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BioLiP
>protein
KRAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQV

The query sequence (length=76) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5eyo:C 88 76 1.0000 0.8636 1.0000 4.59e-51 1an2:A, 5eyo:A, 1hlo:B, 1nkp:B, 1nkp:E, 1nlw:B, 1nlw:E
2 1hlo:A 80 69 0.9079 0.8625 1.0000 5.07e-46
3 5i50:B 96 70 0.4211 0.3333 0.4571 7.52e-14 5i50:A, 1nkp:A, 1nkp:D
4 8ia3:E 111 97 0.4211 0.2883 0.3299 3.17e-09 8ia3:A, 8ia3:B, 8ia3:F
5 1an4:A 65 60 0.3289 0.3846 0.4167 1.63e-08 1an4:B
6 8osb:B 66 51 0.2237 0.2576 0.3333 1.12e-05
7 1am9:C 82 61 0.2632 0.2439 0.3279 2.05e-05 1am9:D, 1am9:A, 1am9:B
8 8ow1:B 116 70 0.3158 0.2069 0.3429 1.24e-04 8ovw:A, 8ovw:B, 8ow0:A, 8ow0:B, 8ow1:A, 7ssa:L, 7ssa:K
9 8hov:A 87 74 0.2895 0.2529 0.2973 2.99e-04 8hov:C, 8hov:B, 8hov:D, 8hov:E, 8hov:F
10 7f2f:B 94 79 0.2632 0.2128 0.2532 8.68e-04 7f2f:A
11 5gnj:B 77 51 0.2237 0.2208 0.3333 0.004 5gnj:G, 5gnj:I, 5gnj:A, 5gnj:E, 5gnj:F, 5gnj:M, 5gnj:N
12 1nlw:A 79 78 0.3158 0.3038 0.3077 0.012 1nlw:D
13 7xi3:A 287 55 0.2368 0.0627 0.3273 0.048
14 4a15:A 596 57 0.1711 0.0218 0.2281 0.067 5h8w:A, 2vsf:A
15 7d8t:A 199 55 0.2105 0.0804 0.2909 0.21 4ati:A, 4ati:B, 4atk:A, 4atk:B, 7d8t:B, 6g1l:A, 8vu0:A, 8vu0:B
16 7xq5:A 75 62 0.2368 0.2400 0.2903 0.26
17 1mdy:A 68 43 0.1579 0.1765 0.2791 0.26 1mdy:B, 1mdy:C, 1mdy:D
18 4zpr:A 235 48 0.1842 0.0596 0.2917 0.34
19 7xi4:A 283 53 0.2105 0.0565 0.3019 0.38 8g4a:A, 8g4a:B, 5nj8:B, 5sy7:A, 5v0l:A, 7xhv:A, 4zph:A, 4zpk:A
20 6vrb:A 1031 27 0.1711 0.0126 0.4815 0.88
21 6vrc:A 1007 27 0.1711 0.0129 0.4815 0.89
22 7aor:al 292 23 0.1447 0.0377 0.4783 1.6 6hiv:DL, 6hiw:DL
23 5nj8:D 134 53 0.1974 0.1119 0.2830 1.8
24 1a0a:A 63 62 0.1974 0.2381 0.2419 1.8 1a0a:B
25 8osk:M 316 67 0.2237 0.0538 0.2537 3.1 4h10:B, 8osl:M, 8osl:O
26 7z5i:A 56 43 0.1316 0.1786 0.2326 3.5 7z5i:B, 7z5k:A, 7z5k:B
27 3afv:A 439 37 0.1447 0.0251 0.2973 4.0 2d3q:A, 2d3q:B, 3mm1:A, 3mm2:A, 3mm3:A, 3vxi:A, 3vxj:A
28 8i0p:K 312 92 0.3289 0.0801 0.2717 5.0
29 5x7g:A 700 33 0.1316 0.0143 0.3030 7.1 5x7h:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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