BioLiP

>protein
KTYQSRDLVLEPIQHPKSIELGMPEVDQSVLAEVAERENVIIGVRPVDEKSKSLIASKMYSSKGLFVKAKSSDWGPMSGF
IPVDQSFAKASARRDLEKFNEYAEQSILSGNAVSANLYLNQVRIEELVSKYESLTPLELDVDSGMYKTTATNGDQTIPFF
LNKVTVDDKELWQVHYLREGELAPFKVIGDPVSKQPMTADYDLLTVMYTYGDLGPQDKVKQPLTWEQWKESVTYEDLSPK
YKARYDNQALYEKQDGASLGMVSDRLKELKDVINTSLGRTDGLEMVHHGADDANPYAVMADNFPATFFVPKHFFDDDGLG
EGKGSIQTYFNVNEQGAVVIQNPQEFSNFQQVAINASYRASLNDKWNSGLDSPLFTTKRKLSHDYLDARDEVAKKL

The query sequence (length=396) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	8bo1:B	398	396	1.0000	0.9950	1.0000	0.0	8bo1:D, 8br0:B, 8br0:D, 8br1:B, 8br1:D
2	7p1g:M	347	300	0.2222	0.2536	0.2933	4.35e-30	7p1g:K, 7p1g:L, 7p1g:N, 7p1g:O
3	1sk6:A	481	289	0.2071	0.1705	0.2837	6.21e-14	1k90:B, 1pk0:B, 1s26:B
4	1sk6:B	454	291	0.2071	0.1806	0.2818	8.47e-14
5	1xfu:A	735	289	0.2071	0.1116	0.2837	1.18e-13	1k90:A, 1k90:C, 1lvc:A, 1lvc:C, 1pk0:A, 1pk0:C, 1s26:A, 1s26:C, 1sk6:C, 1xfu:B, 1xfu:C, 1xfu:D, 1xfu:E, 1xfu:F, 1xfv:A, 1xfv:B, 1xfv:C, 1xfv:D, 1xfv:E, 1xfv:F, 1xfw:A, 1xfw:B, 1xfw:C, 1xfw:D, 1xfw:E, 1xfw:F, 1xfx:A, 1xfx:B, 1xfx:C, 1xfx:D, 1xfx:E, 1xfx:F, 1xfy:A, 1xfy:B, 1xfy:C, 1xfy:D, 1xfy:E, 1xfy:F, 1xfz:A, 1xfz:B, 1xfz:C, 1xfz:D, 1xfz:E, 1xfz:F, 1y0v:A, 1y0v:B, 1y0v:C, 1y0v:D, 1y0v:E, 1y0v:F
6	1zot:A	351	303	0.1894	0.2137	0.2475	1.15e-12	2col:A
7	8jxc:A	1337	87	0.0581	0.0172	0.2644	0.95	2i1p:A, 8jxb:B, 8jxh:B, 8jxi:A
8	8em4:A	3818	87	0.0581	0.0060	0.2644	1.3	8em4:B
9	8em7:A	4378	87	0.0581	0.0053	0.2644	1.3	8em7:B, 8jut:A, 8jut:B, 8juu:B, 8juu:A, 8jx8:B, 8jx8:A, 8jx9:B, 8jxa:A, 8jxb:A, 8jxd:A, 8jxe:A, 8jxe:B, 8jxf:B, 8jxg:A, 8jxh:A, 8jxi:B
10	6b58:C	544	80	0.0581	0.0423	0.2875	3.6	6b58:A
11	5umh:B	310	69	0.0606	0.0774	0.3478	4.1	5umh:A
12	5vpn:E	585	80	0.0581	0.0393	0.2875	4.1	6awf:A, 2b76:A, 2b76:M, 1kf6:A, 1kf6:M, 1kfy:A, 1kfy:M, 4kx6:A, 4kx6:M, 1l0v:A, 1l0v:M, 3p4p:A, 3p4p:M, 3p4q:A, 3p4q:M, 3p4r:A, 3p4r:M, 3p4s:A, 3p4s:M, 5vpn:A
13	7a0r:C	197	53	0.0505	0.1015	0.3774	4.2	7a0s:C, 7a18:C, 3cf5:C, 3dll:C, 5dm6:C, 5dm7:C, 4io9:C, 4ioa:C, 4ioc:C, 1j5a:K, 5jvg:C, 5jvh:C, 1jzx:K, 1jzy:K, 1jzz:K, 1k01:K, 1nkw:C, 1nwx:C, 1nwy:C, 3pio:C, 3pip:C, 1sm1:C, 4u67:C, 4v49:BC, 4v4a:BC, 4v4g:BF, 4v4g:DF, 4v4g:FF, 4v4g:HF, 4v4g:JF, 4wfn:C, 1xbp:C, 2zjp:C, 2zjq:C, 2zjr:C
14	7ceb:A	553	81	0.0455	0.0325	0.2222	4.3	7cec:A
15	4jo3:H	227	36	0.0354	0.0617	0.3889	5.0	4jo1:H, 4jo1:I, 4jo3:I
16	6eri:BC	217	49	0.0404	0.0737	0.3265	6.9	5mmj:c, 5mmm:c, 4v61:AC, 5x8p:c, 5x8r:c

[Back]