Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
KLANPLYTEWILEAIKKVKKQKQRPSEERICNAVSSSHGLDRKTVLEQLELSVKDGTILKVSNKGLNSYKDPDNPGRIA

The query sequence (length=79) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7y43:A 79 79 1.0000 1.0000 1.0000 7.06e-54 8h7a:A, 8h7a:B, 8h7a:E, 8h7a:F
2 6lui:A 71 68 0.3291 0.3662 0.3824 5.90e-12
3 4j0h:A 470 28 0.1519 0.0255 0.4286 0.13 4j0h:B, 4j0j:A, 4j0j:B, 4j0k:A, 4j0k:B, 4jui:A, 4jui:B, 3wa7:A
4 1iq8:A 577 71 0.2532 0.0347 0.2817 0.86 1iq8:B, 1it7:A, 1it7:B, 1it8:A, 1it8:B, 1j2b:A, 1j2b:B
5 6zu5:ST0 139 51 0.2532 0.1439 0.3922 2.6
6 7bbr:A 310 43 0.1646 0.0419 0.3023 4.0 7bcn:A, 7bco:A, 7bco:B, 7bcp:A, 7bcr:A
7 4dyn:A 437 47 0.1519 0.0275 0.2553 5.5 5b7b:A, 5b7b:C, 5b7b:D, 4bbl:D, 4bbl:F, 4bbl:H, 4bbl:J, 4bbl:L, 4bbl:N, 4bbl:P, 4bbl:R, 4bbl:T, 4bbl:V, 4bbl:X, 4bbl:A, 4bbl:C, 4bbl:E, 4bbl:G, 4bbl:I, 4bbl:K, 4bbl:M, 4bbl:O, 4bbl:Q, 4bbl:S, 4bbl:U, 4dya:A, 4dya:B, 4dyb:A, 4dyb:B, 4dyn:B, 4dyp:A, 4dyp:B, 6h9g:A, 6h9g:C, 6i54:A, 6i54:C, 6i7b:A, 6i7b:C, 6i7m:A, 6i7m:C, 3ro5:A, 3ro5:B, 3tg6:A, 3tg6:B

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218