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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
LADSKAVLNQAVADLSVAHSILHQVHWYMRGRGFMIWHPKMDEYMEEIDGYLDEMSERLITLGGAPFSTLKEFSENSQLK
EVLGDYNVTIEEQLARVVEVFRYLAALFQKGFDVSDEEGDSVTNDIFNVAKASIEKHIWMLQAELGQAPKL

The query sequence (length=151) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2bw1:G 165 151 1.0000 0.9152 1.0000 2.97e-111 2bw1:C, 2bw1:D, 2bw1:A, 2bw1:B, 2bw1:H, 2bw1:E, 2bw1:F, 2bw1:K, 2bw1:L, 2bw1:I, 2bw1:J, 1umn:K, 2ux1:A, 2ux1:B, 2ux1:C, 2ux1:D, 2ux1:E, 2ux1:F, 2ux1:G, 2ux1:H, 2ux1:I, 2ux1:J, 2ux1:K, 2ux1:L, 2v15:A, 2v15:B, 2v15:C, 2v15:D, 2v15:E, 2v15:F, 2v15:G, 2v15:H, 2v15:I, 2v15:J, 2v15:K, 2v15:L, 2xjm:A, 2xjm:B, 2xjm:C, 2xjm:D, 2xjm:E, 2xjm:F, 2xjm:G, 2xjm:H, 2xjm:I, 2xjm:J, 2xjm:K, 2xjm:L, 2xjn:A, 2xjn:C, 2xjn:D, 2xjn:E, 2xjn:F, 2xjn:G, 2xjn:H, 2xjn:I, 2xjn:J, 2xjn:K, 2xjn:L, 2xkq:A, 2xkq:B, 2xkq:C, 2xkq:D, 2xkq:E, 2xkq:F, 2xkq:G, 2xkq:H, 2xkq:I, 2xkq:J, 2xkq:K, 2xkq:L
2 2wlu:A 166 148 0.6225 0.5663 0.6351 6.70e-69
3 6hx2:B 156 147 0.4371 0.4231 0.4490 1.33e-42 6hui:D, 6hui:A, 6hui:B, 6hui:C, 6hui:E, 6hui:F, 6hx2:A, 6hx2:C, 6hx2:D, 6hx2:E, 6hx2:F, 2iy4:B, 2iy4:C, 2iy4:D, 2iy4:E, 2iy4:G, 2iy4:F, 2iy4:H, 2iy4:I, 2iy4:J, 2iy4:K, 2iy4:L, 2iy4:M, 2iy4:O, 2iy4:N, 2iy4:P, 2iy4:Q, 2iy4:S, 2iy4:R, 2iy4:T, 2iy4:U, 2iy4:X, 2iy4:V, 2iy4:Y, 1qgh:E, 1qgh:G, 1qgh:A, 1qgh:C, 1qgh:I, 1qgh:K, 1qgh:F, 1qgh:H, 1qgh:J, 1qgh:L, 1qgh:B, 1qgh:D, 6sev:A, 6sev:B, 6sev:D, 6sev:E
4 1jig:A 146 137 0.3113 0.3219 0.3431 1.04e-25 1jig:B, 1jig:C, 1jig:D
5 1ji5:A 142 140 0.3179 0.3380 0.3429 4.23e-25 1ji5:B, 1ji5:C, 1ji5:D
6 1n1q:A 149 137 0.3179 0.3221 0.3504 5.85e-25 1n1q:B, 1n1q:C, 1n1q:D
7 2fjc:B 156 138 0.3179 0.3077 0.3478 4.49e-18 2fjc:A, 2fjc:D, 2fjc:C, 2fjc:E, 2fjc:H, 2fjc:F, 2fjc:G, 2fjc:I, 2fjc:L, 2fjc:J, 2fjc:K, 2fjc:M, 2fjc:N, 2fjc:O, 2fjc:P
8 2c2f:A 178 123 0.2715 0.2303 0.3333 5.62e-16 2c2u:A, 2f7n:A
9 1ji4:A 144 140 0.2781 0.2917 0.3000 1.22e-15 4evb:A, 4evc:A, 1ji4:D, 1ji4:B, 1ji4:C, 1ji4:E, 1ji4:H, 1ji4:F, 1ji4:G, 1ji4:I, 1ji4:L, 1ji4:J, 1ji4:K
10 3ge4:A 161 146 0.2914 0.2733 0.3014 7.75e-14 3ge4:B, 3ge4:C, 3ge4:D, 3ge4:E, 3ge4:F, 3ge4:G, 3ge4:H, 3ge4:I, 3ge4:J, 3ge4:K, 3ge4:L
11 5lbh:A 143 140 0.2583 0.2727 0.2786 1.06e-13 5lbh:J, 5lbh:B, 5lbh:C, 5lbh:D, 5lbh:G, 5lbh:E, 5lbh:F, 5lbh:L, 5lbh:H, 5lbh:I, 5lbh:K
12 4dyu:H 157 138 0.2318 0.2229 0.2536 3.99e-12 4dyu:A, 4dyu:B, 4dyu:C, 4dyu:D, 4dyu:E, 4dyu:F, 4dyu:I, 4dyu:J, 4dyu:K, 4dyu:L
13 7aqs:E 159 132 0.2384 0.2264 0.2727 1.31e-11 3ak9:A, 3ak9:C, 3ak9:B, 3ak9:D, 3ak9:E, 3ak9:G, 3ak9:F, 3ak9:H, 3ak9:I, 3ak9:K, 3ak9:J, 3ak9:L, 7aqs:A, 7aqs:C, 7aqs:B, 7aqs:D, 7aqs:G, 7aqs:F, 7aqs:H, 7aqs:I, 7aqs:K, 7aqs:J, 7aqs:L, 7aqs:M, 7aqs:O, 7aqs:N, 7aqs:P, 7aqs:Q, 7aqs:S, 7aqs:R, 7aqs:T, 7aqs:U, 7aqs:W, 7aqs:V, 7aqs:X, 1f30:A, 1f30:B, 1f30:E, 1f30:F, 1f30:G, 1f30:H, 1f30:I, 1f30:J
14 3kwo:A 149 131 0.2450 0.2483 0.2824 4.23e-10 3kwo:B, 3kwo:C, 3kwo:D
15 4a25:B 169 146 0.2318 0.2071 0.2397 2.04e-09 4a25:A, 4a25:C, 4a25:D
16 1vei:A 175 156 0.2914 0.2514 0.2821 2.80e-09 1uvh:A, 1uvh:B, 1uvh:C, 1uvh:D, 1veq:A, 1veq:J, 1veq:B, 1veq:C, 1veq:D, 1veq:E, 1veq:F, 1veq:L, 1veq:G, 1veq:H, 1veq:I, 1veq:K
17 2pyb:A 151 145 0.2384 0.2384 0.2483 6.64e-09 2pyb:B, 2pyb:C, 2pyb:D
18 4cyb:J 173 120 0.2119 0.1850 0.2667 1.72e-08 4cyb:A, 4cyb:B, 4cyb:C, 4cyb:D, 4cyb:E, 4cyb:F, 4cyb:G, 4cyb:H, 4cyb:I, 4cyb:K, 4cyb:L
19 2c2j:A 165 154 0.2384 0.2182 0.2338 1.51e-05 2c6r:A, 6tb5:A, 6tgt:A
20 2yjj:G 157 124 0.2252 0.2166 0.2742 1.36e-04 2yjj:A, 2yjj:B, 2yjj:C, 2yjj:I, 2yjj:D, 2yjj:J, 2yjj:E, 2yjj:F, 2yjj:H, 2yjj:K, 2yjj:L, 2yjk:A, 2yjk:B, 2yjk:C, 2yjk:I, 2yjk:D, 2yjk:J, 2yjk:E, 2yjk:F, 2yjk:G, 2yjk:H, 2yjk:K, 2yjk:L
21 6lkp:C 172 50 0.1060 0.0930 0.3200 0.002 6lkp:A, 6lkp:B, 6lkp:D, 6lkp:E, 6lkp:F
22 3r2l:A 154 115 0.1788 0.1753 0.2348 0.002 3r2m:A, 3r2r:A, 3r2s:A
23 4m33:A 161 125 0.2053 0.1925 0.2480 0.010 4m32:A, 4m32:B, 4m32:C, 4m32:D, 4m33:B, 4m33:C, 4m33:D, 4m34:A, 4m34:B, 4m34:C, 4m34:D, 4m35:A, 4m35:B, 4m35:C, 4m35:D, 5ww3:A, 5ww3:B, 5ww3:C, 5ww3:D, 5ww4:A, 5ww4:B, 5ww4:C, 5ww4:D, 5ww5:A, 5ww5:C, 5ww5:B, 5ww6:A, 5ww6:B, 5ww6:C, 5ww6:D, 5ww7:A, 5ww7:C, 5ww7:B, 5ww7:D, 5ww8:A, 5ww8:B, 5ww8:C, 5ww8:D, 5ww9:A, 5ww9:B, 5ww9:C, 5ww9:D, 2z90:A, 2z90:B, 2z90:C, 2z90:D
24 5hjh:D 178 50 0.0993 0.0843 0.3000 0.010 5hjh:A, 5hjh:B, 5hjh:C, 5i4j:A, 5i4j:B, 5i4j:C, 5i4j:D
25 8ffd:B 156 139 0.2185 0.2115 0.2374 0.018 8ffb:A, 8ffb:B, 8ffb:L, 8ffb:C, 8ffb:D, 8ffb:E, 8ffb:F, 8ffb:G, 8ffb:I, 8ffb:H, 8ffb:J, 8ffb:K, 8ffc:A, 8ffc:E, 8ffc:B, 8ffc:L, 8ffc:C, 8ffc:J, 8ffc:D, 8ffc:F, 8ffc:G, 8ffc:I, 8ffc:H, 8ffc:K, 8ffc:M, 8ffc:N, 8ffc:O, 8ffc:P, 8ffd:A, 8ffd:C, 8ffd:D, 8ffd:E, 8ffd:F, 8ffd:G, 8ffd:H, 8ffd:I, 8ffd:J, 8ffd:K, 8ffd:L, 8ffd:M, 8ffd:N, 8ffd:O, 8ffd:P
26 4u0v:A 243 60 0.1060 0.0658 0.2667 0.062 4u0v:B, 4u0w:A, 4u0w:B, 4u0y:A, 4u0y:B, 4u0y:C, 4u0y:D, 4wwc:B
27 2vxx:B 173 67 0.0927 0.0809 0.2090 0.53 2vxx:A, 2vxx:D, 2vxx:C
28 4am2:A 159 110 0.2185 0.2075 0.3000 0.54 4am2:B, 4am4:A, 4am4:B, 4am5:A, 4am5:B
29 7vf6:A 366 74 0.1258 0.0519 0.2568 1.4 7vf6:B
30 8pdc:A 122 45 0.1258 0.1557 0.4222 2.2
31 8w1e:B 172 142 0.2384 0.2093 0.2535 2.7 8w1d:A, 8w1e:A, 8w1e:C, 8w1e:D, 8w1e:E, 8w1e:F, 8w1e:G, 8w1e:H, 8w1e:I, 8w1e:J, 8w1e:K, 8w1e:L, 8w1f:A, 8w1f:B, 8w1f:C, 8w1f:D, 8w1f:E, 8w1f:F, 8w1f:G, 8w1f:H, 8w1f:I, 8w1f:J, 8w1f:K, 8w1f:L
32 3qz1:A 445 73 0.1325 0.0449 0.2740 3.4 3qz1:B, 3qz1:C, 3qz1:D
33 2a6o:A 152 18 0.0596 0.0592 0.5000 3.4 2a6o:B, 6fi8:A, 6fi8:B, 6fi8:G, 6fi8:H, 2vhg:A, 2vhg:B, 2vic:A, 2vic:B, 2vih:A, 2vih:B, 2vju:A, 2vju:B, 2vjv:A, 2vjv:B
34 7lgp:B 377 47 0.0861 0.0345 0.2766 3.7 7lgp:A
35 1moj:A 180 63 0.1325 0.1111 0.3175 4.7 1moj:B, 1moj:C, 1moj:D, 1tjo:A, 1tjo:B, 1tjo:C, 1tjo:D, 1tk6:A, 1tk6:B, 1tk6:C, 1tk6:D, 1tko:A, 1tko:B, 1tko:C, 1tko:D, 1tkp:A, 1tkp:B, 1tkp:D, 1tkp:C
36 8dmr:A 373 44 0.0993 0.0402 0.3409 5.8 8dmq:A, 8dms:B, 8ipj:A, 8ipw:A, 8ipw:B
37 3ffz:A 1246 92 0.1258 0.0152 0.2065 6.4 3d3x:A, 3d3x:B, 3ffz:B, 7ovw:AAA, 7ovw:BBB, 1t3a:A, 1t3a:B, 1t3c:A, 1t3c:B, 7uib:D, 7uib:A, 1zkw:A, 1zkw:B, 1zkx:A, 4zkt:A, 4zkt:C, 4zkt:E, 1zl6:A, 1zn3:A
38 7kzv:V 1155 86 0.1523 0.0199 0.2674 7.2 8a9k:B
39 6vaa:B 1153 86 0.1523 0.0199 0.2674 7.2
40 7k84:A 793 92 0.1258 0.0240 0.2065 7.3
41 2yc3:A 219 65 0.1325 0.0913 0.3077 8.0 5mrm:A, 5mro:A, 5mrp:A, 4nak:A, 4nal:A, 4nan:A, 1w77:A, 2yc5:A, 2ycm:A
42 4lqx:B 309 74 0.1060 0.0518 0.2162 8.5 4lqx:A
43 3wn6:A 404 32 0.0861 0.0322 0.4062 8.6 3wn6:B, 3wn6:C, 3wn6:D
44 8fth:A 1263 53 0.1126 0.0135 0.3208 9.0

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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