Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
LCRLCPWDWTFLLGNCYFFSKSQRNWNDAVTACKEVKAQLVIINSDEEQTFLQQTSKAKGPTWMGLSDLKKEATWLWVDG
STLSSRFQKYWNRGEPNNIGEEDCVEFAGDGWNDSKCELKKFWICKKSATPCT

The query sequence (length=133) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4c9f:D 134 133 1.0000 0.9925 1.0000 1.43e-96 4c9f:A, 4c9f:B, 4c9f:C, 4caj:A, 4caj:B, 4caj:C, 4caj:D, 3zhg:A, 3zhg:B, 3zhg:C, 3zhg:D
2 6ghv:D 133 133 0.6917 0.6917 0.6917 1.97e-66 6ghv:A, 6ghv:B, 6ghv:C, 6ghv:E, 6ghv:F, 2it5:A, 2it6:A, 1k9i:A, 1k9i:C, 1k9i:D, 1k9i:E, 1k9i:H, 1k9i:B, 1k9i:F, 1k9i:G, 1k9i:I, 1k9i:J, 7nl6:A, 7nl7:A, 1sl4:A, 1sl5:A, 2xr5:A, 2xr6:A
3 1sl6:A 168 131 0.6466 0.5119 0.6565 1.98e-62 1k9j:A, 1sl6:B, 1sl6:C, 1sl6:D, 1sl6:E, 1sl6:F, 1xph:A
4 3wh2:A 132 128 0.3759 0.3788 0.3906 5.78e-25 3wh3:A
5 6py1:A 130 129 0.3985 0.4077 0.4109 2.04e-24 6puv:A, 6w12:A, 6xiy:A
6 4gko:L 136 133 0.3835 0.3750 0.3835 2.06e-23 4g9a:A, 4g9a:B, 4g9a:C, 4g9a:D, 4gko:G, 4gko:H, 4gko:I, 4gko:J, 4gko:K, 2h2t:B
7 6pwr:A 129 133 0.3835 0.3953 0.3835 9.94e-23 6pws:A, 6pwt:A
8 8h4v:A 148 128 0.3383 0.3041 0.3516 1.62e-22 8h4v:B, 8hb5:A, 5kth:A, 5kti:A, 4kzv:A, 4kzv:B, 4kzw:A, 4kzw:B, 4zrv:A, 4zrv:C, 4zrv:B, 4zrw:A
9 6jjj:A 151 134 0.3759 0.3311 0.3731 3.27e-22 6jjj:B, 6jjj:C, 6jjj:D, 6jjj:E, 6jjj:F
10 8urf:A 128 130 0.3910 0.4062 0.4000 2.81e-21
11 4zes:A 147 126 0.3383 0.3061 0.3571 1.50e-20 4zes:B, 4zet:A, 4zet:B
12 5jq1:A 130 131 0.3835 0.3923 0.3893 2.12e-20 1dv8:A, 5jpv:A, 5jpv:B, 5jq1:B, 8ts0:A, 6yau:A
13 2ox9:C 131 129 0.3383 0.3435 0.3488 1.32e-19 2ox9:A, 2ox9:B, 2ox9:D
14 5k8y:A 136 124 0.3233 0.3162 0.3468 2.18e-19 5k8y:B, 5m62:A, 5m62:B
15 2ox8:A 129 129 0.3308 0.3411 0.3411 9.85e-19 2ox8:B, 2ox8:C, 2ox8:D
16 5vyb:A 143 127 0.3158 0.2937 0.3307 1.79e-18
17 6jk4:A 126 128 0.3158 0.3333 0.3281 2.49e-18
18 3whd:C 148 130 0.3008 0.2703 0.3077 2.69e-18 3whd:A
19 2py2:A 127 127 0.3083 0.3228 0.3228 2.56e-17 2py2:B, 2py2:C, 2py2:D, 2py2:E, 2py2:F
20 5b1w:A 130 128 0.3083 0.3154 0.3203 1.27e-16 5b1w:B, 5b1w:C, 5b1w:D, 5b1x:A, 5b1x:B, 5b1x:C, 5b1x:D
21 3kqg:A 169 136 0.3083 0.2426 0.3015 5.91e-16 4ak8:A, 4ak8:B, 4ak8:C, 4ak8:D, 3c22:A, 3c22:B, 3c22:C, 3c22:D, 5g6u:A, 5g6u:B, 5g6u:D, 5g6u:C, 3kqg:B, 3kqg:C, 3kqg:D, 3kqg:E, 3kqg:F, 4n32:A, 4n32:B, 4n32:C, 4n32:D, 4n33:A, 4n33:B, 4n33:C, 4n33:D, 4n34:A, 4n34:B, 4n34:C, 4n34:D, 4n35:A, 4n35:B, 4n35:C, 4n35:D, 4n36:A, 4n36:B, 4n36:C, 4n36:D, 4n37:A, 4n37:B, 4n37:C, 4n37:D, 4n38:A, 4n38:B, 4n38:C, 4n38:D, 3p5d:A, 3p5d:B, 3p5d:C, 3p5d:D, 3p5e:A, 3p5e:B, 3p5e:C, 3p5e:D, 3p5f:B, 3p5f:C, 3p5f:A, 3p5f:D, 3p5g:A, 3p5g:B, 3p5g:C, 3p5g:D, 3p5h:B, 3p5h:D, 3p5h:A, 3p5h:C, 3p5i:A, 3p5i:B, 3p5i:C, 3p5i:D, 3p7f:A, 3p7f:B, 3p7f:C, 3p7f:D, 3p7g:A, 3p7g:B, 3p7g:C, 3p7g:D, 3p7h:A, 3p7h:B, 3p7h:C, 3p7h:D, 7ytq:A, 7ytq:B, 7ytq:C, 7ytq:D
22 6tl9:F 130 127 0.3308 0.3385 0.3465 3.18e-15 6tl9:B, 6tl9:C, 6tl9:G
23 3vyk:A 128 127 0.3083 0.3203 0.3228 5.36e-15
24 6lfj:A 133 130 0.3158 0.3158 0.3231 2.26e-14 6kzr:A, 6kzr:B, 6lfj:B, 6lkr:A, 6lkr:B
25 5e4k:A 424 128 0.3459 0.1085 0.3594 6.42e-14
26 5e4k:A 424 134 0.3308 0.1038 0.3284 3.46e-12
27 1tdq:B 126 129 0.3233 0.3413 0.3333 7.10e-13
28 5xts:A 460 129 0.3459 0.1000 0.3566 2.94e-12 5xtw:A, 5xtw:C, 5xtw:D, 5xtw:E, 5xtw:F, 5xtw:H
29 5xts:A 460 112 0.2707 0.0783 0.3214 4.95e-07 5xtw:A, 5xtw:C, 5xtw:D, 5xtw:E, 5xtw:F, 5xtw:H
30 4yli:D 155 116 0.2782 0.2387 0.3190 4.59e-12 4yli:A, 4yli:B, 4yli:C, 4yli:E, 4yli:F, 4ymd:A, 4ymd:B, 4ymd:D, 4ymd:F, 4ymd:C, 4ymd:E
31 3t3a:A 122 124 0.2857 0.3115 0.3065 5.55e-12 3t3a:B
32 8umo:K 113 122 0.2481 0.2920 0.2705 6.69e-12
33 5e4l:A 428 109 0.3083 0.0958 0.3761 8.89e-12
34 5e4l:A 428 129 0.3233 0.1005 0.3333 2.12e-11
35 3cdg:J 123 127 0.3008 0.3252 0.3150 9.15e-12 3cdg:E, 3cii:G, 3cii:I
36 4wqq:A 141 137 0.3158 0.2979 0.3066 1.04e-11 1wmy:A, 1wmy:B, 1wmz:A, 1wmz:B, 1wmz:C, 1wmz:D, 4wqq:B, 4wqq:C, 4wqq:D
37 5f2q:B 135 133 0.3008 0.2963 0.3008 1.39e-11 5f2q:A, 5f2q:C, 5f2q:D, 5f2q:E, 5f2q:F, 5f2q:G, 5f2q:H, 5f2q:I, 5f2q:J, 1jzn:A, 1jzn:B, 1jzn:C, 1jzn:D, 1jzn:E, 1muq:B, 1muq:A, 1muq:C, 1muq:D, 1muq:E
38 5e4l:B 386 129 0.3233 0.1114 0.3333 1.88e-11
39 5e4l:B 386 71 0.2256 0.0777 0.4225 6.75e-06
40 1qdd:A 144 131 0.2932 0.2708 0.2977 3.06e-11
41 8ea6:B 124 86 0.2180 0.2339 0.3372 3.76e-11 8ea5:A, 8ea5:B, 8ea6:A, 8ea7:A, 8ea7:B, 8ea8:B, 8ea8:A, 8ea9:B, 8ea9:A, 8eaa:B, 8eaa:A, 8eab:A, 8eab:B, 8se5:B, 8se5:A, 8se6:A, 8se6:B
42 6a7t:A 137 83 0.2030 0.1971 0.3253 2.43e-10 6m5m:A
43 2vuv:A 129 131 0.2632 0.2713 0.2672 3.05e-10 2vuz:A
44 1egg:B 144 143 0.3609 0.3333 0.3357 4.29e-10 1egg:A, 1egi:A, 1egi:B, 7jub:A, 7juc:A, 7jud:A, 7jud:B, 7jue:A, 7juf:A, 7juf:B, 7jug:A, 7juh:A, 7l61:A, 7l62:A, 7l63:A, 7l64:A, 7l65:A, 7l66:A, 7l67:A, 7l68:A, 7l68:B
45 3wsr:A 120 125 0.2256 0.2500 0.2400 5.76e-10 3wsr:B
46 2bpe:A 128 126 0.2707 0.2812 0.2857 1.52e-09 2bpe:B, 2bph:A, 2bph:B, 2cl8:A, 2cl8:B
47 6ryj:A 122 108 0.2556 0.2787 0.3148 1.94e-09 6ryg:A, 6rym:A, 6ryn:A
48 1kza:1 115 119 0.2782 0.3217 0.3109 2.20e-09 1kza:2, 1kzb:1, 1kzb:2, 1kzc:1, 1kzc:2, 1kzd:1, 1kzd:2, 1kze:1, 1kze:2, 1rdi:1, 1rdi:2, 1rdj:1, 1rdj:2, 1rdk:1, 1rdk:2, 1rdl:1, 1rdl:2, 1rdm:1, 1rdm:2, 1rdn:1, 1rdn:2, 1rdo:1, 1rdo:2
49 6a7s:B 138 97 0.2105 0.2029 0.2887 6.23e-09 6a7t:B, 6m5m:B
50 7odu:A 129 117 0.2632 0.2713 0.2991 8.16e-09
51 1fvu:B 121 91 0.2406 0.2645 0.3516 1.07e-08 1fvu:D
52 3j82:A 131 130 0.2707 0.2748 0.2769 2.22e-08
53 2ric:C 158 106 0.2556 0.2152 0.3208 2.90e-08 1b08:A, 1b08:B, 1b08:C, 3dbz:A, 3dbz:B, 3dbz:C, 4e52:B, 4e52:C, 4e52:A, 3g81:A, 3g81:B, 3g81:C, 3g83:A, 3g83:B, 3g83:C, 3g84:A, 3g84:B, 3g84:C, 2ggu:A, 2ggu:B, 2ggu:C, 2ggx:A, 2ggx:B, 2ggx:C, 3ikn:A, 3ikn:B, 3ikn:C, 3ikp:A, 3ikp:B, 3ikp:C, 3ikq:A, 3ikq:B, 3ikq:C, 3ikr:A, 3ikr:B, 3ikr:C, 4m17:A, 4m17:B, 4m17:C, 4m17:D, 4m17:E, 4m17:F, 4m17:G, 4m17:H, 4m17:I, 4m17:J, 4m17:K, 4m17:L, 4m18:A, 4m18:E, 4m18:B, 4m18:C, 4m18:D, 4m18:L, 4m18:F, 4m18:G, 4m18:H, 4m18:I, 4m18:J, 4m18:K, 2orj:A, 2orj:B, 2orj:C, 2ork:A, 2ork:B, 2ork:C, 2os9:A, 2os9:B, 2os9:C, 5oxr:B, 5oxr:C, 5oxr:A, 5oxs:A, 5oxs:B, 5oxs:C, 1pw9:A, 1pw9:B, 1pw9:C, 1pwb:A, 1pwb:B, 1pwb:C, 2ria:A, 2ria:B, 2ria:C, 2rib:A, 2rib:B, 2rib:C, 2ric:B, 2ric:A, 2rid:A, 2rid:B, 2rid:C, 2rie:A, 2rie:B, 2rie:C
54 3cfw:A 156 117 0.2556 0.2179 0.2906 4.27e-08 5vc1:A
55 1hup:A 141 117 0.2556 0.2411 0.2906 4.90e-08
56 4c16:A 280 121 0.2707 0.1286 0.2975 5.06e-08 4c16:B, 4csy:A, 4csy:B, 1esl:A, 6eyi:A, 6eyj:A, 6eyj:B, 6eyk:A, 1g1t:A
57 1bj3:B 123 132 0.2782 0.3008 0.2803 2.25e-07 1ixx:B, 1ixx:D, 1ixx:F, 1j34:B, 1j35:B, 1x2t:B, 1x2t:D
58 1iod:B 123 132 0.2857 0.3089 0.2879 3.38e-07 1wt9:B, 1y17:B
59 1g1q:A 160 117 0.2632 0.2188 0.2991 6.51e-07 1g1q:B, 1g1q:C, 1g1q:D, 1g1r:A, 1g1r:B, 1g1r:D, 1g1r:C, 1g1s:B, 1g1s:A
60 3vpp:B 122 128 0.2782 0.3033 0.2891 6.90e-07 3vpp:A
61 3alu:A 157 127 0.2481 0.2102 0.2598 8.26e-06 3als:A, 3als:B, 3als:C, 3als:D, 3alt:A, 3alt:B, 3alt:C, 3alt:D, 3alu:B, 3alu:C, 3alu:D
62 3pak:A 145 117 0.2105 0.1931 0.2393 1.08e-05 5ffr:A, 5ffs:A, 5fft:A, 3paq:A, 3par:A, 3pbf:A, 1r13:A, 1r14:A, 4wr9:A, 4wrc:A, 4wre:A, 4wrf:A, 4wuw:A, 4wux:A
63 1iod:A 129 89 0.2256 0.2326 0.3371 3.37e-05 1wt9:A, 1y17:A
64 1ukm:B 124 94 0.2180 0.2339 0.3085 9.90e-05
65 1bj3:A 129 89 0.2180 0.2248 0.3258 1.68e-04 1j34:A, 1j35:A, 1x2t:A, 1x2t:C
66 1htn:A 156 79 0.1429 0.1218 0.2405 4.34e-04 1tn3:A
67 2e3x:B 129 85 0.2105 0.2171 0.3294 6.20e-04
68 4mth:A 139 138 0.2632 0.2518 0.2536 0.008 1uv0:A
69 1ixx:A 129 89 0.2030 0.2093 0.3034 0.028 1ixx:C, 1ixx:E
70 6fu4:A 297 140 0.2632 0.1178 0.2500 0.19 6fu4:B, 6fu4:C, 6fu4:D
71 8b6l:A 425 49 0.0977 0.0306 0.2653 0.62
72 6ftg:x 426 49 0.0977 0.0305 0.2653 0.62 8btk:SX, 6fti:x, 6ftj:x, 3j7q:1, 3j7r:1, 3jc2:1, 8oj0:1, 8oj8:1, 6r7q:XX, 6w6l:1, 7zl3:A
73 3zl8:A 427 123 0.2030 0.0632 0.2195 0.62
74 2wwb:A 476 49 0.0977 0.0273 0.2653 0.63 8b5l:s, 8b6c:K, 4cg6:A, 8dnx:A, 8dny:A, 8dnz:A, 8do0:A, 8do1:A, 8do2:A, 8do3:A, 8rjb:1, 8rjc:1, 8rjd:1, 7tm3:1, 7tut:1
75 8bf9:C 385 50 0.0977 0.0338 0.2600 1.2 6z3t:A
76 6rtg:A 503 21 0.0677 0.0179 0.4286 2.1
77 6eqo:A 1804 39 0.0977 0.0072 0.3333 2.9 6eqo:B

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218