BioLiP

>protein
LDFPEYDGVDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAV
AKKLGLTEVDSMYVFKGDEVIEYDGEFSADTIVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKSKDSEHYKAF
EDAAEEFHPYIPFFATFDSKVAKKLTLKLNEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKPESMYETWE
DDMDGIHIVAFAEEADPDGFEFLETLKAVAQDNTENPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDADSV
WMEMDDEEDLPSAEELEDWLEDVLEGEINTE

The query sequence (length=351) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	5crg:A	354	351	0.9972	0.9887	0.9972	0.0	5crd:A, 5cre:A, 5crg:B, 5crg:C, 5crg:D, 5crh:A, 5crh:B, 5kn0:A, 5kn0:B, 5kn0:C, 5kn0:D, 5kn1:A, 5kn1:B, 5kn1:C, 5kn2:A, 5kn2:B, 5kn2:C, 5kn3:A, 3trp:A, 3trq:A, 3uom:A, 3uom:B, 3uom:C, 3uom:D, 3uom:E, 3uom:F, 3us3:A, 3v1w:A
2	7f05:C	355	351	0.6866	0.6789	0.6866	1.89e-177	7f05:B, 7f05:A, 7f05:D
3	5xwm:D	368	136	0.0969	0.0924	0.2500	4.56e-08	5xwm:A, 5xwm:C, 5xwm:B
4	6i7s:B	462	149	0.1140	0.0866	0.2685	1.0	6i7s:A
5	7s3l:A	254	82	0.0684	0.0945	0.2927	1.2
6	6te4:A	564	59	0.0456	0.0284	0.2712	4.0
7	1z7e:D	644	37	0.0342	0.0186	0.3243	4.3	2bln:A, 2bln:B, 5j63:A, 5j63:B, 5j63:C, 5j63:D, 1z7e:A, 1z7e:B, 1z7e:C, 1z7e:E, 1z7e:F
8	3fhm:A	136	30	0.0427	0.1103	0.5000	4.8	3fhm:D, 3fhm:B, 3fhm:C
9	6pgn:A	297	74	0.0712	0.0842	0.3378	5.8	5tu4:A, 5tu5:A, 5tu6:A
10	8gjh:A	639	37	0.0342	0.0188	0.3243	6.3	8gjh:B, 8gjh:C, 8gjh:D, 8gjh:E, 8gjh:F
11	1zmr:A	386	47	0.0484	0.0440	0.3617	9.4
12	5ayk:A	744	54	0.0427	0.0202	0.2778	9.7	5ayl:A

[Back]