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BioLiP
>protein
LSASEALARRRSVRAFTDRPVDRALLARIFEIAQRAPSGGNLQPWQATVVTGERWQAVQDAVAARIVMGREGFQPEYDIA
PRGLTDPWDSRRFGVGEALYASLKAGRIAQFQQNYRGFGAPVMLFLHCSRIMGPPQWADMGMWLQSVMLLLVEHGLASCP
QECWAMYGATVRAELGLGDDQILFSGLAIGHADEEAPVNRWPVPRVGLDEVIDWQGF

The query sequence (length=217) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7dp0:A 223 223 0.9954 0.9686 0.9686 4.18e-156 7dp0:B, 7dp1:A, 7dp1:B, 7dp2:A, 7dp2:B
2 3gr3:A 226 216 0.3502 0.3363 0.3519 7.09e-41 3gr3:B
3 2wzv:B 223 221 0.3687 0.3587 0.3620 2.83e-30 2wzv:A, 2wzw:A, 2wzw:B
4 3gfa:A 197 214 0.2535 0.2792 0.2570 5.93e-11 3gfa:B
5 1nox:A 200 50 0.1152 0.1250 0.5000 1.64e-06
6 2i7h:A 187 61 0.1014 0.1176 0.3607 2.90e-06 2i7h:B, 2i7h:C, 2i7h:D
7 3ge5:A 176 44 0.1060 0.1307 0.5227 3.07e-06 3ge5:B
8 4g8s:A 182 63 0.1336 0.1593 0.4603 6.08e-06 4g8s:B
9 4dn2:A 191 46 0.1014 0.1152 0.4783 1.63e-05 4dn2:B
10 1zch:A 249 77 0.1382 0.1205 0.3896 2.11e-05
11 5j62:B 209 61 0.0968 0.1005 0.3443 7.23e-05 5j62:A
12 3koq:A 173 46 0.0783 0.0983 0.3696 1.00e-04 3h4o:A, 3koq:B, 3koq:C, 3koq:D
13 3m5k:A 168 50 0.0737 0.0952 0.3200 1.12e-04 3m5k:B
14 5ko7:B 200 75 0.1106 0.1200 0.3200 2.11e-04
15 5ko8:B 218 51 0.0829 0.0826 0.3529 4.73e-04 5ko7:A, 5ko8:A, 5krd:A, 5krd:B
16 8cqt:B 164 43 0.0968 0.1280 0.4884 4.83e-04 8cqt:A
17 5j6c:A 173 44 0.0783 0.0983 0.3864 0.001 5j6c:B
18 3eo8:A 219 144 0.1382 0.1370 0.2083 0.001 3eo8:B, 3eo8:C, 3eo8:D, 3eo8:E, 3eo8:F
19 3ge6:A 210 55 0.0876 0.0905 0.3455 0.002 3ge6:B
20 3gbh:B 213 54 0.0829 0.0845 0.3333 0.002 3gbh:A, 3gbh:C, 3gbh:D
21 2isj:A 219 62 0.1198 0.1187 0.4194 0.002 2isj:B, 2isj:C, 2isj:D, 2isj:E, 2isj:F, 2isj:G, 2isj:H, 2isk:A, 2isk:B, 2isk:C, 2isk:D, 2isk:E, 2isk:F, 2isk:G, 2isk:H, 2isl:A, 2isl:B, 2isl:C, 2isl:D, 2isl:E, 2isl:F, 2isl:G, 2isl:H
22 2b67:A 201 42 0.0829 0.0896 0.4286 0.002 2b67:B, 2b67:C, 2b67:D
23 3gag:A 206 56 0.1014 0.1068 0.3929 0.004 3gag:B, 3gag:C, 3gag:D
24 4ttb:A 189 46 0.0783 0.0899 0.3696 0.007 4ttb:B
25 4ttc:A 220 46 0.0783 0.0773 0.3696 0.008 4ttc:B, 4ttc:C, 4ttc:D, 4ttc:E, 4ttc:F, 5yak:A, 5yak:F, 5yak:B, 5yak:C, 5yak:D, 5yak:E
26 3gb5:A 185 46 0.0783 0.0919 0.3696 0.009 3to0:A, 3to0:B
27 3pxv:B 189 200 0.2258 0.2593 0.2450 0.010 3pxv:A, 3pxv:C, 3pxv:D
28 3tnz:A 222 46 0.0783 0.0766 0.3696 0.013 3gfd:A, 3gfd:B, 3gh8:A, 3gh8:B, 3gh8:C, 3gh8:D, 3gh8:E, 3gh8:F, 3gh8:G, 3gh8:H, 3tnz:B
29 3kwk:A 168 63 0.0829 0.1071 0.2857 0.015
30 8uc3:A 180 44 0.0783 0.0944 0.3864 0.025 8uc3:B
31 6pz0:A 185 58 0.0829 0.0973 0.3103 0.042 6pz0:B, 6q1b:A, 6q1b:B, 6q1l:A, 6q1l:B, 6tyk:A, 6tyk:B
32 3ek3:A 187 48 0.0783 0.0909 0.3542 0.074
33 3e39:A 175 49 0.0829 0.1029 0.3673 0.13 3e39:B
34 3bm1:A 177 69 0.1106 0.1356 0.3478 0.19 3bm1:B
35 6smk:A 130 46 0.0737 0.1231 0.3478 0.19 6smk:B, 6smk:D, 6smk:C, 6smk:E
36 3e10:B 167 44 0.0691 0.0898 0.3409 0.20 3e10:A
37 4eo3:A 321 53 0.0922 0.0623 0.3774 0.21 4eo3:B
38 2fre:A 200 37 0.0737 0.0800 0.4324 0.22 2fre:B
39 2ymv:A 327 37 0.0737 0.0489 0.4324 0.26
40 5hdj:B 248 44 0.0599 0.0524 0.2955 0.28 5hdj:A
41 3qdl:A 178 48 0.0783 0.0955 0.3542 0.31 3qdl:B, 3qdl:C, 3qdl:D
42 8dil:A 175 69 0.1152 0.1429 0.3623 0.42 8dil:B, 8dil:C, 8dil:D, 8dil:E, 8dil:F
43 4xoq:A 204 69 0.1106 0.1176 0.3478 0.50 4xoo:A, 4xoo:B, 4xoo:C, 4xoo:D, 4xoq:B, 4xoq:C, 4xoq:D
44 5j8d:A 216 224 0.2258 0.2269 0.2188 0.58 5j8d:B, 5j8d:C, 5j8d:D, 5j8g:A, 5j8g:B, 5j8g:C, 5j8g:D, 1kqb:A, 1kqb:B, 1kqb:C, 1kqb:D, 1kqc:A, 1kqc:B, 1kqc:C, 1kqc:D, 1kqd:A, 1kqd:B, 1kqd:C, 1kqd:D, 1nec:A, 1nec:B, 1nec:C, 1nec:D
45 5uu6:C 236 50 0.0737 0.0678 0.3200 0.72 5uu6:A, 5uu6:B, 5uu6:D
46 4qlx:A 217 48 0.0783 0.0783 0.3542 1.4 4qlx:B, 4qly:A, 4qly:B, 4qly:C, 4qly:D
47 7aor:aa 1558 65 0.0783 0.0109 0.2615 1.9
48 5jh0:D 157 54 0.0507 0.0701 0.2037 2.5 5jgh:A, 5jgh:D, 5jgh:G, 5jgh:J, 5jh0:A
49 7zhh:A 219 53 0.0737 0.0731 0.3019 3.0
50 5hei:A 246 90 0.1290 0.1138 0.3111 3.1 5hei:B, 5hei:C, 5hei:D, 5hei:E, 5hei:F, 5hei:G, 5hei:H
51 1ds7:A 217 50 0.0691 0.0691 0.3000 3.8 8c5e:A, 8c5e:B, 8c5f:A, 8c5f:B, 8c5p:A, 8c5p:B, 8ccv:A, 8ccv:B, 8cj0:A, 8cj0:B, 1ds7:B, 1icr:A, 1icr:B, 1icu:A, 1icu:B, 1icu:C, 1icu:D, 1icv:A, 1icv:B, 1icv:C, 1icv:D, 1idt:A, 1idt:B, 8og3:A, 8og3:B, 1oo5:A, 1oo5:B, 1oo6:A, 1oo6:B, 1oon:A, 1oon:B, 1ooq:A, 1ooq:B, 8qes:A, 8qes:C, 8qes:B, 8qes:D, 8qpo:A, 8qpo:B, 8qpo:C, 8qpo:G, 8qpo:D, 8qpo:E, 8qpo:F, 8qpo:H, 3x21:A, 3x21:B, 3x21:C, 3x21:D, 3x21:E, 3x21:F, 3x21:G, 3x21:H, 3x21:I, 3x21:J, 3x22:A, 3x22:B, 7x32:A, 7x32:C, 7x32:B, 7x32:H, 7x32:D, 7x32:F, 7x32:E, 7x32:G, 7xww:B, 7xww:A, 7xww:H, 7xww:I, 1yki:A, 1yki:B, 1yki:C, 1yki:D, 1ylr:A, 1ylr:B, 1ylu:A, 1ylu:B
52 3k6h:A 191 196 0.1982 0.2251 0.2194 5.1 3k6h:B
53 5lq4:B 465 30 0.0461 0.0215 0.3333 5.4 5lq4:A, 8pz5:A, 8pz5:B
54 7ane:aa 1514 67 0.0922 0.0132 0.2985 5.6
55 7awm:A 412 38 0.0645 0.0340 0.3684 7.0 7awl:A, 7awn:A, 7awp:A, 7awq:A, 5llm:A, 5llu:A, 5lm4:A, 5mju:A
56 5clt:A 646 59 0.0922 0.0310 0.3390 7.3 5clt:B, 5clt:C, 5clw:A, 5clw:C, 5clw:B
57 6hiv:DA 1557 43 0.0599 0.0083 0.3023 9.3 6hiw:DA, 7pub:DA
58 6hiy:DA 1426 43 0.0599 0.0091 0.3023 9.6

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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