Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
KPNIILIVADDLGYADVGFNGSKDIITPNIDDLAKSGTSFSDAYVAHPFCGPSRAALMTGRYPHKIGSQFNLPTRGSNVG
VPTDAKFISKLLNENNYFTGALGKWHMGDTPQHHPNKRGFDEYYGFLGGGHNYFPDQYQPQYKKQKAQGLKNIFEYITPL
EHNGKEVKETQYITDALSREAVNFVDKAVNKKHPFFLYLAYNAPHTPLQAKDEDMAMFPNIKNKDRKTYAGMVYAVDRGV
GKLVEALKKNNQYDNTLIVFMSDNGGKLSKGANNFPLKAGKGSTQEGGFRVPMLFHWPKHVPAGKRFSHPVSALDLYPTF
AALAGAKVEENQHLDGTNMWPAFIKNENPHKDEPIYALRHRKGYSDAAIRMNQWKALKVNQQPWQLFNIENDISEKHDVS
KSNKALLTDMVREMEKWSWDNQQPSWFHETTEGVNWRLDAMPRFDKTFKTT

The query sequence (length=451) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6b0j:A 452 451 0.9978 0.9956 0.9978 0.0 6b0j:B, 6b0j:C, 6b0k:A, 6b0k:B, 6b0k:C, 6b1v:A, 6b1v:B, 6b1v:C, 6bia:A, 6bia:B, 6bia:C
2 6psm:C 448 442 0.3925 0.3951 0.4005 1.01e-103 6prm:A, 6prm:B, 6prm:C, 6prm:D, 6psm:A, 6psm:B, 6psm:D, 6psm:E, 6psm:F, 6pso:B, 6pso:A
3 4fdi:A 494 423 0.3038 0.2773 0.3239 7.92e-61 4fdi:B, 4fdj:A, 4fdj:B
4 6ust:C 464 471 0.3038 0.2953 0.2909 1.48e-60 6ust:A, 6ust:B, 6ust:D
5 1fsu:A 475 457 0.3149 0.2989 0.3107 4.26e-60
6 7stt:A 445 455 0.3126 0.3169 0.3099 1.27e-57 7stu:A, 7stv:A
7 7ana:AAA 475 477 0.3193 0.3032 0.3019 3.20e-54 7ana:BBB, 7anb:AAA, 7anb:BBB
8 7an1:AAA 483 464 0.3016 0.2816 0.2931 7.93e-51 7oqd:AAA
9 1n2l:A 483 391 0.2882 0.2692 0.3325 2.07e-49 1auk:A, 1e1z:P, 1e2s:P, 1e33:P, 1e3c:P, 1n2k:A
10 7oza:CCC 488 482 0.3215 0.2971 0.3008 9.91e-47 7oza:AAA
11 6uss:A 485 468 0.2905 0.2701 0.2799 9.51e-44 6uss:B
12 7all:AAA 498 526 0.3370 0.3052 0.2890 1.53e-43
13 7oz9:BBB 483 468 0.2838 0.2650 0.2735 9.91e-43 7oz9:AAA
14 7aj0:A 501 440 0.2860 0.2575 0.2932 2.06e-40 7aj0:B, 7aj0:C, 7aj0:D, 7aj0:E, 7aj0:F
15 4cys:A 534 535 0.2971 0.2509 0.2505 2.68e-40 5aj9:A, 5aj9:B, 4cxk:A, 4cxk:B, 4cxs:A, 4cxs:B, 4cxu:A, 4cxu:B, 4cyr:A, 4cyr:B, 4cys:B, 1hdh:A, 1hdh:B
16 7ozc:AAA 485 485 0.3038 0.2825 0.2825 1.23e-35
17 6hr5:A 376 401 0.2550 0.3059 0.2868 4.68e-32
18 6s20:C 480 488 0.2727 0.2562 0.2520 4.71e-32
19 7oze:AAA 487 491 0.2616 0.2423 0.2403 2.88e-31 7oze:EEE, 7oze:FFF, 7oze:GGG
20 7p26:AAA 484 486 0.2639 0.2459 0.2449 1.14e-30
21 9fvt:A 519 438 0.2616 0.2274 0.2694 1.66e-29 9fvt:B, 9fvt:C, 9fvt:D
22 8di0:B 426 375 0.2173 0.2300 0.2613 2.45e-26
23 7oz8:AAA 474 472 0.2816 0.2679 0.2691 4.74e-25
24 8eg3:A 554 137 0.1330 0.1083 0.4380 6.01e-25 1p49:A
25 8eg3:A 554 177 0.1286 0.1047 0.3277 5.06e-21 1p49:A
26 7pth:A 517 477 0.2639 0.2302 0.2495 2.09e-24 6fny:A, 6fny:B, 6fny:C, 6fny:D, 6fny:E, 6fny:F, 6fny:G, 6fny:H, 6g5z:A, 6g5z:B, 6g5z:C, 6g5z:D, 6g60:A, 6g60:B, 6g60:C, 6g60:D, 7pth:B, 7pth:C, 7pth:D, 7ptj:A, 7ptj:B, 7ptj:C, 7ptj:D
27 6j66:B 476 480 0.2483 0.2353 0.2333 4.41e-24 6j66:A
28 6hhm:A 459 381 0.2350 0.2309 0.2782 1.59e-23
29 7ebp:A 526 210 0.1463 0.1255 0.3143 7.03e-21 7ebp:B, 7ebq:A
30 7ebp:A 526 179 0.1020 0.0875 0.2570 1.01e-11 7ebp:B, 7ebq:A
31 5g2v:A 494 220 0.1441 0.1316 0.2955 1.11e-20
32 5g2v:A 494 170 0.1020 0.0931 0.2706 6.60e-09
33 6s21:A 486 386 0.2129 0.1975 0.2487 2.25e-20 6s21:B, 6s21:C
34 6pt4:B 473 473 0.2506 0.2389 0.2389 1.03e-18 6pt4:A, 6pt6:B, 6pt6:A, 6pt9:A, 6pt9:B, 6ptk:A, 6ptk:B, 6ptk:C, 6ptk:D
35 7sno:A 506 398 0.2084 0.1858 0.2362 1.37e-18
36 7lj2:A 507 399 0.2195 0.1953 0.2481 1.20e-17 7lha:A, 7lha:B, 7lj2:B
37 4uph:A 504 412 0.2239 0.2004 0.2451 1.42e-17 4uph:B, 4uph:C, 4uph:D
38 4upi:A 548 505 0.2506 0.2062 0.2238 1.93e-17
39 4upl:A 555 531 0.2550 0.2072 0.2166 7.60e-16 4upl:C
40 7p24:AAA 494 218 0.1197 0.1093 0.2477 5.70e-15
41 7p24:AAA 494 201 0.1220 0.1113 0.2736 4.85e-11
42 5fql:A 507 399 0.1996 0.1775 0.2256 7.36e-15 6ioz:A
43 2vqr:A 512 530 0.2639 0.2324 0.2245 1.55e-13
44 3b5q:B 467 106 0.0843 0.0814 0.3585 7.08e-11 3b5q:A, 5g2t:A, 5g2t:B, 5g2t:C, 5g2t:D, 5g2u:A
45 3b5q:B 467 121 0.0710 0.0685 0.2645 0.61 3b5q:A, 5g2t:A, 5g2t:B, 5g2t:C, 5g2t:D, 5g2u:A
46 4miv:A 484 403 0.2195 0.2045 0.2457 4.63e-10 4mhx:A, 4mhx:B, 4miv:B, 4miv:C, 4miv:D, 4miv:E, 4miv:F, 4miv:G, 4miv:H
47 2w8s:B 513 424 0.2195 0.1930 0.2335 5.04e-09 2w8s:A, 2w8s:C, 2w8s:D
48 6v8q:A 569 72 0.0443 0.0351 0.2778 4.38e-04 6v8q:B, 6vat:A, 6vat:B, 6vat:C, 6vc7:A, 6vc7:B, 6vc7:C, 6vc7:D, 6vc7:E, 6vc7:F, 6vdf:A, 6vdf:C, 6vdf:D
49 6xlp:A 586 63 0.0377 0.0290 0.2698 0.024
50 4uor:A 418 119 0.0643 0.0694 0.2437 0.067 4uoo:A, 4uoo:B, 4uoo:C, 4uoo:D, 4uoo:E, 4uor:B, 4uor:C, 4uor:D, 4uor:E, 4uor:F, 4uor:G, 4uor:H, 4uor:I, 4uor:J, 4uor:K
51 2w5q:A 424 153 0.0843 0.0896 0.2484 1.8 2w5r:A, 2w5s:A, 2w5t:A
52 5tcd:A 388 34 0.0310 0.0361 0.4118 2.5 5udy:A
53 2mjp:A 184 74 0.0510 0.1250 0.3108 2.7
54 3en8:A 128 74 0.0532 0.1875 0.3243 2.8
55 4dpv:Z 559 69 0.0488 0.0394 0.3188 3.4 1c8d:A, 1c8f:A, 1c8g:A, 1ijs:P, 1p5w:A, 4qyk:K, 4qyk:V, 4qyk:E, 4qyk:J, 4qyk:S, 4qyk:B, 4qyk:c, 4qyk:W, 4qyk:H, 4qyk:I, 4qyk:T, 4qyk:L, 4qyk:M, 4qyk:C, 4qyk:R, 4qyk:A, 4qyk:b, 4qyk:Y, 4qyk:d, 4qyk:F
56 4rsl:A 436 83 0.0554 0.0573 0.3012 3.9 6iwe:A
57 5b43:A 1272 56 0.0399 0.0142 0.3214 5.5
58 7old:C 813 52 0.0333 0.0185 0.2885 7.4

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218