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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
KLKVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTGGVKQASHLLKYDSTLGIFDADVKPSGETAISVDGKIIQVVSNR
NPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKKVIITAPGKGDIPTYVVGVNADAYSHDEPIISNASCTTNCLAP
FVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNV
SVVDLVVQVSKKTFAEEVNAAFRDSAEKELKGILDVCDEPLVSVDFRCSDFSTTIDSSLTMVMGDDMVKVIAWYDNEWGY
SQRVVDLADIVANNW

The query sequence (length=335) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3k2b:A 337 335 1.0000 0.9941 1.0000 0.0 3k2b:B, 3k2b:C, 3k2b:D, 3k2b:E, 3k2b:F, 3k2b:G, 3k2b:H, 3k2b:O, 3k2b:Q, 6kez:A, 6kez:B, 6kez:C, 6kez:D, 6kez:E, 6kez:F, 6kez:G, 6kez:H, 3qv1:A, 3qv1:D, 3qv1:B, 3qv1:C, 3qv1:F, 3qv1:E, 3rvd:A, 3rvd:D, 3rvd:B, 3rvd:C, 3rvd:O, 3rvd:Q, 3rvd:F, 3rvd:G, 3rvd:E, 3rvd:H
2 1nbo:O 337 335 0.8836 0.8783 0.8836 0.0 1jn0:O, 1jn0:A, 1jn0:B, 1nbo:A, 1nbo:B, 2pkq:P, 2pkq:R, 2pkq:S, 2pkr:O, 2pkr:R, 2pkr:P, 2pkr:Q, 2pkr:A, 2pkr:B, 2pkr:C, 2pkr:D, 2pkr:H, 2pkr:I, 2pkr:L, 2pkr:M, 7q53:P, 7q53:R, 7q54:R, 7q54:P, 7q54:B, 7q54:D, 7q55:P, 7q55:R, 7q55:B, 7q55:D, 7q55:F, 7q55:H, 7q55:J, 7q55:L, 7q56:J, 7q56:L, 7q56:B, 7q56:D, 7q56:R, 7q56:P, 7q56:H, 7q56:F, 7q57:P, 7q57:R, 7q57:B, 7q57:D, 7q57:H, 7q57:F, 7q57:J, 7q57:L, 7q57:N, 7q57:T, 1rm3:O, 1rm3:A, 1rm3:B, 1rm4:O, 1rm4:A, 1rm4:B, 1rm5:O, 1rm5:A, 1rm5:B
3 7q54:C 368 338 0.8209 0.7473 0.8136 0.0 2pkq:O, 2pkq:Q, 2pkq:T, 7q53:O, 7q53:Q, 7q54:Q, 7q54:O, 7q54:A, 7q55:O, 7q55:Q, 7q55:A, 7q55:C, 7q55:E, 7q55:G, 7q55:I, 7q55:K, 7q56:K, 7q56:E, 7q56:I, 7q56:A, 7q56:G, 7q56:C, 7q56:Q, 7q56:O, 7q57:O, 7q57:Q, 7q57:A, 7q57:C, 7q57:G, 7q57:E, 7q57:I, 7q57:K, 7q57:M, 7q57:S
4 7zq3:R 348 336 0.7881 0.7586 0.7857 0.0 7zq3:O, 7zq4:O, 7zq4:R, 7zqk:O, 7zqk:R
5 6ghr:B 342 336 0.6567 0.6433 0.6548 1.45e-153 4boy:A, 4boy:B, 6gfo:A, 6gfo:B, 6gfo:C, 6gfo:D, 6gfp:A, 6gfp:B, 6gfq:B, 6gfq:A, 6gfr:A, 6gfr:B, 6gg7:B, 6gg7:A, 6ghl:A, 6ghl:D, 6ghl:B, 6ghl:C, 6ghr:D, 6ghr:A, 6ghr:C, 6gve:D, 6gve:A, 6gve:E, 6gve:F, 6gve:I, 6gve:K, 6gve:N, 6gve:O, 3zcx:A, 3zcx:B, 3zdf:B, 3zdf:A
6 3b1j:A 338 336 0.6776 0.6716 0.6756 5.19e-152 3b1j:B, 3b1k:A, 3b1k:H, 3b1k:B, 3b1k:G, 3b20:A, 3b20:B, 3b20:O, 3b20:P, 3b20:Q, 3b20:R, 2d2i:A, 2d2i:B, 2d2i:O, 2d2i:P, 2d2i:Q, 2d2i:R, 2duu:A, 2duu:B, 2duu:O, 2duu:P, 2duu:Q, 2duu:R
7 3cmc:O 334 333 0.5910 0.5928 0.5946 9.99e-136 3cmc:P, 3cmc:Q, 3cmc:R, 1dbv:O, 1dbv:P, 1dbv:Q, 1dbv:R, 2dbv:O, 2dbv:P, 2dbv:Q, 2dbv:R, 3dbv:O, 3dbv:P, 3dbv:Q, 3dbv:R, 4dbv:O, 4dbv:P, 4dbv:Q, 4dbv:R, 1gd1:O, 1gd1:P, 1gd1:Q, 1gd1:R, 1npt:O, 1npt:P, 1npt:Q, 1npt:R, 1nq5:O, 1nq5:Q, 1nq5:A, 1nq5:C, 1nqa:O, 1nqa:P, 1nqa:Q, 1nqa:R, 1nqo:O, 1nqo:Q, 1nqo:A, 1nqo:C
8 1hdg:O 332 329 0.5493 0.5542 0.5593 7.46e-127 1hdg:Q
9 2ep7:B 339 335 0.5552 0.5487 0.5552 1.60e-121 2ep7:A
10 3doc:A 335 329 0.5463 0.5463 0.5562 1.96e-120 3doc:B, 3doc:C, 3doc:D
11 3hja:A 334 334 0.5463 0.5479 0.5479 3.76e-120 3hja:B, 3hja:C, 3hja:D
12 8br4:A 339 337 0.5373 0.5310 0.5341 1.59e-119 8br4:B, 8br4:C, 8br4:D, 8br4:E, 8br4:F, 8br4:G, 8br4:H, 8br4:I, 8br4:J, 8br4:K, 8br4:L, 8br4:M, 8br4:N, 8br4:O, 8br4:P
13 3l0d:A 332 329 0.5224 0.5271 0.5319 9.45e-117 3l0d:B
14 3gnq:C 335 334 0.5254 0.5254 0.5269 1.69e-115 3gnq:B, 3gnq:D, 3gnq:E, 3gnq:F, 3gnq:G, 3gnq:H
15 1obf:O 335 327 0.5194 0.5194 0.5321 2.11e-114 1obf:P
16 7xzg:A 334 334 0.5104 0.5120 0.5120 1.61e-110 7xzg:B, 7xzg:C, 7xzg:D
17 1cer:O 331 331 0.5224 0.5287 0.5287 3.49e-108 1cer:P, 1cer:Q, 1cer:R, 1cer:A, 1cer:B, 1cer:C, 1cer:D, 2g82:O, 2g82:P, 2g82:Q, 2g82:R, 2g82:A, 2g82:B, 2g82:C, 2g82:D, 1vc2:A
18 7bew:A 330 331 0.4985 0.5061 0.5045 1.83e-107 7bex:A
19 4mvj:B 332 327 0.4806 0.4849 0.4924 1.56e-106 1dc4:A, 1dc4:B, 1dc6:A, 1dc6:B, 1gad:O, 1gad:P, 1gae:O, 1gae:P, 6io6:A, 4mvj:A, 4mvj:C, 4mvj:D, 4mvj:E, 4mvj:F, 4mvj:G, 4mvj:I, 4mvj:J, 4mvj:K, 4mvj:L, 4mvj:M, 4mvj:O, 4mvj:P, 6utm:A, 6utm:B, 6utn:A, 6utn:B, 6uto:A, 6uto:B, 2vyn:A, 2vyn:B, 2vyn:C, 2vyv:A, 2vyv:B, 2vyv:C, 5za0:A
20 8de5:A 338 333 0.4836 0.4793 0.4865 2.97e-106
21 4p8r:A 331 327 0.4776 0.4834 0.4893 6.36e-106 4p8r:B, 4p8r:C, 4p8r:D
22 8hrq:B 336 333 0.5224 0.5208 0.5255 7.58e-106 8hro:A, 8hro:B, 8hrp:A, 8hrp:B, 8hrp:C, 8hrp:D, 8hrp:E, 8hrp:F, 8hrp:G, 8hrp:H, 8hrq:A, 8hrr:A, 8hrr:B, 8hrs:A, 8hrs:B, 8hrs:C, 8hrs:D, 8hrt:A, 8hrt:B, 8hrt:C, 8hrt:D
23 8oha:B 336 333 0.4985 0.4970 0.5015 3.86e-104 8oha:A, 8oha:C, 8oha:D, 8oha:E, 8oha:F, 8oha:G, 8oha:H
24 4lsm:A 331 327 0.4657 0.4713 0.4771 3.35e-102 4lsm:B
25 6ok4:A 334 334 0.4597 0.4611 0.4611 4.65e-101 6ok4:B, 6ok4:C, 6ok4:D, 6wyc:A, 6wyc:B, 6wyc:C, 6wyc:D, 6x2e:A, 6x2e:C, 6x2e:D
26 6nlx:C 335 329 0.4657 0.4657 0.4742 1.85e-100 6nlx:B, 6nlx:D, 5ur0:A, 5ur0:B, 5ur0:C, 5ur0:D
27 3pym:A 332 333 0.4776 0.4819 0.4805 2.93e-100 3pym:B
28 7jwk:C 333 335 0.4836 0.4865 0.4836 6.07e-100 7jwk:A, 7jwk:B, 7jwk:D
29 3e5r:O 336 330 0.4597 0.4583 0.4667 1.34e-99 3e5r:A, 3e5r:B, 3e5r:C, 3v1y:O, 3v1y:A, 3v1y:B, 3v1y:C
30 6qun:O 334 330 0.4627 0.4641 0.4697 1.46e-99 6qun:R, 6quq:O, 6quq:R, 4z0h:O, 4z0h:R
31 6m5x:O 334 327 0.4627 0.4641 0.4740 3.31e-99 6m5x:R, 6m5x:P, 6m5x:Q
32 1ywg:O 337 336 0.4627 0.4599 0.4613 3.93e-99 2b4r:O, 2b4r:P, 2b4r:Q, 2b4r:R, 2b4t:O, 2b4t:P, 2b4t:Q, 2b4t:R, 1ywg:P, 1ywg:Q, 1ywg:R
33 5vmt:B 334 331 0.4866 0.4880 0.4924 1.22e-98 5vmt:A, 5vmt:C, 5vmt:D, 5vmt:F, 5vmt:G, 5vmt:H
34 1dss:G 333 327 0.4567 0.4595 0.4679 3.28e-98 1dss:R, 1gpd:G, 1gpd:R, 1ihx:A, 1ihx:B, 1ihx:C, 1ihx:D, 1ihy:A, 1ihy:B, 1ihy:C, 1ihy:D, 1szj:G, 1szj:R
35 3cif:A 338 335 0.4627 0.4586 0.4627 5.30e-97 3cif:B, 3cif:C, 3cif:D, 3cps:A, 3cps:B, 8pvf:A, 1vsv:A, 1vsv:B, 1vsv:C, 1vsv:D
36 5m6d:A 346 329 0.4657 0.4509 0.4742 1.02e-95 6fzh:A, 6fzh:B, 6ite:P, 6ite:Q, 6ite:R, 6ite:O
37 4k9d:A 338 339 0.4746 0.4704 0.4690 7.12e-95 4k9d:B, 4k9d:C, 4k9d:D, 4k9d:E, 4k9d:F, 4k9d:G, 4k9d:H
38 1a7k:A 358 349 0.4866 0.4553 0.4670 1.63e-94 1a7k:B, 1a7k:C, 1a7k:D, 1gyp:A, 1gyp:B, 1gyp:C, 1gyp:D, 1gyq:A, 1gyq:B, 1gyq:C, 1gyq:D, 1i32:A, 1i32:B, 1i32:C, 1i32:D, 1i32:E, 1i32:F, 1i33:A, 1i33:B, 1i33:C, 1i33:D, 1i33:E, 1i33:F
39 2i5p:O 309 332 0.4657 0.5049 0.4699 1.80e-94 2i5p:P
40 6fzi:B 332 330 0.4806 0.4849 0.4879 8.99e-94 6fzi:A, 6fzi:C, 6fzi:D
41 6m61:O 336 329 0.4478 0.4464 0.4559 3.76e-93 6ade:A, 5ddi:P, 5ddi:R, 5ddi:S, 6iq6:A, 6iq6:B, 6iq6:C, 6iq6:D, 6iq6:E, 1j0x:P, 1j0x:R, 6lgj:A, 6lgj:B, 6lgj:C, 6lgj:D, 6lgk:A, 6lgk:B, 6lgk:C, 6lgm:A, 6lgm:B, 6lgm:C, 6m61:Q, 6m61:P, 4o59:O, 4o59:P, 4o59:R, 4o59:Q, 4o63:P, 4o63:Q, 4o63:R, 8p5f:AAA, 8p5f:DDD, 8p5f:EEE, 8p5f:GGG, 5tso:P, 5tso:R, 5tso:S, 7u5m:A, 7u5m:B, 7u5m:C, 7u5m:D, 1u8f:P, 1u8f:Q, 1u8f:R, 4wnc:O, 4wnc:E, 4wnc:A, 4wnc:B, 4wnc:C, 4wnc:D, 4wni:O, 4wni:A, 4wni:B, 1znq:O, 1znq:P, 1znq:R, 1znq:Q
42 5utm:A 345 330 0.4567 0.4435 0.4636 3.13e-92 5jy6:A, 5jy6:B, 5jy6:C, 5jy6:D, 5jya:A, 5jya:B, 5jya:C, 5jya:D, 5jye:A, 5jye:C, 4qx6:A, 4qx6:B, 4qx6:C, 4qx6:D, 5utl:A, 5utl:B, 5utl:C, 5utl:D, 5utm:B, 5utm:C, 5utm:D, 5v8x:A, 5v8x:B, 5v8x:C, 5v8x:D, 5y37:A, 5y37:B
43 3gpd:R 334 329 0.4358 0.4371 0.4438 1.29e-91 3gpd:G
44 3dmt:A 359 350 0.4537 0.4234 0.4343 1.34e-91 3dmt:B, 3dmt:C, 3dmt:D, 3ids:D, 1k3t:C, 1ml3:B, 1ml3:C, 1ml3:D, 1qxs:C, 1qxs:D, 1qxs:A, 1qxs:B, 2x0n:A, 2x0n:B, 2x0n:O, 2x0n:P, 2x0n:Q, 2x0n:R
45 9iil:A 341 337 0.4418 0.4340 0.4392 3.07e-90 9iil:B, 9iil:C, 9iil:D, 9iim:A, 9iim:C, 9iim:B, 9iim:D, 9ij6:A, 9ij6:C, 9ij6:B, 9ij6:D, 8zn1:A, 8zn1:C, 8zn1:B, 8zn1:D, 8zn4:A, 8zn4:B, 8zn4:C, 8zn4:D, 8zoz:A, 8zoz:C, 8zoz:B, 8zoz:D
46 5ld5:C 342 333 0.4597 0.4503 0.4625 9.05e-89 5ld5:A, 5ld5:B, 5ld5:D
47 3sth:C 340 335 0.4388 0.4324 0.4388 2.49e-88 3sth:A, 3sth:B, 3sth:D
48 3h9e:P 337 330 0.4299 0.4273 0.4364 4.79e-88 5c7o:O, 5c7o:P, 3h9e:O, 3pfw:O, 3pfw:P
49 2vyn:D 334 329 0.4269 0.4281 0.4347 9.84e-88 2vyv:D
50 2xf8:M 327 328 0.4119 0.4220 0.4207 2.16e-85 2xf8:A, 2xf8:C, 2xf8:E, 2xf8:G, 2xf8:I, 2xf8:K, 2xf8:O
51 3lvf:P 338 330 0.4388 0.4349 0.4455 3.38e-85 3hq4:R, 3hq4:O, 3hq4:P, 3hq4:Q, 3k73:Q, 3k73:O, 3k73:P, 3k73:R, 3k9q:Q, 3k9q:O, 3k9q:P, 3k9q:R, 3ksd:Q, 3ksd:R, 3ksd:O, 3ksd:P, 3ksz:O, 3ksz:P, 3ksz:R, 3ksz:Q, 3kv3:O, 3kv3:Q, 3kv3:R, 3kv3:P, 3l4s:Q, 3l4s:P, 3l4s:O, 3l4s:R, 3l6o:Q, 3l6o:P, 3l6o:R, 3l6o:O, 3lc1:P, 3lc1:R, 3lc1:O, 3lc1:Q, 3lc2:O, 3lc2:Q, 3lc2:R, 3lc2:P, 3lvf:R, 3lvf:O, 3lvf:Q, 5t73:A, 5t73:B, 5t73:C, 5t73:D, 3vaz:P, 3vaz:R, 3vaz:O, 3vaz:Q, 3vaz:B, 3vaz:A
52 7www:A 336 332 0.4478 0.4464 0.4518 2.98e-83
53 6px2:A 332 334 0.4328 0.4367 0.4341 4.29e-83 6px2:B, 6px2:C, 6px2:D, 6px2:E, 6px2:F, 6px2:G, 6px2:H
54 7c5o:O 338 327 0.4448 0.4408 0.4557 3.32e-82 7c5f:O, 7c5f:P, 7c5f:Q, 7c5f:R, 7c5g:O, 7c5g:P, 7c5g:Q, 7c5g:R, 7c5h:O, 7c5h:P, 7c5h:Q, 7c5h:R, 7c5i:O, 7c5i:P, 7c5i:Q, 7c5i:R, 7c5j:O, 7c5j:P, 7c5j:Q, 7c5j:R, 7c5k:O, 7c5k:P, 7c5k:Q, 7c5k:R, 7c5l:O, 7c5l:P, 7c5l:Q, 7c5l:R, 7c5m:O, 7c5m:P, 7c5m:Q, 7c5m:R, 7c5n:O, 7c5n:P, 7c5n:Q, 7c5n:R, 7c5o:P, 7c5o:Q, 7c5o:R, 7c5p:O, 7c5p:P, 7c5p:Q, 7c5p:R, 7c5q:O, 7c5q:P, 7c5q:Q, 7c5q:R, 7c5r:O, 7c5r:P, 7c5r:Q, 7c5r:R, 7c7k:O, 7c7k:P, 7c7k:Q, 7c7k:R
55 8hmn:D 340 332 0.4299 0.4235 0.4337 4.61e-80 8hmn:A, 8hmn:B, 8hmn:C, 6iqm:A, 6iqm:B, 6iqm:C, 6iqm:D
56 5vmt:E 293 332 0.4179 0.4778 0.4217 1.65e-73
57 8jb1:A 468 342 0.3970 0.2842 0.3889 5.45e-67 8jb1:B
58 3tz6:A 342 59 0.0537 0.0526 0.3051 0.023 3vos:A
59 3kv6:D 448 105 0.0776 0.0580 0.2476 1.4 3kv5:D, 3kv5:A, 3kv6:A, 3kv9:A, 3kva:A, 3u78:A
60 5ynv:B 313 49 0.0537 0.0575 0.3673 1.4 5y72:A, 5y72:B, 5y7c:A, 5y7c:B, 5y84:A, 5y84:B, 5ynt:A, 5ynt:B, 5ynu:A, 5ynu:B, 5ynv:A, 5ynw:A, 5ynw:B
61 2yd1:A 196 70 0.0627 0.1071 0.3000 4.8
62 1ys4:A 348 67 0.0567 0.0546 0.2836 5.5 1ys4:B
63 1l1o:C 173 56 0.0507 0.0983 0.3036 6.6 1l1o:F
64 3aoe:B 424 48 0.0507 0.0401 0.3542 7.6 3aoe:A, 3aog:A, 3aog:E, 3aog:B, 3aog:D, 3aog:C, 3aog:F, 3aog:G, 3aog:I, 3aog:H, 3aog:J, 3aog:L, 3aog:K
65 3pyl:C 361 96 0.0746 0.0693 0.2604 7.8 2gz1:A, 2gz1:B, 2gz2:A, 2gz2:B, 2gz3:A, 2gz3:B, 2gz3:C, 2gz3:D, 3pwk:A, 3pwk:B, 3pws:A, 3pws:B, 3pyl:A, 3pyl:B, 3pyx:A, 3pyx:B, 3pzb:A, 3pzb:B, 3q11:A, 3q11:B, 3q1l:A, 3q1l:B, 3q1l:C, 3q1l:D, 4r3n:A, 4r3n:B, 4r3w:A, 4r3w:B, 4r41:A, 4r41:B, 4r4j:A, 4r4j:B, 4r51:A, 4r51:B, 4r54:A, 4r54:B, 4r5h:A, 4r5h:B
66 2oaj:A 875 119 0.0955 0.0366 0.2689 7.9
67 1cf2:P 336 172 0.1284 0.1280 0.2500 9.2 1cf2:R, 1cf2:O, 1cf2:Q

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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