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BioLiP
>protein
KIHHHHHHMEELLDILREFRDSRGWLKYHTPKNLAVSISIEVAELLEIFQWTRSSDEEFEVLERRKGEVEEEIADVLIYL
LFLCDVAEINPIEAVKRKMEKNERKYPK

The query sequence (length=108) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4qgp:A 108 108 1.0000 1.0000 1.0000 2.37e-75 4qgp:B
2 6sqw:A 114 100 0.3056 0.2895 0.3300 2.11e-15 2oig:B, 2oig:A, 2oig:D, 6sqw:D, 6sqy:A, 6sqy:D, 6sqz:A, 6sqz:D
3 7mu5:A 110 91 0.3148 0.3091 0.3736 5.66e-15 7mu5:E, 7mu5:B, 7mu5:H, 7mu5:C, 7mu5:D, 7mu5:F, 7mu5:G
4 5tr9:A 246 80 0.2130 0.0935 0.2875 0.12 5tr9:B, 5ufa:A, 5ufa:B, 5ufa:C
5 2q5z:B 94 50 0.1667 0.1915 0.3600 0.18 2q5z:A, 2q73:A, 2q73:B, 2q73:C, 2q73:D, 2q9l:A, 2q9l:B, 2q9l:C, 2q9l:D
6 6dnt:A 310 49 0.1296 0.0452 0.2857 0.29
7 4dl8:A 224 43 0.1296 0.0625 0.3256 0.51 4dk4:A, 4dk4:B, 4dkb:A, 4dlc:A
8 2yb0:E 264 45 0.1389 0.0568 0.3333 1.1 2cje:A, 2yay:A, 2yaz:A, 2yaz:B, 2yaz:D, 2yaz:E, 2yb0:A, 2yb0:B, 2yb0:D
9 4iqj:D 1185 37 0.1111 0.0101 0.3243 2.0 3e0d:A, 3e0d:B, 2hpi:A, 2hpm:A, 4iqj:B, 4iqj:C
10 4iqj:A 1164 37 0.1111 0.0103 0.3243 2.0
11 7kn1:A 336 48 0.1296 0.0417 0.2917 2.3 7kn1:B
12 5u9p:B 261 61 0.1574 0.0651 0.2787 2.4 5u9p:A, 5u9p:C, 5u9p:D
13 4qfh:B 611 29 0.1204 0.0213 0.4483 2.5 4qfh:A
14 3bem:B 210 25 0.0926 0.0476 0.4000 4.4 3bem:A
15 5tp4:B 409 11 0.0741 0.0196 0.7273 5.9 5tp4:A
16 7ody:C 100 34 0.1111 0.1200 0.3529 6.2 7ody:A, 7ody:B, 7ody:D
17 3rss:A 494 22 0.1019 0.0223 0.5000 6.4 2ax3:A, 3rrb:A, 3rre:A, 3rrf:A, 3rrj:A, 3rs8:A, 3rs9:A, 3rsf:A, 3rsg:A, 3rsq:A, 3rt7:A, 3rt9:A, 3rta:A, 3rtb:A, 3rtc:A, 3rtd:A, 3rte:A, 3rtg:A, 3ru2:A, 3ru3:A
18 5xg3:B 374 44 0.1574 0.0455 0.3864 7.9 5h67:A, 5xg3:A
19 1k8c:B 319 27 0.0926 0.0313 0.3704 8.1 1k8c:A, 1k8c:C, 1k8c:D, 1mi3:A, 1mi3:B, 1mi3:C, 1mi3:D, 1r38:A, 1r38:B, 1r38:C, 1r38:D, 1sm9:A, 1sm9:B, 1sm9:C, 1sm9:D, 1ye4:A, 1ye4:B, 1ye4:C, 1ye4:D, 1ye6:A, 1ye6:B, 1ye6:C, 1ye6:D, 1z9a:A, 1z9a:B, 1z9a:C, 1z9a:D
20 5vk4:B 330 25 0.0926 0.0303 0.4000 8.6 5vk4:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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