BioLiP

>protein
LNRIIEHMNAHHVEDMKGLLKKFGQVHHAENVAFKSVDSQGIVIGYNNNQTLRIEFNHEVKDPKDYKNATIELCQSVEKT
HDLKGVEEEVKAFKEGFDSVCLATLHPNGHVVCSYAPLMSDGKQYYIYVSEVAEHFAGLKNNPHNVEVMFLEDESKAKSA
ILRKRLRYKTNTRFIERGAEFDKAFDSFIEKTGGAGGIKTIRAMQDFHLIALDFKEGRFVKGFGQAYDILGDKIAYVGDK
GNPHNFAH

The query sequence (length=248) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	3gas:A	248	248	1.0000	1.0000	1.0000	0.0	3gas:B, 3gas:C, 3gas:D, 3gas:E, 3gas:F
2	3swj:A	246	245	0.5323	0.5366	0.5388	3.90e-88
3	8fm6:A	102	77	0.0806	0.1961	0.2597	0.009	8fm6:B, 8gbk:G, 8gbk:H, 8gbk:B, 8gbk:E, 8gbk:A, 8gbk:C, 8gbk:D, 8gbk:F, 8gdw:AAA, 8gdw:BBB, 8gdw:CCC, 8gdw:DDD, 8gf4:A, 8gf4:B, 8gf4:C, 8gf4:D
4	6m0a:B	256	78	0.0847	0.0820	0.2692	0.021	6m0a:A, 6m0a:C, 6m0a:D
5	5wtk:A	1215	69	0.0968	0.0198	0.3478	0.19	7dmq:A
6	9rub:A	459	74	0.0887	0.0479	0.2973	2.4	2rus:A, 9rub:B
7	7vyx:A	1211	107	0.1089	0.0223	0.2523	5.5	7vyx:B
8	7t1j:B	457	53	0.0726	0.0394	0.3396	6.9	7t1j:A, 7t1j:C, 7t1j:D, 7t1j:E, 7t1j:F, 7t1j:G, 7t1j:H, 7t1j:I, 7t1j:J, 7t1j:K, 7t1j:L
9	4j9v:A	456	31	0.0565	0.0307	0.4516	7.2	4j9u:H, 4j9u:G, 4j9u:E, 4j9u:F, 4j9v:B, 6v4k:E, 6v4k:F, 6v4k:G, 6v4k:H, 6v4l:C, 6v4l:D
10	4e6k:A	157	36	0.0484	0.0764	0.3333	7.9	5d8o:A, 5d8o:B, 5d8o:E, 5d8o:D, 5d8o:F, 5d8o:K, 5d8o:C, 5d8o:I, 5d8o:H, 5d8o:J, 5d8o:L, 5d8p:A, 5d8p:B, 5d8p:C, 5d8p:I, 5d8p:D, 5d8p:E, 5d8p:F, 5d8p:G, 5d8p:H, 5d8p:J, 5d8p:K, 5d8p:L, 5d8q:A, 5d8q:B, 5d8q:C, 5d8q:H, 5d8q:E, 5d8q:G, 5d8q:I, 5d8q:D, 5d8q:J, 5d8q:F, 5d8q:K, 5d8q:L, 5d8r:A, 5d8r:B, 5d8r:E, 5d8r:D, 5d8r:C, 5d8r:I, 5d8r:H, 5d8r:J, 5d8r:F, 5d8r:K, 5d8r:L, 5d8s:A, 5d8s:B, 5d8s:C, 5d8s:H, 5d8s:D, 5d8s:J, 5d8s:E, 5d8s:G, 5d8s:F, 5d8s:K, 5d8s:I, 5d8s:L, 5d8x:A, 5d8x:B, 5d8x:C, 5d8x:D, 5d8x:E, 5d8x:F, 5d8x:G, 5d8x:H, 5d8x:I, 5d8x:J, 5d8x:K, 5d8x:L, 5d8x:M, 5d8x:N, 5d8x:O, 5d8x:P, 5d8x:Q, 5d8x:R, 5d8x:S, 5d8x:T, 5d8x:U, 5d8x:V, 5d8x:W, 5d8x:X, 5d8y:A, 5d8y:B, 5d8y:C, 5d8y:D, 5d8y:E, 5d8y:F, 5d8y:G, 5d8y:H, 5d8y:I, 5d8y:J, 5d8y:K, 5d8y:L, 5d8y:M, 5d8y:N, 5d8y:O, 5d8y:P, 5d8y:Q, 5d8y:R, 5d8y:S, 5d8y:T, 5d8y:U, 5d8y:V, 5d8y:W, 5d8y:X, 4e6k:B, 4e6k:C, 4e6k:D, 4e6k:E, 4e6k:F, 3is7:A, 3is7:B, 3is7:C, 3is7:D, 3is7:E, 3is7:F, 3is7:G, 3is7:H, 3is7:I, 3is7:J, 3is7:K, 3is7:L, 3is7:M, 3is7:N, 3is7:O, 3is7:P, 3is7:Q, 3is7:R, 3is7:S, 3is7:T, 3is7:U, 3is7:V, 3is7:W, 3is7:X, 3is8:A, 3is8:B, 3is8:C, 3is8:D, 3is8:E, 3is8:F, 3is8:G, 3is8:H, 3is8:I, 3is8:J, 3is8:K, 3is8:L, 3is8:M, 3is8:N, 3is8:O, 3is8:P, 3is8:Q, 3is8:R, 3is8:S, 3is8:T, 3is8:U, 3is8:V, 3is8:W, 3is8:X, 3ise:A, 3ise:B, 3ise:H, 3ise:C, 3ise:D, 3ise:E, 3ise:F, 3ise:G, 3ise:I, 3ise:J, 3ise:K, 3ise:L, 3ise:M, 3ise:N, 3ise:X, 3ise:O, 3ise:P, 3ise:Q, 3ise:R, 3ise:S, 3ise:T, 3ise:U, 3ise:V, 3ise:W, 3isf:A, 3isf:B, 3isf:C, 3isf:D, 3isf:E, 3isf:F, 7k5e:A, 7k5e:B, 7k5e:E, 7k5e:C, 7k5e:I, 7k5e:D, 7k5e:F, 7k5e:K, 7k5e:G, 7k5e:H, 7k5e:J, 7k5e:L, 7k5f:A, 7k5f:B, 7k5f:E, 7k5f:C, 7k5f:I, 7k5f:D, 7k5f:F, 7k5f:K, 7k5f:H, 7k5f:J, 7k5f:L, 7k5g:A, 7k5g:B, 7k5g:E, 7k5g:C, 7k5g:I, 7k5g:D, 7k5g:F, 7k5g:K, 7k5g:H, 7k5g:J, 7k5g:L, 7k5h:A, 7k5h:B, 7k5h:E, 7k5h:C, 7k5h:I, 7k5h:D, 7k5h:F, 7k5h:K, 7k5h:H, 7k5h:J, 7k5h:L, 6nlg:B, 6nlg:A, 6nlg:C, 6nlg:D, 6nli:A, 6nli:E, 6nli:J, 6nli:K, 6nli:B, 6nli:C, 6nli:G, 6nli:L, 6nli:I, 6nli:D, 6nli:F, 6nli:H, 6nlj:D, 6nlj:B, 6nlj:E, 6nlj:F, 6nlj:K, 6nlk:A, 6nlk:E, 6nlk:J, 6nlk:K, 6nlk:B, 6nlk:C, 6nlk:G, 6nlk:L, 6nlk:I, 6nlk:D, 6nlk:F, 6nlk:H, 6nll:A, 6nll:E, 6nll:J, 6nll:K, 6nll:B, 6nll:C, 6nll:G, 6nll:L, 6nll:I, 6nll:D, 6nll:F, 6nll:H, 6nlm:A, 6nlm:E, 6nlm:J, 6nlm:K, 6nlm:B, 6nlm:C, 6nlm:G, 6nlm:L, 6nlm:I, 6nlm:D, 6nlm:F, 6nlm:H, 6nln:A, 6nln:E, 6nln:J, 6nln:K, 6nln:B, 6nln:C, 6nln:G, 6nln:L, 6nln:I, 6nln:D, 6nln:F, 6nln:H, 4to9:A, 4to9:B, 4to9:C, 4to9:D, 4to9:E, 4to9:F, 4to9:G, 4to9:H, 4to9:I, 4to9:J, 4to9:K, 4to9:L, 4to9:M, 4to9:N, 4to9:O, 4to9:P, 4to9:Q, 4to9:R, 4to9:S, 4to9:T, 4to9:U, 4to9:V, 4to9:W, 4to9:X, 4toa:A, 4toa:B, 4toa:C, 4toa:D, 4toa:E, 4toa:F, 4toa:G, 4toa:H, 4toa:I, 4toa:J, 4toa:K, 4toa:L, 4toa:M, 4toa:N, 4toa:O, 4toa:P, 4toa:Q, 4toa:R, 4toa:S, 4toa:T, 4toa:U, 4toa:V, 4toa:W, 4toa:X, 4tob:A, 4tob:B, 4tob:C, 4tob:D, 4tob:E, 4tob:F, 4tob:G, 4tob:H, 4tob:I, 4tob:J, 4tob:K, 4tob:L, 4tob:M, 4tob:N, 4tob:O, 4tob:P, 4tob:Q, 4tob:R, 4tob:S, 4tob:T, 4tob:U, 4tob:V, 4tob:W, 4tob:X, 4toc:A, 4toc:B, 4toc:C, 4toc:D, 4toc:J, 4toc:E, 4toc:F, 4toc:G, 4toc:H, 4toc:I, 4toc:Q, 4toc:K, 4toc:L, 4toc:M, 4toc:N, 4toc:O, 4toc:P, 4toc:R, 4toc:S, 4toc:T, 4toc:U, 4toc:V, 4toc:W, 4toc:X, 4tod:A, 4tod:B, 4tod:C, 4tod:D, 4tod:E, 4tod:F, 4tod:G, 4tod:H, 4tod:I, 4tod:J, 4tod:K, 4tod:L, 4tod:M, 4tod:N, 4tod:O, 4tod:P, 4tod:Q, 4tod:R, 4tod:S, 4tod:T, 4tod:U, 4tod:V, 4tod:W, 4tod:X, 4toe:A, 4toe:B, 4toe:C, 4toe:D, 4toe:E, 4toe:F, 4toe:G, 4toe:H, 4toe:I, 4toe:J, 4toe:K, 4toe:L, 4toe:M, 4toe:N, 4toe:O, 4toe:P, 4toe:Q, 4toe:R, 4toe:S, 4toe:T, 4toe:U, 4toe:V, 4toe:W, 4toe:X, 4tof:A, 4tof:B, 4tof:C, 4tof:D, 4tog:A, 4tog:B, 4tog:C, 4tog:D, 4toh:A, 4toh:B, 4toh:C, 4toh:D
11	8bc3:A	217	31	0.0444	0.0507	0.3548	8.2	8bc3:H, 8bc3:B, 8bc3:C, 8bc3:D, 8bc3:E, 8bc3:F, 8bc3:G, 8bc3:I, 8bc3:J, 8bc4:A, 8bc4:B, 8bc4:C, 8bc4:D, 8bc4:E, 8bc4:F, 8bc4:G, 8bc4:H, 8bc4:J
12	5gin:C	122	70	0.0685	0.1393	0.2429	8.7	5gin:D, 5gin:L, 5gio:C, 5gio:D, 5gio:L, 5gip:C, 5gip:D, 5gip:M, 5gip:N, 3id5:C, 3id5:G, 5jpq:U, 5jpq:V, 3pla:C, 3pla:D, 3pla:L

[Back]