Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
LSASEALARRRSVRAFTDRPVDRALLARIFEIAQRAPSGGNLQPWQATVVTGERWQAVQDAVAARIVMGREGFQPEYDIF
PRGLTDPWDSRRFGVGEALYASLGIARDDKAGRIAQFQQNYRGFGAPVMLFLHCSRIMGPPQWADMGMWLQSVMLLLVEH
GLASCPQECWAMYGATVRAELGLGDDQILFSGLAIGHADEEAPVNRWPVPRVGLDEVIDWQGF

The query sequence (length=223) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7dp0:A 223 223 0.9955 0.9955 0.9955 1.04e-163 7dp0:B, 7dp1:A, 7dp1:B, 7dp2:A, 7dp2:B
2 3gr3:A 226 216 0.3543 0.3496 0.3657 2.09e-46 3gr3:B
3 2wzv:B 223 222 0.3632 0.3632 0.3649 1.09e-34 2wzv:A, 2wzw:A, 2wzw:B
4 3gfa:A 197 220 0.2556 0.2893 0.2591 2.51e-09 3gfa:B
5 1nox:A 200 50 0.1121 0.1250 0.5000 1.62e-06
6 2i7h:A 187 61 0.0987 0.1176 0.3607 3.27e-06 2i7h:B, 2i7h:C, 2i7h:D
7 3ge5:A 176 44 0.1031 0.1307 0.5227 3.30e-06 3ge5:B
8 4g8s:A 182 63 0.1300 0.1593 0.4603 5.99e-06 4g8s:B
9 4dn2:A 191 46 0.0987 0.1152 0.4783 1.68e-05 4dn2:B
10 5j62:B 209 61 0.0942 0.1005 0.3443 7.53e-05 5j62:A
11 3koq:A 173 46 0.0762 0.0983 0.3696 1.12e-04 3h4o:A, 3koq:B, 3koq:C, 3koq:D
12 3m5k:A 168 50 0.0717 0.0952 0.3200 1.39e-04 3m5k:B
13 1zch:A 249 77 0.1300 0.1165 0.3766 1.42e-04
14 5ko7:B 200 49 0.0807 0.0900 0.3673 4.04e-04
15 8cqt:B 164 43 0.0942 0.1280 0.4884 4.62e-04 8cqt:A
16 5ko8:B 218 51 0.0807 0.0826 0.3529 5.05e-04 5ko7:A, 5ko8:A, 5krd:A, 5krd:B
17 5j6c:A 173 44 0.0762 0.0983 0.3864 0.001 5j6c:B
18 3eo8:A 219 150 0.1390 0.1416 0.2067 0.001 3eo8:B, 3eo8:C, 3eo8:D, 3eo8:E, 3eo8:F
19 3ge6:A 210 55 0.0852 0.0905 0.3455 0.002 3ge6:B
20 3gbh:B 213 54 0.0807 0.0845 0.3333 0.002 3gbh:A, 3gbh:C, 3gbh:D
21 2isj:A 219 62 0.1166 0.1187 0.4194 0.002 2isj:B, 2isj:C, 2isj:D, 2isj:E, 2isj:F, 2isj:G, 2isj:H, 2isk:A, 2isk:B, 2isk:C, 2isk:D, 2isk:E, 2isk:F, 2isk:G, 2isk:H, 2isl:A, 2isl:B, 2isl:C, 2isl:D, 2isl:E, 2isl:F, 2isl:G, 2isl:H
22 2b67:A 201 42 0.0807 0.0896 0.4286 0.002 2b67:B, 2b67:C, 2b67:D
23 3gag:A 206 56 0.0987 0.1068 0.3929 0.005 3gag:B, 3gag:C, 3gag:D
24 4ttb:A 189 46 0.0762 0.0899 0.3696 0.007 4ttb:B
25 4ttc:A 220 46 0.0762 0.0773 0.3696 0.008 4ttc:B, 4ttc:C, 4ttc:D, 4ttc:E, 4ttc:F, 5yak:A, 5yak:F, 5yak:B, 5yak:C, 5yak:D, 5yak:E
26 3gb5:A 185 46 0.0762 0.0919 0.3696 0.009 3to0:A, 3to0:B
27 3tnz:A 222 46 0.0762 0.0766 0.3696 0.014 3gfd:A, 3gfd:B, 3gh8:A, 3gh8:B, 3gh8:C, 3gh8:D, 3gh8:E, 3gh8:F, 3gh8:G, 3gh8:H, 3tnz:B
28 3kwk:A 168 65 0.0807 0.1071 0.2769 0.020
29 8uc3:A 180 44 0.0762 0.0944 0.3864 0.025 8uc3:B
30 3pxv:B 189 206 0.2197 0.2593 0.2379 0.042 3pxv:A, 3pxv:C, 3pxv:D
31 6pz0:A 185 58 0.0807 0.0973 0.3103 0.044 6pz0:B, 6q1b:A, 6q1b:B, 6q1l:A, 6q1l:B, 6tyk:A, 6tyk:B
32 3ek3:A 187 48 0.0762 0.0909 0.3542 0.084
33 3e39:A 175 49 0.0807 0.1029 0.3673 0.14 3e39:B
34 2fre:A 200 37 0.0717 0.0800 0.4324 0.19 2fre:B
35 3bm1:A 177 69 0.1076 0.1356 0.3478 0.19 3bm1:B
36 4eo3:A 321 53 0.0897 0.0623 0.3774 0.20 4eo3:B
37 6smk:A 130 46 0.0717 0.1231 0.3478 0.20 6smk:B, 6smk:D, 6smk:C, 6smk:E
38 3e10:B 167 44 0.0673 0.0898 0.3409 0.21 3e10:A
39 5hdj:B 248 44 0.0583 0.0524 0.2955 0.26 5hdj:A
40 2ymv:A 327 37 0.0717 0.0489 0.4324 0.26
41 3qdl:A 178 48 0.0762 0.0955 0.3542 0.31 3qdl:B, 3qdl:C, 3qdl:D
42 8dil:A 175 69 0.1121 0.1429 0.3623 0.43 8dil:B, 8dil:C, 8dil:D, 8dil:E, 8dil:F
43 4xoq:A 204 69 0.1076 0.1176 0.3478 0.58 4xoo:A, 4xoo:B, 4xoo:C, 4xoo:D, 4xoq:B, 4xoq:C, 4xoq:D
44 5uu6:C 236 50 0.0717 0.0678 0.3200 0.72 5uu6:A, 5uu6:B, 5uu6:D
45 7yid:A 660 37 0.0583 0.0197 0.3514 0.87 7yid:B, 7yid:C, 7yid:D
46 5j8d:A 216 50 0.0673 0.0694 0.3000 1.4 5j8d:B, 5j8d:C, 5j8d:D, 5j8g:A, 5j8g:B, 5j8g:C, 5j8g:D, 1kqb:A, 1kqb:B, 1kqb:C, 1kqb:D, 1kqc:A, 1kqc:B, 1kqc:C, 1kqc:D, 1kqd:A, 1kqd:B, 1kqd:C, 1kqd:D, 1nec:A, 1nec:B, 1nec:C, 1nec:D
47 4qlx:A 217 55 0.0807 0.0829 0.3273 1.5 4qlx:B, 4qly:A, 4qly:B, 4qly:C, 4qly:D
48 1ds7:A 217 184 0.1839 0.1889 0.2228 1.5 8c5e:A, 8c5e:B, 8c5f:A, 8c5f:B, 8c5p:A, 8c5p:B, 8ccv:A, 8ccv:B, 8cj0:A, 8cj0:B, 1ds7:B, 1icr:A, 1icr:B, 1icu:A, 1icu:B, 1icu:C, 1icu:D, 1icv:A, 1icv:B, 1icv:C, 1icv:D, 1idt:A, 1idt:B, 8og3:A, 8og3:B, 1oo5:A, 1oo5:B, 1oo6:A, 1oo6:B, 1oon:A, 1oon:B, 1ooq:A, 1ooq:B, 8qes:A, 8qes:C, 8qes:B, 8qes:D, 8qpo:A, 8qpo:B, 8qpo:C, 8qpo:G, 8qpo:D, 8qpo:E, 8qpo:F, 8qpo:H, 3x21:A, 3x21:B, 3x21:C, 3x21:D, 3x21:E, 3x21:F, 3x21:G, 3x21:H, 3x21:I, 3x21:J, 3x22:A, 3x22:B, 7x32:A, 7x32:C, 7x32:B, 7x32:H, 7x32:D, 7x32:F, 7x32:E, 7x32:G, 7xww:B, 7xww:A, 7xww:H, 7xww:I, 1yki:A, 1yki:B, 1yki:C, 1yki:D, 1ylr:A, 1ylr:B, 1ylu:A, 1ylu:B
49 3bem:B 210 90 0.0852 0.0905 0.2111 1.6 3bem:A
50 7aor:aa 1558 43 0.0583 0.0083 0.3023 3.1
51 7zhh:A 219 53 0.0717 0.0731 0.3019 3.2
52 5hei:A 246 42 0.0717 0.0650 0.3810 5.3 5hei:B, 5hei:C, 5hei:D, 5hei:E, 5hei:F, 5hei:G, 5hei:H
53 5lq4:B 465 30 0.0448 0.0215 0.3333 5.5 5lq4:A, 8pz5:A, 8pz5:B
54 3k6h:A 191 54 0.0762 0.0890 0.3148 7.3 3k6h:B
55 7awm:A 412 42 0.0717 0.0388 0.3810 7.3 7awl:A, 7awn:A, 7awp:A, 7awq:A, 5llm:A, 5llu:A, 5lm4:A, 5mju:A
56 5jh0:D 157 45 0.0448 0.0637 0.2222 7.4 5jgh:A, 5jgh:D, 5jgh:G, 5jgh:J, 5jh0:A
57 7oy2:C 454 49 0.0762 0.0374 0.3469 8.1
58 7ose:A 503 49 0.0762 0.0338 0.3469 9.0 7ose:D
59 6hiv:DA 1557 44 0.0583 0.0083 0.2955 9.7 6hiw:DA, 7pub:DA

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218