk:D, 7dul:D, 4dv0:D, 4dv1:D, 4dv2:D, 4dv3:D, 4dv4:D, 4dv5:D, 4dv6:D, 4dv7:D, 2e5l:D, 5e7k:3E, 5e7k:32, 5e81:3E, 5e81:32, 8ekb:1d, 8ekb:2d, 5el4:3E, 5el4:32, 5el5:3E, 5el5:32, 5el6:3E, 5el6:32, 5el7:3E, 5el7:32, 8ev6:1d, 8ev6:2d, 8ev7:1d, 8ev7:2d, 2f4v:D, 5f8k:1d, 5f8k:2d, 8fc1:1d, 8fc1:2d, 8fc2:1d, 8fc2:2d, 8fc3:1d, 8fc3:2d, 8fc4:1d, 8fc4:2d, 8fc5:1d, 8fc5:2d, 8fc6:1d, 8fc6:2d, 5fdu:1d, 5fdu:2d, 5fdv:1d, 5fdv:2d, 1fjg:D, 1fka:D, 6fkr:1d, 6fkr:2d, 8fom:QD, 8fom:XD, 8fon:QD, 8fon:XD, 8g29:1d, 8g29:2d, 8g2a:1d, 8g2a:2d, 8g2b:1d, 8g2b:2d, 8g2c:1d, 8g2c:2d, 8g2d:1d, 8g2d:2d, 4gkj:D, 4gkk:D, 6gsj:3E, 6gsj:32, 6gsk:3E, 6gsk:32, 6gsl:3E, 6gsl:32, 6gzq:D2, 6gzx:D3, 6gzx:D4, 6gzz:D3, 6gzz:D4, 5hau:1d, 5hau:2d, 5hcp:1d, 5hcp:2d, 5hcq:1d, 5hcq:2d, 5hcr:1d, 5hcr:2d, 5hd1:1d, 5hd1:2d, 2hhh:D, 1hnw:D, 1hnx:D, 1hnz:D, 1hr0:D, 1i94:D, 1i95:D, 1i96:D, 1i97:D, 1ibk:D, 1ibl:D, 1ibm:D, 5ib7:3E, 5ib7:32, 5ib8:3E, 5ib8:32, 5ibb:3E, 5ibb:32, 5imq:H, 5imr:H, 5iwa:D, 5j30:QD, 5j30:XD, 5j3c:QD, 5j3c:XD, 5j4b:1d, 5j4b:2d, 5j4c:1d, 5j4c:2d, 5j4d:MA, 5j4d:RC, 1j5e:D, 5j8b:d, 4ji0:D, 4ji1:D, 4ji2:D, 4ji3:D, 4ji4:D, 4ji5:D, 4ji6:D, 4ji7:D, 4ji8:D, 7jql:1d, 7jql:2d, 7jqm:1d, 7jqm:2d, 4jv5:D, 4jya:D, 4k0k:D, 4khp:D, 4kvb:D, 4l47:QD, 4l47:XD, 4l71:QD, 4l71:XD, 4lel:QD, 4lel:XD, 4lf4:D, 4lf5:D, 4lf6:D, 4lf7:D, 4lf8:D, 4lf9:D, 4lfa:D, 4lfb:D, 4lfc:D, 4lfz:QD, 4lfz:XD, 7lh5:AD, 7lh5:CD, 5lmn:D, 5lmo:D, 5lmp:D, 5lmq:D, 5lmr:D, 5lms:D, 5lmt:D, 5lmu:D, 5lmv:D, 4lnt:QD, 4lnt:XD, 4lsk:QD, 4lsk:XD, 4lt8:QD, 4lt8:XD, 7md7:1d, 7md7:2d, 6mkn:D, 6mpf:D, 6mpi:D, 6n1d:AS04, 6n1d:BS04, 1n32:D, 1n33:D, 1n34:D, 1n36:D, 6n9e:1d, 6n9e:2d, 6n9f:1d, 6n9f:2d, 5ndj:3E, 5ndj:32, 5ndk:3E, 5ndk:32, 6nd5:1d, 6nd5:2d, 6nd6:1d, 6nd6:2d, 6ndk:QD, 6ndk:XD, 6nsh:QD, 6nsh:XD, 6nta:QD, 6nta:XD, 6nuo:QD, 6nuo:XD, 6nwy:QD, 6nwy:XD, 4nxm:D, 4nxn:D, 6ny6:D, 6o3m:QD, 6o3m:XD, 6o97:1d, 6o97:2d, 6of1:1d, 6of1:2d, 6of6:QD, 6of6:XD, 6oj2:QD, 6oj2:XD, 6ope:QD, 6ope:XD, 6ord:QD, 6ord:XD, 6osi:QD, 6osi:XD, 3oto:D, 5ot7:C, 6otr:QD, 6otr:XD, 4ox9:D, 6oxa:QD, 6oxa:XD, 6oxi:QD, 6oxi:XD, 4p6f:QD, 4p6f:XD, 4p70:QD, 4p70:XD, 6q95:i, 6qnq:3E, 6qnq:32, 6qnr:3E, 6qnr:32, 7rq8:1d, 7rq8:2d, 7rq9:1d, 7rq9:2d, 7rqa:1d, 7rqa:2d, 7rqb:1d, 7rqb:2d, 7rqc:1d, 7rqc:2d, 7rqd:1d, 7rqd:2d, 7rqe:1d, 7rqe:2d, 3t1h:D, 3t1y:D, 8t8b:1d, 8t8b:2d, 8t8c:1d, 8t8c:2d, 4tua:QD, 4tua:XD, 4tub:QD, 4tub:XD, 4tuc:QD, 4tuc:XD, 4tud:QD, 4tud:XD, 4tue:QD, 4tue:XD, 7u2h:1d, 7u2h:2d, 7u2i:1d, 7u2i:2d, 7u2j:1d, 7u2j:2d, 6ucq:1d, 6ucq:2d, 8ud6:1d, 8ud6:2d, 8ud7:1d, 8ud7:2d, 8ud8:1d, 8ud8:2d, 6uo1:1d, 6uo1:2d, 5uq7:d, 5uq8:d, 2uu9:D, 2uua:D, 2uub:D, 2uuc:D, 8uvr:1d, 8uvr:2d, 8uvs:1d, 8uvs:2d, 2uxb:D, 2uxc:D, 2uxd:D, 7v2l:D, 7v2m:D, 7v2n:D, 7v2o:D, 7v2p:D, 7v2q:D, 4v49:AD, 4v4a:AD, 4v4g:AD, 4v4g:CD, 4v4g:ED, 4v4g:GD, 4v4g:ID, 4v4i:e, 4v4j:e, 4v4p:BG, 4v4r:AD, 4v4s:AD, 4v4t:AD, 4v4x:AG, 4v4y:AG, 4v4z:AG, 4v51:AD, 4v51:CD, 4v5a:AD, 4v5a:CD, 4v5c:AD, 4v5c:CD, 4v5d:AD, 4v5d:CD, 4v5e:AD, 4v5e:CD, 4v5f:AD, 4v5f:CD, 4v5g:AD, 4v5g:CD, 4v5j:AD, 4v5j:CD, 4v5k:AD, 4v5k:CD, 4v5l:AD, 4v5m:AD, 4v5n:AD, 4v5p:AD, 4v5p:CD, 4v5q:AD, 4v5q:CD, 4v5r:AD, 4v5r:CD, 4v5s:AD, 4v5s:CD, 4v63:AD, 4v63:CD, 4v67:AD, 4v67:CD, 4v68:AD, 4v6a:AD, 4v6a:CD, 4v6f:BG, 4v6f:CG, 4v6g:AG, 4v6g:CG, 4v7j:Ad, 4v7j:Bd, 4v7k:Ad, 4v7k:Bd, 4v7l:AD, 4v7l:CD, 4v7m:AD, 4v7m:CD, 4v7p:AD, 4v7p:DD, 4v7w:AD, 4v7w:CD, 4v7x:AD, 4v7x:CD, 4v7y:AD, 4v7y:CD, 4v7z:AD, 4v7z:CD, 4v83:AD, 4v83:CD, 4v84:AD, 4v84:CD, 4v87:BG, 4v87:CG, 4v8a:CD, 4v8a:DD, 4v8b:AG, 4v8b:CG, 4v8c:CG, 4v8c:DG, 4v8d:AG, 4v8d:CG, 4v8e:BG, 4v8e:DG, 4v8f:BG, 4v8f:CG, 4v8g:AD, 4v8g:CD, 4v8h:AD, 4v8h:CD, 4v8i:AD, 4v8i:CD, 4v8j:AD, 4v8j:CD, 4v8n:AD, 4v8n:CD, 4v8o:AD, 4v8q:BD, 4v8u:AD, 4v8u:CD, 4v8x:AD, 4v8x:CD, 5v8i:1d, 5v8i:2d, 4v90:AD, 4v95:AD, 4v95:CD, 4v97:AD, 4v97:CD, 4v9a:AG, 4v9a:CG, 4v9b:AG, 4v9b:CG, 4v9h:AD, 4v9i:AD, 4v9i:CD, 4v9j:AD, 4v9j:CD, 4v9k:AD, 4v9k:CD, 4v9l:AD, 4v9l:CD, 4v9m:AD, 4v9m:CD, 4v9n:AD, 4v9n:CD, 4v9q:BD, 4v9q:DD, 4v9r:AD, 4v9r:CD, 4v9s:AD, 4v9s:CD, 5vp2:1d, 5vp2:2d, 5vpo:QD, 5vpo:XD, 5vpp:QD, 5vpp:XD, 2vqe:D, 2vqf:D, 8vtu:1d, 8vtu:2d, 8vtv:1d, 8vtv:2d, 8vtw:1d, 8vtw:2d, 8vtx:1d, 8vtx:2d, 8vty:1d, 8vty:2d, 1vvj:QD, 1vvj:XD, 1vy4:AD, 1vy4:CD, 1vy5:AD, 1vy5:CD, 1vy6:AD, 1vy6:CD, 1vy7:AD, 1vy7:CD, 4w29:AD, 4w29:CD, 4w2e:d, 4w2f:AD, 4w2f:CD, 4w2g:AD, 4w2g:CD, 4w2h:AD, 4w2h:CD, 4w2i:AD, 4w2i:CD, 4w4g:QD, 4w4g:XD, 5w4k:1d, 5w4k:2d, 5wis:1d, 5wis:2d, 5wit:1d, 5wit:2d, 5wnp:D, 5wnq:D, 5wnr:D, 5wns:D, 5wnt:D, 5wnu:D, 5wnv:D, 4wpo:BD, 4wpo:DD, 4wq1:3E, 4wq1:32, 4wqf:BD, 4wqf:DD, 4wqr:3E, 4wqr:32, 4wqu:BD, 4wqu:DD, 4wqy:BD, 4wqy:DD, 4wr6:3E, 4wr6:32, 4wra:3E, 4wra:32, 4wro:3E, 4wro:32, 4wsd:3E, 4wsd:32, 4wsm:3E, 4wsm:32, 4wt1:3E, 4wt1:32, 4wt8:AD, 4wt8:BD, 4wu1:3E, 4wu1:32, 4wzd:3E, 4wzd:32, 4wzo:3E, 4wzo:32, 4x62:D, 4x64:D, 4x65:D, 4x66:D, 4xej:AS04, 4xej:BS04, 6xhv:1d, 6xhv:2d, 6xhw:1d, 6xhw:2d, 6xhx:1d, 6xhx:2d, 6xhy:1d, 6xhy:2d, 1xmo:D, 1xmq:D, 1xnq:D, 1xnr:D, 6xqd:1d, 6xqd:2d, 6xqe:1d, 6xqe:2d, 4y4o:1d, 4y4o:2d, 4y4p:1d, 4y4p:2d, 4yhh:D, 4ypb:QD, 4ypb:XD, 4yy3:D, 4yzv:QD, 4yzv:XD, 4z3s:1d, 4z3s:2d, 4z8c:1d, 4z8c:2d, 4zer:1d, 4zer:2d, 5zlu:J, 2zm6:D, 4zsn:QD, 4zsn:XD
4 8vlx:A 2431 22 0.2857 0.0041 0.4545 3.6
5 5c22:B 267 29 0.3143 0.0412 0.3793 5.6
6 8p5d:LB0 383 19 0.2857 0.0261 0.5263 6.1 8p60:LB0, 8p60:KB0, 7qca:LB0
7 7fih:R 550 30 0.3429 0.0218 0.4000 6.7
8 6u4b:A 570 20 0.2571 0.0158 0.4500 8.3
9 6e0o:A 273 30 0.2857 0.0366 0.3333 9.6 6e0n:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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