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BioLiP
>protein
KNKVVVVTGVPGVGGTTLTQKTIEKLKEEGIEYKMVNFGTVMFEVAKEEGLVEDRDQMRKLDPDTQKRIQKLAGRKIAEM
AKESNVIVDTHSTVKTPKGYLAGLPIWVLEELNPDIIVIVETSSDEILMRRLGDATRNRDIELTSDIDEHQFMNRCAAMA
YGVLTGATVKIIKNRDGLLDKAVEELISVLK

The query sequence (length=191) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6pjw:A 191 191 1.0000 1.0000 1.0000 5.21e-139 6pjw:B, 6pjw:C, 6pjw:D, 6pjw:E, 6pjw:F, 6pjw:G, 6pjw:H, 6pjw:I, 6pjw:J, 6pjw:K, 6pjw:L, 6psp:A, 6psp:B, 6psp:C, 6psp:D, 6psp:E, 6psp:F
2 6hf7:A 191 191 0.8168 0.8168 0.8168 4.42e-103 6hf7:B
3 1kht:B 191 191 0.7435 0.7435 0.7435 9.45e-98 1kht:C
4 3h86:B 191 172 0.6754 0.6754 0.7500 8.27e-97 3h86:A, 3h86:C, 3h86:G
5 1nks:C 194 193 0.4293 0.4227 0.4249 2.06e-43 1nks:D, 1nks:F
6 7owj:F 197 173 0.3246 0.3147 0.3584 9.72e-26 7owe:E, 7owe:F, 7owe:D, 7owe:A, 7owe:B, 7owe:C, 7owj:A, 7owj:B, 7owj:C, 7owj:D, 7owj:E, 7owk:B, 7owk:A, 7owk:C, 7owk:D, 7owk:E, 7owk:F, 7owl:A, 7owl:B, 7owl:C, 7owl:D, 7owl:E, 7owl:F
7 6ln3:A 202 135 0.3089 0.2921 0.4370 4.18e-23
8 4cw7:A 181 94 0.1518 0.1602 0.3085 0.042 4cvn:A, 4cvn:B, 4cvn:C, 4cvn:D, 4cw7:C, 4cw7:E, 4cw7:G
9 3iij:A 175 97 0.1414 0.1543 0.2784 0.053 3iik:A, 3iil:A, 3iim:A, 5jzv:A
10 4edh:B 209 135 0.1885 0.1722 0.2667 0.13 4e5u:A, 4e5u:B, 4edh:A, 4gmd:A, 4gmd:B, 4gmd:C, 4gmd:D, 3uwk:A, 3uwk:B, 3uwo:A, 3uwo:B, 3uxm:A, 3uxm:B, 3uxm:C, 3uxm:D
11 1y63:A 168 128 0.1518 0.1726 0.2266 0.81
12 8ink:W 388 119 0.1518 0.0747 0.2437 2.0 8fl2:NJ, 8fl3:NJ, 8fl4:NJ, 8ipx:W, 8ipy:W
13 3lv8:A 204 31 0.0576 0.0539 0.3548 2.4
14 2axn:A 451 45 0.0733 0.0310 0.3111 2.5 5ajv:B, 5ajw:A, 5ajx:A, 5ajy:A, 5ajz:A, 5ak0:A, 4d4j:A, 4d4k:A, 4d4l:A, 4d4m:A, 2dwo:A, 2dwp:A, 6etj:A, 6hvh:A, 6hvi:A, 6hvj:A, 2i1v:B, 6ibx:A, 6iby:A, 6ibz:A, 6ic0:A, 4ma4:A, 3qpu:A, 3qpv:A, 3qpw:A
15 7tm7:A 802 32 0.0785 0.0187 0.4688 3.1 7tm7:B
16 2o1s:B 493 80 0.1414 0.0548 0.3375 3.1 2o1s:D
17 5cb8:B 176 53 0.0890 0.0966 0.3208 3.1 5cb6:A, 5cb6:B, 5cb6:C, 5cb6:D, 5cb6:E, 5cb6:F, 5cb8:A
18 3add:A 251 132 0.1571 0.1195 0.2273 3.3 3a4l:A, 3a4l:B, 3a4m:A, 3a4m:B, 3adb:A, 3adb:B, 3adc:A, 3adc:B, 3add:B, 3am1:A
19 7zel:A 827 27 0.0576 0.0133 0.4074 3.5 7zel:B, 7zep:B, 7zes:A, 7zes:B
20 2bwj:B 195 140 0.1832 0.1795 0.2500 3.8
21 1ta9:B 394 137 0.1728 0.0838 0.2409 3.9 1ta9:A
22 6hg8:B 482 80 0.1309 0.0519 0.3125 4.6 2f5z:A, 2f5z:B, 2f5z:C, 2f5z:D, 2f5z:E, 2f5z:F, 2f5z:G, 2f5z:H, 2f5z:I, 2f5z:J, 6hg8:A, 6i4p:A, 6i4p:B, 6i4q:A, 6i4q:B, 6i4r:A, 6i4r:B, 6i4s:A, 6i4s:B, 6i4t:A, 6i4t:B, 6i4u:A, 6i4u:B, 6i4z:A, 6i4z:B, 6i4z:C, 6i4z:D, 6i4z:E, 6i4z:F, 6i4z:G, 6i4z:H, 5j5z:A, 5j5z:B, 5nhg:A, 5nhg:B, 5nhg:C, 5nhg:D, 5nhg:E, 5nhg:F, 5nhg:G, 5nhg:H, 7psc:A, 7psc:B, 3rnm:A, 3rnm:B, 3rnm:C, 3rnm:D, 1zmc:A, 1zmc:B, 1zmc:C, 1zmc:D, 1zmc:E, 1zmc:F, 1zmc:G, 1zmc:H, 1zmd:A, 1zmd:B, 1zmd:C, 1zmd:D, 1zmd:E, 1zmd:F, 1zmd:G, 1zmd:H, 1zy8:A, 1zy8:B, 1zy8:C, 1zy8:D, 1zy8:E, 1zy8:F, 1zy8:G, 1zy8:H, 1zy8:I, 1zy8:J, 7zyt:A, 7zyt:B
23 2o1s:A 536 80 0.1414 0.0504 0.3375 4.8 2o1s:C
24 1t71:A 281 110 0.1571 0.1068 0.2727 5.0
25 5oql:Z 639 27 0.0576 0.0172 0.4074 5.1
26 5vqa:A 368 115 0.1518 0.0788 0.2522 5.2 5wc2:A
27 3pih:A 836 23 0.0628 0.0144 0.5217 5.3
28 6rxt:CI 822 27 0.0576 0.0134 0.4074 5.6 6rxu:CI, 6rxv:CI, 6rxx:CI, 6rxy:CI, 6rxz:CI
29 8bv0:A 342 34 0.0733 0.0409 0.4118 5.7 8bv0:C
30 6n9l:A 625 23 0.0628 0.0192 0.5217 5.8
31 6f0x:B 398 25 0.0576 0.0276 0.4400 5.9 6f0x:A, 6f0x:C, 6f0x:D, 6f0x:E, 7l9p:A, 7l9p:B, 7l9p:C, 7l9p:D, 7l9p:E
32 6s2p:N 252 32 0.0733 0.0556 0.4375 6.2
33 6cy5:B 318 32 0.0733 0.0440 0.4375 6.3 6cy5:A
34 8xuq:A 885 31 0.0785 0.0169 0.4839 7.2 8xuo:A, 8xuo:G, 8xuq:E, 8xuq:F, 8xuq:G, 8xuv:A, 8xuv:B, 8xuv:C, 8xuv:D, 8xuv:E, 8xuv:F, 8xuv:G, 8xuv:H, 8xuv:I, 8xuv:J, 8xuv:K, 8xuv:L
35 5bud:A 391 78 0.0995 0.0486 0.2436 9.0 5bud:B
36 7x2q:A 467 66 0.0995 0.0407 0.2879 9.6 7x2q:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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