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BioLiP
>protein
LAEHLLKPLPADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGA
EWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLK
ALSKGQNVTEEECLEKIRLFLVNYTATIDVIYEMYTQMNAELNYKV

The query sequence (length=206) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4gxg:A 209 206 1.0000 0.9856 1.0000 5.80e-156 2bv7:A, 2euk:A, 2eum:A, 2evd:A, 2evl:A, 2evs:A, 2evs:E, 4gh0:A, 4ghp:A, 4ghs:A, 4ghs:B, 4gix:A, 4gjq:A, 4gjq:B, 4gvt:A, 4gxd:A, 4gxg:B, 4gxg:D, 4gxg:E, 4h2z:A, 3ric:A, 3rzn:A, 3s0i:A, 3s0k:A, 1sx6:A
2 5kdi:A 211 192 0.3495 0.3412 0.3750 7.18e-33 5kdi:B
3 4nti:A 202 167 0.2087 0.2129 0.2575 9.88e-09 4nt2:A, 4ntg:A, 4ntg:B, 4nti:B, 4nto:A, 4nto:B, 4nto:C
4 4kbr:B 207 144 0.1845 0.1836 0.2639 7.51e-07 4kbr:A, 4kbr:C, 4kbr:D, 4kbr:F, 4kbr:G, 4kbr:H
5 4k80:A 209 164 0.1796 0.1770 0.2256 6.68e-06 4k84:A, 4k84:B, 4k85:A, 4k85:B, 4k85:C, 4k85:D, 4k8n:A, 4k8n:E, 4k8n:B, 4k8n:C, 4k8n:D, 4k8n:F, 4kf6:A, 4kf6:B, 4kf6:C, 4kf6:D, 4kf6:E, 4kf6:F
6 8bja:A 1563 137 0.1602 0.0211 0.2409 0.35
7 8d4x:B 1669 136 0.1553 0.0192 0.2353 1.1 8c06:A, 8c06:D
8 8e0q:A 1689 136 0.1553 0.0189 0.2353 1.1 8d4x:A, 8e0q:B
9 6s83:A 400 47 0.0777 0.0400 0.3404 1.3 6s83:B, 6s83:C, 6s83:D, 6s83:E, 6s83:F, 6s83:G, 6s83:H
10 8ewi:A 1775 136 0.1553 0.0180 0.2353 1.4 8ewi:B, 8ewi:C, 8ewi:D
11 8p82:A 1596 142 0.1602 0.0207 0.2324 1.4 8p82:B
12 8bja:B 1638 145 0.1650 0.0208 0.2345 2.3
13 8q59:A 280 32 0.0583 0.0429 0.3750 2.7 8q57:A, 8q57:B, 8q59:B
14 5lqw:F 218 31 0.0534 0.0505 0.3548 4.0
15 6tmf:X 97 32 0.0583 0.1237 0.3750 8.6
16 6dbi:C 622 37 0.0437 0.0145 0.2432 8.8 6dbi:A, 6dbj:A, 6dbj:C, 6dbl:A, 6dbl:C, 6dbo:A, 6dbo:C, 6dbq:A, 6dbq:C, 6dbr:A, 6dbr:C, 6dbt:A, 6dbt:C, 6dbu:A, 6dbu:C, 6dbv:A, 6dbv:C, 6dbw:A, 6dbw:C, 6dbx:A, 6dbx:C, 3jbw:A, 3jbw:C, 3jbx:A, 3jbx:C, 3jby:A, 3jby:C
17 4a7x:C 234 65 0.0874 0.0769 0.2769 9.4 4a7w:A, 4a7w:B, 4a7x:B, 4a7x:D, 4a7x:E

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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