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BioLiP
>protein
KRKRCGTCEPCRRLENCGACTSCTNRRTHQICKLRKCEVLKKKV

The query sequence (length=44) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 5exh:C 45 44 0.9318 0.9111 0.9318 1.96e-23 4z3c:C
2 5vc9:C 46 44 0.7500 0.7174 0.7500 3.30e-15 5vc9:F
3 4hp1:C 51 44 0.7273 0.6275 0.7273 5.92e-14 4hp3:C
4 6asd:C 45 44 0.7045 0.6889 0.7045 1.70e-13
5 5w9s:C 44 43 0.7045 0.7045 0.7209 6.67e-13
6 4wxx:B 1178 50 0.4318 0.0161 0.3800 8.87e-06 3epz:A, 3epz:B, 7lmk:A, 7lmk:B, 7lmk:C, 7lmk:D, 7lmm:A, 7lmm:B, 7lmm:C, 7lmm:D, 3pta:A, 7sfc:A, 7sfd:A, 7sfe:A, 7sff:A, 7sfg:A, 5wvo:C, 4wxx:A, 6x9i:A, 6x9j:A, 6x9k:A, 7xi9:A, 7xib:A, 5ydr:B, 4yoc:A
7 3swr:A 965 50 0.4318 0.0197 0.3800 2.37e-05
8 3pt6:B 915 50 0.4545 0.0219 0.4000 4.33e-05 4da4:A, 3pt6:A, 6w8v:A
9 2j2s:A 72 46 0.4091 0.2500 0.3913 8.87e-04 2jyi:A, 2kkf:A, 4nw3:A
10 3qmb:A 54 42 0.3864 0.3148 0.4048 0.001 3qmc:A, 3qmd:A, 3qmg:A, 3qmh:A, 3qmi:A
11 4pzi:A 61 45 0.3409 0.2459 0.3333 0.057
12 3av4:A 1140 27 0.2500 0.0096 0.4074 0.65 3av5:A, 3av6:A, 4da4:B, 5gut:A, 5guv:A, 3pt9:A, 6w8v:B, 6w8w:A, 6w8w:B, 5wy1:A
13 6v41:AAA 61 25 0.2500 0.1803 0.4400 1.4
14 6tg9:B 493 8 0.1591 0.0142 0.8750 2.1 6tg9:F, 6tga:B, 6tga:F
15 6tg9:B 493 29 0.2273 0.0203 0.3448 8.7 6tg9:F, 6tga:B, 6tga:F
16 6bml:B 294 35 0.2500 0.0374 0.3143 3.4 6bml:A, 6bmm:A, 6bmm:B, 6bmn:A, 6bmn:B, 7khm:A, 7khm:B
17 7p61:F 442 11 0.1591 0.0158 0.6364 3.6 7awt:F, 7nyr:F, 7nyu:F, 7nyv:F, 7nz1:F, 7p62:F, 7p63:F, 7p64:F, 7p69:F, 7p7c:F, 7p7e:F, 7p7j:F, 7p7k:F, 7p7l:F, 7p7m:F, 7z7r:F, 7z7s:F, 7z7t:F, 7z7v:F, 7z80:F, 7z83:F, 7z84:F, 7zc5:F, 7zci:F
18 7t2r:B 425 12 0.1591 0.0165 0.5833 4.0 7t2r:G, 7t30:B, 7t30:G
19 7arc:F 430 12 0.1591 0.0163 0.5833 4.2 7ard:F
20 4wrn:A 693 28 0.2727 0.0173 0.4286 4.6 7pfp:B
21 8gym:v1 442 12 0.1591 0.0158 0.5833 4.9 8b6f:AD, 8bqs:AD, 8gym:V1, 8gzu:v1, 8gzu:V1, 7tgh:V1
22 7v2c:A 433 12 0.1591 0.0162 0.5833 5.5 7ak5:F, 7ak6:F, 7b93:F, 8c2s:F, 8ca3:F, 8ca4:F, 8ca5:F, 7dgq:8, 7dgr:8, 7dgs:8, 7dgz:8, 7dh0:8, 7dkf:82, 6g2j:F, 6g72:F, 5gpn:c, 5gup:B, 8iao:F, 8iap:F, 8ib4:F, 8ib5:F, 8ib9:F, 8iba:F, 8ibd:F, 8ibe:F, 8ic2:F, 8ic3:F, 5lc5:F, 5ldw:F, 5ldx:F, 5lnk:1, 5o31:F, 8olt:F, 8om1:F, 7psa:F, 8pw5:1, 8pw6:1, 8pw7:1, 8q0a:F, 8q0f:F, 8q0j:F, 8q0m:F, 8q0o:F, 8q0q:F, 8q1p:F, 8q1u:F, 8q1y:F, 8q25:F, 8q45:F, 8q46:F, 8q47:F, 8q48:F, 8q49:F, 8q4a:F, 6q9d:V1, 6qa9:V1, 6qbx:V1, 6qc2:V1, 6qc3:V1, 6qc4:V1, 6qc5:V1, 6qc6:V1, 6qc7:V1, 6qc8:V1, 6qc9:V1, 6qca:V1, 6qcf:V1, 7qsd:F, 7qsk:F, 7qsl:F, 7qsm:F, 7qsn:F, 7qso:F, 7r41:F, 7r42:F, 7r43:F, 7r44:F, 7r45:F, 7r46:F, 7r47:F, 7r48:F, 7r4c:F, 7r4d:F, 7r4f:F, 7r4g:F, 8rgp:1, 8rgq:1, 8rgr:1, 8rgt:1, 8ud1:1F, 8ueo:1F, 8uep:1F, 8ueq:1F, 8uer:1F, 8ues:1F, 8uet:1F, 8ueu:1F, 8uev:1F, 8uew:1F, 8uex:1F, 8uey:1F, 8uez:1F, 8ugh:1F, 8ugi:1F, 8ugj:1F, 8ugn:1F, 8ugn:5F, 8ugr:1F, 8ugr:5F, 7v2d:A, 7v2e:A, 7v2f:A, 7v2h:A, 7v2k:A, 7v2r:A, 7v30:A, 7v31:A, 7v32:A, 7v33:A, 7v3m:A, 7vb7:A, 7vbn:A, 7vbz:A, 7vwj:A, 7vxp:A, 7vxu:A, 7vy8:A, 7vya:A, 7vyf:A, 7vyh:A, 7vyn:A, 7vz1:A, 7vzv:A, 7vzw:A, 7w00:A, 7w0h:A, 7w0r:A, 7w0y:A, 7w1o:A, 7w1p:A, 7w1t:A, 7w1u:A, 7w1v:A, 7w1z:A, 7w20:A, 7w2k:A, 7w2l:A, 7w2r:A, 7w2u:A, 7w2y:A, 7w31:A, 7w32:A, 7w35:A, 7w4c:A, 7w4d:A, 7w4e:A, 7w4f:A, 7w4g:A, 7w4j:A, 7w4k:A, 7w4l:A, 7w4m:A, 7w4n:A, 7w4q:A, 5xtb:A, 5xtd:A, 5xth:A, 5xti:A, 5xti:BA, 7zd6:1, 7zdh:1, 7zdj:1, 7zdm:1, 7zdp:1, 7zeb:1, 6zk9:1, 6zkc:1, 6zkd:1, 6zke:1, 6zkf:1, 6zkg:1, 6zkh:1, 6zki:1, 6zkj:1, 6zkk:1, 6zkl:1, 6zkm:1, 6zkn:1, 6zko:1, 6zkp:1, 6zkq:1, 6zkr:1, 6zks:1, 6zkt:1, 6zku:1, 6zkv:1, 6zr2:F, 6ztq:F
23 7b0n:F 460 12 0.1591 0.0152 0.5833 5.5 6gcs:B, 7o6y:B, 7o71:B, 6rfq:B, 6rfr:B, 6rfs:B, 6y79:B, 6yj4:F
24 4oh1:A 351 23 0.2273 0.0285 0.4348 5.8
25 8qby:F 421 12 0.1591 0.0166 0.5833 5.9
26 5fi3:A 344 12 0.1591 0.0203 0.5833 6.0 5fi3:B, 5fi5:A, 5fi5:B
27 7aqr:F 434 12 0.1591 0.0161 0.5833 6.3 7a23:A, 7a24:A, 7ar7:F, 7ar8:F, 7arb:F, 8bed:F, 8bpx:F, 8bq5:F, 8bq6:F, 8e73:V1, 6x89:V1
28 8b9z:F 441 12 0.1591 0.0159 0.5833 6.3 8ba0:F, 8esw:V1, 8esz:V1
29 5w9q:A 56 48 0.3182 0.2500 0.2917 7.7 5w9q:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218