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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
LFAEPNLKQITVWARGVVMNKDARDIVVALTEAAAKEGKYVQAWENYVDLPDRIYVPVRAYARISSDPIESKYIYENETP
DIVVLVEESLIKGVPILKGIRPGSTLVVNTKRSIDTILEFLGDTGNLAQIVTVDANSMAIAAPIAGAVVKATGIVDVENL
AAVVKNPAAMRRGYAEAQVRQLPVSATELLRQMPFAGTVPSPVTENEGMVTGNWRIQRPIIDREACTECYTCWIYCPDSC
ITRTEEGPVFNMKYCKGCGLCTAVCPSGALTNVPELDFKD

The query sequence (length=280) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5exd:H 291 290 1.0000 0.9622 0.9655 0.0 5exd:B, 5exd:K, 5exe:E
2 5c4i:E 312 308 1.0000 0.8974 0.9091 0.0 5c4i:B, 5exd:E, 5exe:B
3 7np8:B 620 53 0.0679 0.0306 0.3585 0.002 7np8:A, 7np8:C, 7np8:D
4 7np8:B 620 54 0.0607 0.0274 0.3148 0.21 7np8:A, 7np8:C, 7np8:D
5 7np8:B 620 17 0.0393 0.0177 0.6471 4.7 7np8:A, 7np8:C, 7np8:D
6 1gth:A 1019 51 0.0643 0.0177 0.3529 0.002 8f5w:A, 8f5w:B, 8f5w:C, 8f5w:D, 8f61:A, 8f61:B, 8f61:C, 8f61:D, 8f6n:A, 8f6n:B, 8f6n:C, 8f6n:D, 1gt8:A, 1gt8:B, 1gt8:C, 1gt8:D, 1gte:A, 1gte:B, 1gte:C, 1gte:D, 1gth:B, 1gth:C, 1gth:D, 1h7w:A, 1h7w:B, 1h7w:C, 1h7w:D, 1h7x:A, 1h7x:B, 1h7x:C, 1h7x:D, 7ljs:A, 7ljs:B, 7ljs:C, 7ljs:D, 7ljt:A, 7ljt:B, 7ljt:C, 7ljt:D, 7lju:A, 7lju:C, 7lju:D, 7lju:B, 7m31:A, 7m31:B, 7m31:C, 7m31:D, 7m32:A, 7m32:B, 7m32:C, 7m32:D
7 7p63:I 180 67 0.0786 0.1222 0.3284 0.003 7awt:I, 7nyr:I, 7nyu:I, 7nyv:I, 7nz1:I, 7p61:I, 7p62:I, 7p64:I, 7p69:I, 7p7c:I, 7p7e:I, 7p7j:I, 7p7k:I, 7p7l:I, 7p7m:I, 7z7r:I, 7z7s:I, 7z7t:I, 7z7v:I, 7z80:I, 7z83:I, 7z84:I, 7zc5:I, 7zci:I
8 7bkd:A 664 51 0.0679 0.0286 0.3725 0.011 7bkb:A, 7bkb:a, 7bkc:A, 7bkc:a, 7bkd:a, 7bke:A, 7bke:a
9 7bkd:A 664 27 0.0429 0.0181 0.4444 4.0 7bkb:A, 7bkb:a, 7bkc:A, 7bkc:a, 7bkd:a, 7bke:A, 7bke:a
10 1bc6:A 77 52 0.0679 0.2468 0.3654 0.012 1bd6:A, 1bqx:A, 1bwe:A
11 5odc:A 653 54 0.0821 0.0352 0.4259 0.013 5odc:G, 5odh:A, 5odh:G, 5odi:A, 5odi:G, 5odq:A, 5odq:G, 5odr:A, 5odr:G
12 6u8y:N 176 109 0.1000 0.1591 0.2569 0.014 6u8y:n
13 7arc:I 199 95 0.0929 0.1307 0.2737 0.020 7ard:I
14 7npa:A 618 53 0.0607 0.0275 0.3208 0.020 7npa:B, 7npa:C, 7npa:D, 7npa:E, 7npa:F, 7npa:G, 7npa:H, 7npa:I, 7npa:J, 7npa:K, 7npa:L, 7npa:M, 7npa:N, 7npa:O, 7npa:P
15 7npa:A 618 52 0.0571 0.0259 0.3077 0.050 7npa:B, 7npa:C, 7npa:D, 7npa:E, 7npa:F, 7npa:G, 7npa:H, 7npa:I, 7npa:J, 7npa:K, 7npa:L, 7npa:M, 7npa:N, 7npa:O, 7npa:P
16 7npa:A 618 17 0.0393 0.0178 0.6471 2.7 7npa:B, 7npa:C, 7npa:D, 7npa:E, 7npa:F, 7npa:G, 7npa:H, 7npa:I, 7npa:J, 7npa:K, 7npa:L, 7npa:M, 7npa:N, 7npa:O, 7npa:P
17 6cfw:N 121 28 0.0429 0.0992 0.4286 0.023
18 1hfe:L 396 65 0.0786 0.0556 0.3385 0.024 8bj7:A, 8bj8:A, 1e08:A, 1gx7:A, 1hfe:M, 6sg2:AAA
19 8e9i:I 166 97 0.1071 0.1807 0.3093 0.034 8e9g:I, 8e9h:I
20 8iuf:S8 182 65 0.0679 0.1044 0.2923 0.035 8j9h:S8, 8j9i:S8, 8j9j:S8
21 8e73:S8 181 77 0.0786 0.1215 0.2857 0.039 7a23:D, 7a24:D, 7aqr:I, 7ar7:I, 7ar8:I, 7arb:I, 8bee:I, 8bpx:I, 8bq5:I, 8bq6:I, 6x89:S8
22 7p8n:B 613 91 0.0964 0.0440 0.2967 0.045 7p5h:B, 7p5h:E, 7p5h:b, 7p5h:e, 7p8n:b, 7p91:b, 7p91:B, 7p92:B
23 7p8n:B 613 37 0.0571 0.0261 0.4324 0.43 7p5h:B, 7p5h:E, 7p5h:b, 7p5h:e, 7p8n:b, 7p91:b, 7p91:B, 7p92:B
24 7q5y:D 197 60 0.0679 0.0964 0.3167 0.046 7q5y:J, 7q5y:P, 7q5y:V
25 7koe:D 92 56 0.0679 0.2065 0.3393 0.050 7koe:H
26 7ak5:I 178 116 0.1071 0.1685 0.2586 0.055 7ak6:I, 7b93:I, 8c2s:I, 8ca3:I, 8ca5:I, 7dgq:E, 7dgr:E, 7dgs:E, 7dgz:E, 7dh0:E, 7dkf:E2, 6g2j:I, 6g72:I, 5gpn:b, 5gup:H, 8iao:I, 8iap:I, 8ib4:I, 8ib5:I, 8ib9:I, 8iba:I, 8ibd:I, 8ibe:I, 8ic2:I, 8ic3:I, 5lc5:I, 5ldw:I, 5ldx:I, 5lnk:9, 5o31:I, 8olt:I, 8om1:I, 7psa:I, 8pw5:9, 8pw6:9, 8pw7:9, 8q0a:I, 8q0f:I, 8q0j:I, 8q0m:I, 8q0o:I, 8q0q:I, 8q1p:I, 8q1u:I, 8q1y:I, 8q25:I, 8q45:I, 8q46:I, 8q47:I, 8q48:I, 8q49:I, 8q4a:I, 6q9d:S8, 6qa9:S8, 6qbx:S8, 6qc2:S8, 6qc3:S8, 6qc4:S8, 6qc5:S8, 6qc6:S8, 6qc7:S8, 6qc8:S8, 6qc9:S8, 6qca:S8, 6qcf:S8, 7qsd:I, 7qsk:I, 7qsl:I, 7qsm:I, 7qsn:I, 7qso:I, 7r41:I, 7r42:I, 7r43:I, 7r44:I, 7r45:I, 7r46:I, 7r47:I, 7r48:I, 7r4c:I, 7r4d:I, 7r4f:I, 7r4g:I, 8rgp:9, 8rgq:9, 8rgr:9, 8rgt:9, 8ud1:1I, 8ueo:1I, 8uep:1I, 8ueq:1I, 8uer:1I, 8ues:1I, 8uet:1I, 8ueu:1I, 8uev:1I, 8uew:1I, 8uex:1I, 8uey:1I, 8uez:1I, 8ugh:1I, 8ugi:1I, 8ugj:1I, 8ugn:1I, 8ugn:5I, 8ugp:1I, 8ugr:1I, 8ugr:5I, 7v2c:B, 7v2d:B, 7v2e:B, 7v2f:B, 7v2h:B, 7v2k:B, 7v2r:B, 7v30:B, 7v31:B, 7v32:B, 7v33:B, 7v3m:B, 7vb7:B, 7vbn:B, 7vbz:B, 7vwj:B, 7vxp:B, 7vxu:B, 7vy8:B, 7vya:B, 7vyf:B, 7vyh:B, 7vyn:B, 7vz1:B, 7vzv:B, 7vzw:B, 7w00:B, 7w0h:B, 7w0r:B, 7w0y:B, 7w1o:B, 7w1p:B, 7w1t:B, 7w1u:B, 7w1v:B, 7w1z:B, 7w20:B, 7w2k:B, 7w2l:B, 7w2r:B, 7w2u:B, 7w2y:B, 7w31:B, 7w32:B, 7w35:B, 7w4c:B, 7w4d:B, 7w4e:B, 7w4f:B, 7w4g:B, 7w4j:B, 7w4k:B, 7w4l:B, 7w4m:B, 7w4n:B, 7w4q:B, 5xtb:B, 5xtd:B, 5xth:B, 5xti:B, 5xti:BB, 7zd6:9, 7zdh:9, 7zdj:9, 7zdm:9, 7zdp:9, 7zeb:9, 6zk9:9, 6zkc:9, 6zkd:9, 6zke:9, 6zkf:9, 6zkg:9, 6zkh:9, 6zki:9, 6zkj:9, 6zkk:9, 6zkl:9, 6zkm:9, 6zkn:9, 6zko:9, 6zkp:9, 6zkq:9, 6zkr:9, 6zks:9, 6zkt:9, 6zku:9, 6zkv:9, 6zr2:I, 6ztq:I
27 7zc6:B 202 120 0.1286 0.1782 0.3000 0.063
28 7zc6:B 202 78 0.0893 0.1238 0.3205 0.095
29 6cin:B 1169 308 0.2464 0.0590 0.2240 0.064 6cin:A, 6cin:C, 6cin:D, 6cin:E, 6cin:F, 6cio:A, 6cio:B, 6cio:C, 6cio:D, 6cio:E, 6cio:F, 6cip:A, 6cip:B, 6cip:C, 6cip:D, 6cip:E, 6cip:F, 6ciq:A, 6ciq:B, 6ciq:C
30 7plm:A 1177 264 0.2214 0.0527 0.2348 0.076 7plm:B
31 8b9z:I 186 138 0.1214 0.1828 0.2464 0.083 8ba0:I, 8esw:S8, 8esz:S8
32 7bkc:K 321 67 0.0964 0.0841 0.4030 0.095 7bkc:k
33 7bkc:K 321 68 0.0679 0.0592 0.2794 2.8 7bkc:k
34 7bkc:K 321 23 0.0321 0.0280 0.3913 7.4 7bkc:k
35 4omf:G 231 51 0.0536 0.0649 0.2941 0.11 4ci0:B, 3zfs:B
36 8a6t:B 630 51 0.0643 0.0286 0.3529 0.11 8a6t:E, 8bew:B, 8bew:E
37 7bkb:K 386 67 0.0964 0.0699 0.4030 0.17 7bkb:k, 7bkc:M, 7bkc:m
38 7bkb:K 386 80 0.0821 0.0596 0.2875 0.38 7bkb:k, 7bkc:M, 7bkc:m
39 7bkb:K 386 68 0.0679 0.0492 0.2794 4.8 7bkb:k, 7bkc:M, 7bkc:m
40 7bkb:K 386 23 0.0321 0.0233 0.3913 9.3 7bkb:k, 7bkc:M, 7bkc:m
41 3bk7:A 593 69 0.0786 0.0371 0.3188 0.18 3j15:B, 5lw7:B, 1yqt:A, 5yv5:A
42 6qgr:G 253 94 0.0929 0.1028 0.2766 0.21 6qgt:G, 6qii:G
43 6qgr:G 253 86 0.0750 0.0830 0.2442 2.1 6qgt:G, 6qii:G
44 7qv7:D 448 50 0.0679 0.0424 0.3800 0.28 7qv7:K, 7qv7:Q, 7qv7:R, 7qv7:V, 7qv7:Z
45 7q4v:B 599 52 0.0536 0.0250 0.2885 0.37 8a5e:B, 7q4v:F, 7q4w:B, 7q4w:F
46 7q4v:B 599 22 0.0357 0.0167 0.4545 2.9 8a5e:B, 7q4v:F, 7q4w:B, 7q4w:F
47 1dur:A 55 49 0.0643 0.3273 0.3673 0.38
48 7z0s:B 170 39 0.0536 0.0882 0.3846 0.39 7z0t:B
49 8oh5:B 584 46 0.0571 0.0274 0.3478 0.40 8oh5:E, 8oh5:H, 8oh5:K, 8oh9:B, 8oh9:E, 8oh9:H, 8oh9:K
50 1clf:A 55 46 0.0571 0.2909 0.3478 0.42
51 5t61:L 348 60 0.0714 0.0575 0.3333 0.43 5t5i:F, 5t5i:N, 5t5m:F, 5t61:F, 5t61:R, 5t61:X, 5t61:d, 5t61:j, 5t61:p, 5t61:v
52 5t61:L 348 69 0.0750 0.0603 0.3043 4.9 5t5i:F, 5t5i:N, 5t5m:F, 5t61:F, 5t61:R, 5t61:X, 5t61:d, 5t61:j, 5t61:p, 5t61:v
53 5t61:L 348 103 0.0964 0.0776 0.2621 6.1 5t5i:F, 5t5i:N, 5t5m:F, 5t61:F, 5t61:R, 5t61:X, 5t61:d, 5t61:j, 5t61:p, 5t61:v
54 5t61:L 348 60 0.0679 0.0546 0.3167 7.7 5t5i:F, 5t5i:N, 5t5m:F, 5t61:F, 5t61:R, 5t61:X, 5t61:d, 5t61:j, 5t61:p, 5t61:v
55 7z0s:F 164 67 0.0750 0.1280 0.3134 0.55 7z0t:F
56 1kqf:B 289 65 0.0786 0.0761 0.3385 0.57 1kqg:B
57 6fah:E 393 48 0.0607 0.0433 0.3542 0.62 6fah:A
58 8qby:I 159 77 0.0750 0.1321 0.2727 0.78
59 1fca:A 55 44 0.0571 0.2909 0.3636 0.82 1fdn:A, 2fdn:A
60 4hea:9 180 73 0.0786 0.1222 0.3014 0.88 2fug:9, 2fug:G, 2fug:P, 2fug:Y, 4hea:O, 6i0d:9, 6i0d:O, 6i1p:9, 6i1p:O, 3i9v:9, 3i9v:G, 3iam:9, 3iam:G, 3ias:9, 3ias:G, 3ias:P, 3ias:Y, 3m9s:9, 3m9s:G, 6q8o:9, 6q8o:O, 6q8w:9, 6q8w:O, 6q8x:9, 6q8x:O, 6y11:9, 6y11:O, 2ybb:8, 6ziy:9, 6zjl:9, 6zjn:9, 6zjy:9
61 7b0n:I 191 77 0.0714 0.1047 0.2597 0.92 6gcs:I, 7o6y:I, 7o71:I, 6rfq:I, 6rfr:I, 6rfs:I, 6y79:I, 6yj4:I
62 8rbq:C 477 94 0.0929 0.0545 0.2766 0.93 8ahx:C, 8rb8:C, 8rb9:C, 8rbm:C
63 3gyx:B 166 66 0.0821 0.1386 0.3485 0.94 3gyx:D, 3gyx:F, 3gyx:H, 3gyx:J, 3gyx:L
64 5odc:C 184 24 0.0429 0.0652 0.5000 1.4 5odc:I, 5odh:C, 5odh:I, 5odi:C, 5odi:I, 5odq:C, 5odq:I, 5odr:C, 5odr:I
65 5g2v:A 494 118 0.1000 0.0567 0.2373 1.4
66 8b6f:AL 218 79 0.0786 0.1009 0.2785 1.4 8bqs:AL, 8gym:s8, 8gym:S8, 8gzu:s8, 8gzu:S8, 7tgh:S8
67 7q5y:A 626 264 0.2036 0.0911 0.2159 1.4 7q5y:G, 7q5y:M, 7q5y:S
68 7bkb:E 411 80 0.0750 0.0511 0.2625 1.6 7bkb:e, 7bkc:E, 7bkc:e, 7bkd:E, 7bke:E
69 8hac:B 327 64 0.0643 0.0550 0.2812 1.6 8hac:A
70 8c8v:A 1032 96 0.1000 0.0271 0.2917 1.8 8c8u:A, 8c8w:A, 8c9d:A
71 8a8o:D 102 16 0.0393 0.1078 0.6875 1.8 8a8o:C
72 8a8o:D 102 49 0.0500 0.1373 0.2857 7.7 8a8o:C
73 7o80:Bz 595 22 0.0429 0.0202 0.5455 1.9 7a09:J, 6hcf:k1, 6hcm:k1, 3jag:jj, 3jah:jj, 3jai:jj, 5lzv:jj, 8p03:k, 8p09:k, 8scb:jj, 6yal:k, 6yam:k, 6zme:CI, 6zvj:1
74 8ioy:A 816 82 0.0929 0.0319 0.3171 1.9
75 7zm7:I 185 77 0.0714 0.1081 0.2597 2.0 7zmb:I, 7zmg:I
76 8ahx:B 113 56 0.0536 0.1327 0.2679 2.1 8rb8:B, 8rb9:B, 8rbq:B
77 7bkb:L 79 63 0.0571 0.2025 0.2540 2.2 7bkb:l, 7bkc:L, 7bkc:l
78 4zn3:A 147 121 0.1107 0.2109 0.2562 2.6
79 7si6:A 873 89 0.0929 0.0298 0.2921 2.9 7si3:A, 7si7:A
80 6hum:I 193 26 0.0429 0.0622 0.4615 3.8 6khi:I, 6khj:I, 6l7o:I, 6l7p:I, 6nbq:I, 6nbx:I, 6nby:I, 6tjv:I
81 2lcq:A 161 55 0.0500 0.0870 0.2545 3.9
82 6h8k:I 137 62 0.0643 0.1314 0.2903 4.1
83 6tmf:d 582 30 0.0429 0.0206 0.4000 4.2 3ozx:A, 3ozx:B
84 5d6s:A 370 62 0.0536 0.0405 0.2419 5.4 5d6s:B, 5d6s:C, 5d6s:D, 5d6s:E
85 1gws:A 503 61 0.0750 0.0417 0.3443 6.0 2cvc:A, 1h29:A, 1h29:B, 1h29:C, 1h29:D
86 7wfg:I 160 32 0.0464 0.0813 0.4062 6.2 7wg5:I
87 7p8n:a 642 40 0.0500 0.0218 0.3500 7.1 7p5h:A, 7p5h:D, 7p5h:a, 7p5h:d, 7p8n:A, 7p91:a, 7p91:A, 7p92:A
88 8a5e:A 583 105 0.1036 0.0497 0.2762 8.0 8a5e:D, 7q4v:A, 7q4v:E, 7q4w:A, 7q4w:E
89 7vw6:A 913 23 0.0393 0.0120 0.4783 8.7 7e5z:A, 8j83:A, 7xqw:A
90 1b0p:A 1231 51 0.0536 0.0122 0.2941 8.9 1b0p:B, 2c3m:A, 2c3m:B, 2c3o:A, 2c3o:B, 2c3p:A, 2c3p:B, 2c3u:A, 2c3u:B, 2c3y:A, 2c3y:B, 2c42:A, 2c42:B, 1kek:A, 1kek:B, 2pda:A, 2pda:B, 2uza:A, 2uza:B
91 7qv7:B 183 46 0.0536 0.0820 0.3261 8.9 7qv7:C, 7qv7:J, 7qv7:N, 7qv7:P, 7qv7:X
92 4xdd:A 582 77 0.0679 0.0326 0.2468 9.8 8aio:A, 8aio:B, 8aj6:A, 8aj6:B, 8aln:A, 8aln:B, 8ap2:A, 8ap2:B, 5byq:A, 5byq:B, 5byr:A, 5byr:B, 5bys:A, 5bys:B, 1c4a:A, 1c4c:A, 3c8y:A, 8cjy:A, 8cjy:B, 1feh:A, 6gly:A, 6gly:B, 6glz:A, 6glz:B, 6gm0:A, 6gm0:B, 6gm1:A, 6gm1:B, 6gm2:A, 6gm2:B, 6gm3:A, 6gm3:B, 6gm4:A, 6gm4:B, 6gm8:A, 6gm8:B, 6h63:A, 6h63:B, 5la3:A, 5la3:B, 6n59:A, 6n6p:A, 6nac:A, 5oef:A, 5oef:B, 8pvm:A, 8pvm:B, 7qhf:A, 7qhf:B, 8qm3:A, 8qm3:B, 4xdc:A, 4xdc:B, 4xdd:B, 6yf4:A, 6yf4:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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