BioLiP

>protein
KITTVIDIGSNSVRLAVFKKTSQFGFYLLFETKSKVRISEGCYAFNGILQEIPMQRAVKALSEFKEIALKYKSKKILCVA
TSAVRDAPNRLEFVARVKKACGLQIKIIDGQKEALYGGIACANLLHKNSGITIDIGGGSTACALIEKGKIKDLISLDVGT
IRIKAFIQKEVSKLPFKHKNAFGVGGTIRALSKVLMKRFDYPIDSLHGYEIDAHKNLAFIEKIVMLKEDQLRLLGVNEER
LDSIRSGALILSVVLEHLKTSLMITSGVGVREGVFLSDLLRNHYHKFPPNINPSLISLKDRFLPHEKHSQKVKKECVKLF
EALSPLHKIDEKYLFHLKIAGELASMGKILSVYLAHKHSAYFILNALSYGFSHQDRAIICLLAQFSHKKIPKDNAIAHMS
AMMPSLLTLQWLSFILSLAENLCLTDSHHLKYTLEKNKLVIHSNDALYLAKEMLPKLVKPIPLTIEFA

The query sequence (length=468) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	6pc1:B	483	482	1.0000	0.9689	0.9710	0.0	6pc1:A, 6pc1:C, 6pc1:D, 6pc2:A, 6pc2:B, 6pc3:A, 6pc3:B
2	1t6c:A	306	301	0.1838	0.2810	0.2857	3.11e-25	2j4r:A
3	8jgp:A	492	455	0.2350	0.2236	0.2418	1.30e-17	8jgo:A, 8jgq:A, 8jgr:A, 8jgt:A
4	8jgw:A	500	417	0.2115	0.1980	0.2374	2.64e-17
5	7epq:A	296	305	0.1709	0.2703	0.2623	3.39e-14	7epq:B
6	3h1q:B	272	60	0.0491	0.0846	0.3833	2.37e-04	3h1q:A
7	7fax:A	103	93	0.0641	0.2913	0.3226	0.088
8	8a22:Bm	113	60	0.0385	0.1593	0.3000	0.31	8apn:Bm, 8apo:Bm
9	3zx2:B	399	43	0.0385	0.0451	0.4186	0.76	3zx0:A, 3zx0:B, 3zx0:C, 3zx0:D, 3zx2:A, 3zx2:C, 3zx2:D
10	2n2h:B	125	93	0.0427	0.1600	0.2151	2.7
11	4xhp:A	723	121	0.0598	0.0387	0.2314	3.2
12	4czm:A	336	106	0.0620	0.0863	0.2736	4.4	4czf:A, 4czg:A, 4czh:A, 4czj:A, 4czj:B, 4czk:A, 4czl:A, 4czm:B
13	7bvy:A	333	82	0.0556	0.0781	0.3171	4.6	7bvz:A
14	8tzh:A	1485	136	0.0726	0.0229	0.2500	5.7	3d6t:B
15	7r2g:B	351	47	0.0321	0.0427	0.3191	5.8	6cpm:C, 6cpm:D, 6crn:A, 6crn:B, 6crn:C, 6crn:D, 6gh9:A, 6gha:A, 6ml1:A, 6ml1:B, 7r2g:A

[Back]