Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
KIPNNPGAGENALEPIYIKDDDGYDIDTFLIPDHYKNYITKVLIPNGVLKNRIEKLAFDIKQVYRNEEFHVICLLKGSRG
FFSALLKYLNRIHNYSSTESPKHLYVEHYVRVEDLSCLKDKHVLIVEDIIDTGKTLLKFCEYLKKFEVKTIAITCLFIKR
TPLWNGFKADFVGFSIPDAFVVGYSLDYNEKFRDLDHLCLVNDEGIKKFRT

The query sequence (length=211) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6bo7:A 220 217 1.0000 0.9591 0.9724 9.43e-153 6bo7:B, 6bo7:C, 6bo7:D, 6bo7:E, 6bo7:F, 6bo7:G, 6bo7:H, 6bo7:I, 6bo7:J, 6bo7:K, 6bo7:L
2 3ozf:B 234 226 0.8009 0.7222 0.7478 2.38e-125 1cjb:A, 1cjb:B, 1cjb:C, 1cjb:D, 3ozf:A, 3ozf:C, 3ozf:D, 3ozg:A, 3ozg:B, 3ozg:C, 3ozg:D, 7tux:A, 7tux:B, 7tux:C, 7tux:D
3 2vfa:B 205 208 0.5450 0.5610 0.5529 2.15e-78 2vfa:A
4 1fsg:A 233 219 0.5071 0.4592 0.4886 4.00e-67 1dbr:A, 1dbr:B, 1dbr:D, 1fsg:C, 1qk3:A, 1qk3:B, 1qk3:C, 1qk3:D, 1qk4:A, 1qk4:B, 1qk4:C, 1qk4:D, 1qk5:A, 1qk5:B
5 1bzy:A 214 211 0.4123 0.4065 0.4123 6.30e-51 6bnj:A, 6bnj:B, 6bnj:C, 6bnj:D, 5brn:A, 5brn:C, 5brn:D, 1bzy:B, 1bzy:C, 1bzy:D, 1d6n:A, 1d6n:B, 3gep:A, 3gep:B, 3ggc:A, 3ggc:B, 3ggj:A, 3ggj:B, 5hia:A, 5hia:B, 5hia:C, 5hia:D, 1hmp:A, 1hmp:B, 4ijq:A, 4ijq:B, 4ijq:C, 4ijq:D, 4rab:A, 4rab:B, 4rab:C, 4rab:D, 4rac:A, 4rac:B, 4rac:C, 4rac:D, 4rad:A, 4rad:B, 4rad:C, 4rad:D, 4rad:E, 4rad:F, 4rad:G, 4rad:H, 4ran:A, 4ran:B, 4ran:C, 4ran:D, 4rao:A, 4rao:B, 4rao:C, 4rao:D, 4raq:A, 4raq:B, 4raq:C, 4raq:D, 7san:A, 7san:B, 7san:C, 7san:D, 8tpv:A, 8tpv:B, 8tpv:C, 8tpv:D, 5w8v:A, 5w8v:B, 5w8v:C, 5w8v:D
6 5brn:B 194 197 0.3886 0.4227 0.4162 3.50e-49 5bsk:A, 5bsk:B, 5bsk:C, 5bsk:D, 4kn6:A, 8tpy:A, 8tpy:B, 8tpy:C, 8tpy:D
7 2jbh:B 213 214 0.3791 0.3756 0.3738 4.23e-43 2jbh:A
8 5ipf:A 201 190 0.3649 0.3831 0.4053 5.81e-43 5ipf:B, 5ipf:C, 5ipf:D
9 6igs:B 167 163 0.2749 0.3473 0.3558 3.17e-25 6igs:A, 6igs:C, 6igs:D
10 5knx:B 176 171 0.2796 0.3352 0.3450 1.69e-22 1g9s:A, 1g9s:B, 1g9t:A, 1g9t:B, 1grv:B, 1grv:A, 1j7j:A, 1j7j:B, 5knr:A, 5knr:B, 5kns:A, 5kns:B, 5knt:A, 5knt:B, 5knu:A, 5knu:B, 5knv:A, 5knv:B, 5knx:A
11 3kb8:A 201 171 0.2796 0.2935 0.3450 1.61e-20 6d9r:A, 6d9r:B, 6d9s:A, 6d9s:B, 3h83:A, 3h83:B, 3kb8:B
12 4qyi:B 171 182 0.2701 0.3333 0.3132 1.19e-16 4qyi:A, 4qyi:C, 4qyi:D, 4qyi:E
13 2geb:A 184 172 0.2559 0.2935 0.3140 4.78e-16 1r3u:A, 1r3u:B, 1yfz:A, 1yfz:B
14 4pfq:C 184 174 0.2275 0.2609 0.2759 7.47e-16 4pfq:A, 4pfq:B, 4pfq:D, 4pfq:E, 4pfq:F, 4pfq:G, 4pfq:H
15 1hgx:A 164 163 0.2180 0.2805 0.2822 3.52e-14
16 3acc:A 166 164 0.2133 0.2711 0.2744 1.78e-13 3acd:A
17 5kny:B 187 177 0.2464 0.2781 0.2938 2.86e-13 5knp:A, 5knp:B, 5knp:C, 5knp:D, 5knq:A, 5knq:B, 5knq:C, 5knq:D, 5kny:A, 5kny:C, 5kny:D, 4rht:A, 4rht:B, 4rht:C, 4rht:D, 4rhu:A, 4rhu:B, 4rhu:C, 4rhu:D, 4rhu:E, 4rhu:F, 4rhx:A, 4rhx:B, 4rhx:C, 4rhx:D, 4rhy:A, 4rhy:B, 4rhy:C, 4rhy:D
18 6aps:A 185 166 0.2275 0.2595 0.2892 3.87e-13 6aps:B, 6apt:A, 6apt:B, 6apu:A, 6apu:B, 6apv:A, 6apv:B, 6apv:C, 6apv:D, 5jsq:A, 5jsq:B, 5jv5:A, 5jv5:B, 5k51:A, 5k51:B, 5k51:C, 5k51:D, 5kam:A, 5kam:C, 5kap:A, 5kap:B, 6mxg:A, 6mxg:B, 7sb7:A, 7sb7:B, 8tr1:A, 8tr1:B, 8tr1:C, 8tr1:D, 8ts4:A, 8ts4:B
19 8fx3:B 223 140 0.1896 0.1794 0.2857 6.23e-13 8fwy:A, 8fwy:B, 8fwz:A, 8fwz:B, 8fx0:A, 8fx0:B, 8fx1:A, 8fx1:B, 8fx2:A, 8fx2:B, 8fx3:A
20 6mxc:C 220 151 0.1991 0.1909 0.2781 3.06e-12 6aqo:A, 6aqo:B, 6aqo:C, 6aqo:D, 6aqo:E, 6aqo:F, 6ar9:A, 6ar9:B, 6ar9:C, 6ar9:D, 6ar9:E, 6ar9:F, 6mxb:A, 6mxb:B, 6mxb:C, 6mxb:D, 6mxb:E, 6mxb:F, 6mxc:A, 6mxc:B, 6mxc:D, 6mxc:E, 6mxc:F, 6mxd:A, 6mxd:B, 6mxd:C, 6mxd:D, 7scr:A, 7scr:C, 7scr:B, 7scr:D, 7scr:E, 7scr:F
21 1p17:B 204 185 0.2464 0.2549 0.2811 2.95e-11 1i0i:A, 1i0i:B, 1i0l:A, 1i0l:B, 1i13:A, 1i13:B, 1i14:A, 1i14:B, 1p17:A, 1p17:C, 1p17:D, 1p18:A, 1p18:B, 1p19:A, 1p19:B, 1p19:C, 1p19:D, 1tc1:A, 1tc1:B, 1tc2:A, 1tc2:B
22 7cmj:A 184 144 0.1754 0.2011 0.2569 6.44e-11 1pzm:A, 1pzm:B
23 5esw:A 190 188 0.2322 0.2579 0.2606 4.88e-10 5esx:A, 5esx:B
24 1i5e:A 208 99 0.1185 0.1202 0.2525 0.007 1i5e:B
25 6asv:C 311 79 0.1090 0.0740 0.2911 0.060 6asv:A, 6asv:B, 4s2u:A, 7xmu:A, 7xmu:F, 7xmu:C, 7xmu:D, 7xmu:B, 7xmu:E, 7xmv:A, 7xmv:F, 7xmv:C, 7xmv:E, 7xmv:B, 7xmv:D, 7xn3:A, 7xn3:E, 7xn3:C, 7xn3:B, 7xn3:D, 7xn3:F
26 1u9z:A 274 81 0.1232 0.0949 0.3210 0.069 1u9z:B, 1u9z:C, 1u9z:D
27 3q4r:A 170 54 0.0948 0.1176 0.3704 0.100 3q4o:A, 3q4q:A
28 4zfn:B 177 55 0.0806 0.0960 0.3091 0.23 5bqp:A, 5bqp:B, 5bqp:C, 5bqp:D, 4z1o:A, 4z1o:B, 4zfn:A
29 3mbi:A 287 76 0.0995 0.0732 0.2763 0.41 3lpn:A, 3lpn:B, 3lrt:A, 3lrt:B, 3mbi:C, 3mbi:B, 3mbi:D, 3nag:A, 3nag:B
30 5kwi:A 283 48 0.0806 0.0601 0.3542 1.1 5kwj:A, 5kwj:B, 5ocj:A, 5ocj:B, 4qe3:A, 4qek:A, 5vns:A
31 4rv4:B 211 39 0.0569 0.0569 0.3077 1.3 4rv4:A, 4rv4:C
32 6fci:A 179 36 0.0474 0.0559 0.2778 2.8 6fch:A, 6fch:B, 6fci:D, 6fci:B, 6fci:C, 6fcl:A, 6fcl:B, 6fd4:B, 6fd4:A, 6fd5:A, 6fd5:B, 6fd6:A, 6fd6:B, 6hgp:A, 6hgq:A, 6hgq:C, 6hgq:D, 6hgq:B, 6hgr:A, 6hgr:B, 6hgs:A, 6hgs:B, 1ore:A, 4x44:A, 4x45:B, 1zn7:A, 1zn7:B, 1zn8:A, 1zn8:B, 1zn9:B
33 4p86:A 177 60 0.0664 0.0791 0.2333 3.2 4p86:B, 4p86:C, 4p86:D
34 6nfe:B 299 32 0.0616 0.0435 0.4062 3.7 6nfe:A
35 8aaf:q 191 176 0.1943 0.2147 0.2330 3.8 8agt:q, 8agu:q, 8agv:q, 8agw:q, 8agx:q, 8agz:q, 5apn:H, 5apo:H, 7azy:e, 7b7d:LK, 8bip:LH, 8bjq:LH, 8bn3:L9, 8bqd:AD, 8bqx:AD, 7bt6:H, 7btb:H, 8ccs:LL, 8cdl:LL, 8cdr:LL, 8ceh:LL, 8cf5:LL, 8cg8:LL, 8cgn:LL, 8civ:LL, 8cku:LL, 8cmj:LL, 5dat:L9, 5dat:l9, 5dc3:L9, 5dc3:l9, 5dge:L9, 5dge:l9, 5dgf:L9, 5dgf:l9, 5dgv:L9, 5dgv:l9, 6elz:H, 6em1:H, 6em5:H, 8eub:AH, 8evp:AH, 8evq:AH, 8evr:AH, 8evs:AH, 8evt:AH, 8ewb:AH, 8ewc:AH, 5fci:L9, 5fci:l9, 5fcj:L9, 5fcj:l9, 6ft6:H, 5gak:L, 6gq1:H, 6gqb:H, 6gqv:H, 5h4p:H, 6hd7:L, 8hfr:Ib, 6hhq:q, 6hhq:CK, 5i4l:L9, 5i4l:l9, 6i7o:AD, 6i7o:XD, 3j16:F, 3j6x:L9, 3j6y:L9, 3j77:L9, 3j78:L9, 3jct:H, 5jcs:H, 5juo:M, 5jup:M, 5jus:M, 5jut:M, 5juu:M, 8k2d:LH, 8k82:LH, 5lyb:L9, 5lyb:l9, 5m1j:H5, 6m62:H, 5mc6:AD, 5mei:q, 5mei:CK, 7mpi:AH, 7mpj:AH, 6n8j:H, 6n8k:H, 6n8l:H, 6n8m:K, 6n8n:K, 6n8o:K, 7n8b:AH, 7nac:H, 5ndg:L9, 5ndg:l9, 5ndv:L9, 5ndv:l9, 5ndw:L9, 5ndw:l9, 7nrc:LK, 7nrd:LK, 5obm:L9, 5obm:l9, 7of1:H, 7oh3:H, 7ohp:H, 7ohq:H, 7ohr:H, 7oht:H, 7ohu:H, 7ohv:H, 7ohw:H, 7ohy:H, 6oig:H, 5on6:q, 5on6:CK, 7osa:uL6, 7osm:uL6, 8p8m:LM, 8p8n:LM, 8p8u:LM, 8pfr:LM, 6q8y:AD, 6qik:F, 6qt0:F, 6qtz:F, 7r7a:H, 6r84:7, 6r86:7, 6r87:7, 6ri5:F, 7rr5:LH, 6rzz:F, 6s05:F, 6s47:AK, 6snt:o, 6sv4:AD, 6sv4:XD, 6sv4:zD, 6t4q:LH, 5t62:K, 5t6r:K, 6t7i:LH, 6t7t:LH, 6t83:Hy, 6t83:Ka, 5tbw:q, 5tbw:CK, 6tb3:AD, 5tga:L9, 5tga:l9, 5tgm:L9, 5tgm:l9, 6tnu:AD, 7too:AL09, 7top:AL09, 7u0h:H, 4u3m:L9, 4u3m:l9, 4u3n:L9, 4u3n:l9, 4u3u:L9, 4u3u:l9, 4u4n:L9, 4u4n:l9, 4u4o:L9, 4u4o:l9, 4u4q:L9, 4u4q:l9, 4u4r:L9, 4u4r:l9, 4u4u:L9, 4u4u:l9, 4u4y:L9, 4u4y:l9, 4u4z:L9, 4u4z:l9, 4u50:L9, 4u50:l9, 4u51:L9, 4u51:l9, 4u52:L9, 4u52:l9, 4u53:L9, 4u53:l9, 4u55:L9, 4u55:l9, 4u56:L9, 4u56:l9, 4u6f:L9, 4u6f:l9, 7ug6:H, 7uoo:H, 7uqb:H, 7uqz:H, 7v08:H, 4v4b:BH, 4v6i:BF, 4v7h:BH, 4v7r:BI, 4v7r:DI, 4v88:BH, 4v88:DH, 4v8t:H, 4v8y:BH, 4v8z:BH, 8v83:H, 8v84:H, 8v87:H, 4v91:H, 6woo:H, 6xiq:H, 6xir:H, 8y0u:LH, 6ylg:H, 6ylh:H, 6ylx:H, 6yly:H, 5z3g:L, 7z34:H, 6z6j:LH, 6z6k:LH, 7zpq:BH, 7zrs:BH, 7zs5:BJ, 7zuw:BH, 7zux:EH, 7zw0:LL
36 4twb:A 278 50 0.0664 0.0504 0.2800 4.7 4twb:B, 4twb:C, 4twb:D, 4twb:E, 4twb:F
37 4paw:A 197 38 0.0569 0.0609 0.3158 5.1 4paw:B
38 8e73:V2 222 56 0.0806 0.0766 0.3036 5.1 6x89:V2
39 4trb:B 209 46 0.0900 0.0909 0.4130 5.5 4trc:A, 4trc:B, 4ts5:A, 4ts5:B, 4ts7:A, 4ts7:B
40 3qw4:C 447 38 0.0521 0.0246 0.2895 6.2 3qw4:B
41 2igb:B 173 60 0.0616 0.0751 0.2167 6.5 2igb:A, 4p83:A, 4p83:B, 4p83:C, 4p83:D, 1xz8:A, 1xz8:B, 1xzn:A, 1xzn:B
42 1xvl:A 279 58 0.0900 0.0681 0.3276 8.7 4irm:A, 4irm:B, 3ujp:A, 3ujp:B, 3ujp:C, 1xvl:B

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218