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BioLiP
>protein
LGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEAN
AARK

The query sequence (length=84) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 8q7n:J 260 84 1.0000 0.3231 1.0000 7.43e-54 6ahd:J, 8h6k:4B, 8h6l:4B, 5o9z:E, 8qo9:J, 8qoz:J, 8qp8:J, 8qp9:J, 8qpa:J, 8qpb:J, 8qpe:J, 8qzs:J, 8r09:J, 8r0b:J, 8rm5:J
2 6qw6:4A 239 84 0.7976 0.2803 0.7976 1.49e-36 6qx9:4A
3 8y6o:N 228 36 0.4286 0.1579 1.0000 1.31e-17 8h6e:4B, 8h6j:4B, 8qxd:J, 8r08:J
4 8r0a:J 159 46 0.4048 0.2138 0.7391 1.55e-13
5 5nrl:G 372 81 0.4167 0.0941 0.4321 1.83e-10 3jcm:K, 4yhw:A, 4yhw:B, 5zwm:J, 5zwo:J
6 5gan:G 318 81 0.4167 0.1101 0.4321 7.44e-10 5gap:G
7 2o1u:A 578 62 0.1786 0.0260 0.2419 0.61 2o1u:B, 2o1v:A, 2o1v:B, 1tbw:B, 1tc0:B, 1tc6:B, 1yt0:A
8 5uls:A 650 62 0.1786 0.0231 0.2419 0.74 6aol:A, 6aom:A, 6aom:B, 6asp:A, 6asp:B, 6asq:A, 6asq:B, 6baw:B, 6baw:A, 6baw:C, 6baw:D, 6c91:C, 6c91:B, 6cyi:A, 6d1x:A, 6d28:A, 2esa:A, 2exl:A, 2exl:B, 2fyp:A, 2fyp:B, 2gfd:A, 2gfd:B, 2gqp:A, 2gqp:B, 2h8m:A, 2h8m:B, 2hch:A, 2hch:B, 2hg1:A, 2hg1:B, 5in9:A, 5in9:B, 4nh9:A, 3o2f:A, 3o2f:B, 1qy8:A, 1qye:A, 1tbw:A, 1tc0:A, 1tc6:A, 5ttz:A, 5ttz:B, 1u0z:A, 1u0z:B, 1u2o:A, 1u2o:B, 5uls:B, 7ull:A, 7ull:B, 5wmt:A, 5wmt:B, 5wmt:C, 5wmt:D, 1ysz:A
9 6tux:A 330 57 0.1548 0.0394 0.2281 0.80 6tuw:A, 6tux:B
10 8q7n:F 431 64 0.2024 0.0394 0.2656 5.4 5o9z:F, 8qpa:F
11 3fzy:A 216 27 0.1071 0.0417 0.3333 5.5 3eeb:A, 3eeb:B, 3fzy:B, 3gcd:A, 3gcd:B, 3gcd:C, 3gcd:D, 8yja:A, 8yja:B, 8yjc:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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