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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
KHELPNLPYAYDALEPHFDKETMNIHHTKHHNTYITNLNAALEGHAELADKSVEELVANLNEVPEAIRTAVRNNGGGHAN
HTFFWTILSPNGGGQPVGELATAIEAKFGSFDAFKEEFAKAGATRFGSGWAWLVVNNGELEVTSTPNQDSPLTEGKTPVI
GLDVWEHAYYLNYQNRRPDYIGAFWNVVDWNAAEKRYQEA

The query sequence (length=200) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1xuq:A 200 200 1.0000 1.0000 1.0000 2.27e-149 1xuq:B
2 6pro:A 202 198 0.7850 0.7772 0.7929 4.69e-121 6pro:B
3 2rcv:A 200 198 0.7650 0.7650 0.7727 1.06e-114 2rcv:B, 2rcv:C, 2rcv:D, 2rcv:E, 2rcv:F, 2rcv:G, 2rcv:H
4 1jr9:A 201 200 0.7050 0.7015 0.7050 1.25e-107
5 5n56:A 198 195 0.6550 0.6616 0.6718 5.03e-99 6ex3:A, 6ex3:B, 6ex3:C, 6ex3:D, 5n56:B, 6qv9:A, 6qv9:B, 7w6w:C
6 7wnk:D 202 198 0.6450 0.6386 0.6515 5.68e-97 7ddw:A, 7ddw:B, 7ddw:C, 7ddw:D, 7ddw:E, 7ddw:F, 6m30:A, 6m30:B, 6m30:C, 6m30:D, 6m30:E, 6m30:F, 7w6w:A, 7w6w:B, 7w6w:D, 7wnk:A, 7wnk:B, 7wnk:C, 7wnl:A, 7wnl:B, 7wnl:C, 7wnl:D, 5x2j:A
7 6bej:E 201 200 0.6500 0.6468 0.6500 6.79e-95 6bej:A
8 6ex4:A 198 198 0.6000 0.6061 0.6061 5.19e-91 6ex4:B, 6ex5:A, 6ex5:B, 5n57:A, 5n57:B, 6qv8:A, 6qv8:B
9 1gv3:A 213 199 0.6050 0.5681 0.6080 1.21e-90 1gv3:B
10 1y67:D 214 209 0.6300 0.5888 0.6029 9.48e-90 2aw9:A, 2aw9:B, 2cdy:A, 2cdy:B, 2cdy:C, 2cdy:D, 2ce4:A, 2ce4:B, 3kky:A, 3kky:B, 1y67:A, 1y67:B, 1y67:C
11 3mds:A 203 199 0.5750 0.5665 0.5779 1.02e-84 3mds:B, 1mng:A, 1mng:B
12 1xre:A 201 198 0.5400 0.5373 0.5455 2.37e-84 1xre:B
13 8kb3:A 206 202 0.6100 0.5922 0.6040 2.75e-84 1d5n:A, 1d5n:B, 1d5n:C, 1d5n:D, 1en4:A, 1en4:B, 1en4:C, 1en4:D, 1en5:A, 1en5:B, 1en5:C, 1en5:D, 1en6:A, 1en6:B, 1en6:C, 1en6:D, 1i08:A, 1i08:B, 1i08:C, 1i08:D, 1i0h:A, 1i0h:B, 1ix9:A, 1ix9:B, 3k9s:A, 3k9s:B, 3k9s:C, 3k9s:D, 8kb3:B, 1mmm:A, 1mmm:B, 1vew:A, 1vew:B, 1vew:C, 1vew:D, 1zlz:B
14 4yio:A 202 198 0.5700 0.5644 0.5758 2.85e-83 4yio:B
15 8avk:A 202 198 0.5600 0.5545 0.5657 1.10e-81 8avk:B, 8avn:A, 8avn:B
16 4yip:A 203 198 0.5650 0.5567 0.5707 6.14e-78 4yip:B, 4yip:C, 4yip:D
17 4jyy:A 202 199 0.5400 0.5347 0.5427 1.26e-75 4jz2:A, 4jzg:A, 3tjt:A
18 5a9g:A 206 199 0.5200 0.5049 0.5226 8.42e-71 5a9g:B, 6gsb:A, 6gsb:B, 6gsc:A, 6gsc:B
19 7kks:A 199 204 0.5100 0.5126 0.5000 1.37e-67 2adp:A, 2adq:B, 1ap5:A, 1ap5:B, 1ap6:A, 1ap6:B, 3c3s:A, 3c3s:B, 3c3t:A, 3c3t:B, 1em1:A, 1em1:B, 2gds:A, 2gds:B, 2gds:C, 2gds:D, 5gxo:A, 5gxo:B, 1ja8:A, 1ja8:B, 7kks:B, 7kku:A, 7kku:B, 7kkw:A, 7kkw:B, 7klb:A, 7klb:B, 1luv:A, 1luv:B, 1luw:A, 1luw:B, 1msd:A, 1msd:B, 1n0j:A, 1n0j:B, 1n0n:A, 1n0n:B, 2p4k:A, 2p4k:B, 2p4k:C, 2p4k:D, 1pl4:A, 1pl4:B, 1pl4:C, 1pl4:D, 1pm9:A, 1pm9:B, 2qka:A, 2qka:C, 2qkc:A, 2qkc:C, 1qnm:A, 1qnm:B, 8sks:A, 8sks:B, 8sks:C, 8sks:D, 1szx:A, 1szx:B, 5t30:A, 5t30:B, 1var:A, 1var:B, 5vf9:A, 5vf9:B, 8vhw:A, 8vhw:B, 8vhy:A, 8vhy:B, 8vj0:A, 8vj0:B, 8vj4:A, 8vj4:B, 8vj5:A, 8vj5:B, 8vj8:A, 8vj8:B, 1xdc:A, 1xdc:B, 1xil:A, 1xil:B, 1zsp:A, 1zsp:B, 1zte:A, 1zte:B, 1zte:C, 1zte:D, 1zuq:A, 1zuq:B
20 6jov:C 198 194 0.4800 0.4848 0.4948 1.48e-67 6jov:A, 6jov:B, 6jov:D
21 1dt0:A 197 197 0.5050 0.5127 0.5127 2.62e-67 1dt0:B, 1dt0:C, 3sdp:A, 3sdp:B
22 4l2a:A 192 197 0.4850 0.5052 0.4924 1.61e-63 4l2a:B, 4l2b:A, 4l2b:B, 4l2c:A, 4l2c:B, 4l2c:D, 4l2c:C, 4l2d:A, 4l2d:D, 4l2d:C, 4l2d:B, 3lio:A, 3lio:B, 3lj9:B, 3lj9:A, 3ljf:A, 3ljf:C, 3ljf:B, 3ljf:D
23 3tqj:A 192 197 0.4650 0.4844 0.4721 5.77e-63 3tqj:B
24 2bkb:A 192 194 0.4700 0.4896 0.4845 2.18e-60 2bkb:B, 2bkb:C, 2bkb:D, 1isa:A, 1isa:B, 1isb:A, 1isb:B, 1isc:A, 1isc:B, 2nyb:A, 2nyb:B, 2nyb:C, 2nyb:D, 1za5:A, 1za5:B
25 1qnn:A 191 197 0.4600 0.4817 0.4670 3.53e-60 1qnn:B, 1qnn:C, 1qnn:D, 1uer:A, 1uer:B, 1uer:C, 1uer:D, 1ues:A, 1ues:B, 1ues:C, 1ues:D
26 2w7w:A 193 195 0.4700 0.4870 0.4821 3.91e-59 2w7w:B
27 1my6:A 198 191 0.4600 0.4646 0.4817 1.47e-58 1my6:B
28 3h1s:B 192 200 0.4550 0.4740 0.4550 6.53e-58 3h1s:A
29 2cw2:A 199 189 0.3950 0.3970 0.4180 6.43e-57 2cw2:B
30 7sbh:A 208 202 0.4800 0.4615 0.4752 1.72e-56
31 8avl:A 192 197 0.4400 0.4583 0.4467 6.14e-56 8avl:B, 8avl:C, 8avl:D, 8avl:E, 8avl:F, 8avl:G, 8avl:H, 8avm:A, 8avm:B, 8avm:C, 8avm:D, 8avm:E, 8avm:F
32 3esf:A 197 198 0.4550 0.4619 0.4596 2.30e-55 3esf:B, 3esf:C, 3esf:D
33 1kkc:A 200 206 0.4700 0.4700 0.4563 2.60e-55 1kkc:B, 1kkc:X, 1kkc:Y
34 4c7u:A 203 203 0.4450 0.4384 0.4384 1.16e-54 4c7u:B, 4c7u:C, 4c7u:D, 4c7u:E, 4c7u:F, 4c7u:G, 4c7u:H
35 3dc6:C 198 205 0.4450 0.4495 0.4341 3.45e-54 3dc6:A
36 2gpc:A 194 197 0.4300 0.4433 0.4365 4.05e-54 2gpc:B
37 6cyp:A 211 202 0.4400 0.4171 0.4356 1.70e-52 6cyl:A, 6cyl:B, 6cyl:C, 6cyl:D, 6cyp:B, 6cyp:C, 6cyp:D, 6cyp:E, 6cyp:F, 6cys:A, 6cys:B, 6cys:C, 6cys:D, 6cyx:A, 6cyx:B, 6cyx:C, 6cyx:D, 6cyx:E, 6cyx:F, 6dqy:A, 6dqy:B, 6dqy:C, 6dqy:D, 6dqy:E, 6dqy:F, 6dqy:G, 6dqy:H, 6dqy:I, 6dqy:J, 6dqy:K, 6dqy:L, 6dqy:M, 6dqy:N, 6dqy:O, 6dqy:P, 6dqy:Q, 6dqy:R, 6dqy:S, 6dqy:T, 6dqy:U, 6dqy:V, 6dqy:W, 6dqy:X, 7svs:A, 7svs:B, 7svs:C, 7svs:D, 7svs:E, 7svs:F, 7svs:G, 7svs:H, 5tir:A, 5tir:B, 5tir:C, 5tir:D
38 8bhx:A 203 201 0.4350 0.4286 0.4328 4.72e-51 8bhx:B
39 5ag2:C 195 202 0.4350 0.4462 0.4307 5.43e-51 5ag2:A, 3dc5:A, 3dc5:C, 6elk:A, 6elk:C, 6qzm:A, 6qzm:C, 6qzn:A, 6qzn:C, 6s0d:A, 6s0d:C, 4x9q:A, 4x9q:C
40 4br6:B 197 205 0.4500 0.4569 0.4390 6.09e-51 4br6:A, 4br6:C, 4br6:D
41 4yet:B 200 198 0.4100 0.4100 0.4141 2.57e-50 4yet:A
42 4h3e:A 214 202 0.4150 0.3879 0.4109 3.98e-50 4dvh:A, 4dvh:B, 4h3e:B
43 8r5o:I 215 200 0.4400 0.4093 0.4400 4.52e-50 8qma:G, 8r6s:I, 8ras:I, 8rdj:I
44 1ma1:A 201 203 0.4100 0.4080 0.4039 1.73e-49 1ma1:B, 1ma1:C, 1ma1:D, 1ma1:E, 1ma1:F
45 2bpi:A 197 199 0.3900 0.3959 0.3920 1.87e-49 2bpi:B
46 2a03:A 197 199 0.3950 0.4010 0.3970 5.42e-49 2a03:B, 2goj:A, 2goj:B
47 8wa0:L 235 216 0.4400 0.3745 0.4074 2.20e-48 8w9z:L, 8wa1:L
48 7azq:A 199 197 0.4200 0.4221 0.4264 3.03e-48 7azq:E, 7azr:A, 7azr:E
49 4f2n:B 210 202 0.4000 0.3810 0.3960 2.33e-47 4f2n:A, 4f2n:C, 4f2n:D, 4f2n:E, 4f2n:F, 4f2n:G, 4f2n:H, 4f2n:I, 4f2n:J, 4f2n:K, 4f2n:L
50 4e4e:B 207 203 0.4100 0.3961 0.4039 2.45e-46 3bfr:A, 4e4e:A, 4e4e:C, 4e4e:D, 4f6e:A, 4f6e:B, 4f6e:C, 4f6e:D, 3lsu:A, 3lsu:B, 3lsu:C, 3lsu:D, 3rn4:A
51 8r6s:N 224 216 0.4300 0.3839 0.3981 2.74e-46 7bjk:A, 7bjk:B, 7bjk:C, 7bjk:D, 7bjk:E, 8qma:L, 8r5o:N, 8ras:N, 8rdj:N
52 6j55:L 203 191 0.3800 0.3744 0.3979 9.43e-46 6j55:A, 6j55:B, 6j55:C, 6j55:D, 6j55:E, 6j55:F, 6j55:G, 6j55:H, 6j55:I, 6j55:J, 6j55:K
53 1gn2:A 198 203 0.4150 0.4192 0.4089 5.32e-45 1gn2:B, 1gn2:C, 1gn2:D, 1gn2:E, 1gn2:F, 1gn2:G, 1gn2:H, 1gn3:A, 1gn3:B, 1gn4:A, 1gn4:B, 1gn4:C, 1gn4:D, 1gn6:A, 1gn6:B, 1gn6:C, 1gn6:D, 1ids:A, 1ids:B, 1ids:C, 1ids:D
54 1unf:X 214 213 0.4550 0.4252 0.4272 2.08e-44
55 8w9z:G 218 200 0.4000 0.3670 0.4000 2.18e-44 8wa0:G, 8wa1:G
56 4gun:A 205 205 0.4150 0.4049 0.4049 5.82e-44 4gun:B, 4gun:C, 4gun:D, 4gun:E, 4gun:F, 4gun:G, 4gun:H, 4gun:I, 4gun:J, 4gun:K, 4gun:L, 4gun:M, 4gun:N, 4gun:O, 4gun:P, 3qvn:A
57 1ar4:A 201 203 0.3900 0.3881 0.3842 1.52e-43 1ar4:B, 1ar5:A, 1ar5:B, 1avm:A, 1avm:B, 1bs3:A, 1bs3:B, 1bsm:A, 1bsm:B, 1bt8:A, 1bt8:B
58 3ak3:B 213 207 0.4100 0.3850 0.3961 8.45e-43 3ak2:A, 3ak2:B, 3ak2:C, 3ak2:D, 3ak3:A, 3ak3:C, 3ak3:D
59 3js4:A 207 204 0.4050 0.3913 0.3971 1.79e-42 3js4:B, 3js4:C, 3js4:D
60 3cei:A 213 199 0.3650 0.3427 0.3668 2.90e-40 3cei:B
61 4ffk:A 212 205 0.3900 0.3679 0.3805 1.25e-38
62 3evk:A 211 207 0.3950 0.3744 0.3816 2.99e-37 3evk:B, 3evk:C, 3evk:D
63 1wb7:A 205 203 0.3500 0.3415 0.3448 5.26e-36 1wb7:B, 1wb8:A, 1wb8:B
64 1b06:A 208 203 0.3500 0.3365 0.3448 4.18e-35 1b06:B, 1b06:C, 1b06:D, 1b06:E, 1b06:F
65 2cw3:A 200 198 0.3600 0.3600 0.3636 6.12e-34 2cw3:B
66 1coj:A 211 193 0.3050 0.2891 0.3161 1.56e-21
67 6yw5:44 260 236 0.2550 0.1962 0.2161 1.80e-05 6ywe:44, 6ywx:44, 6ywy:44
68 7pub:Cr 267 68 0.1200 0.0899 0.3529 1.53e-04 6hiv:Cr, 6hiw:Cr, 6hiy:Cr
69 7aor:y 253 84 0.1300 0.1028 0.3095 0.001
70 7bkb:D 549 37 0.0900 0.0328 0.4865 0.012 7bkb:d, 7bkc:D, 7bkc:d, 7bkd:D, 7bke:D
71 8om2:3 257 40 0.0550 0.0428 0.2750 3.9 8d8k:3, 8d8l:3, 5mrc:33, 5mre:33, 5mrf:33, 8om3:3, 8om4:3
72 2oox:E 333 41 0.0750 0.0450 0.3659 4.8 2oox:G, 2ooy:G, 2ooy:E, 2qr1:G, 2qr1:E, 2qrc:G, 2qrc:E, 2qrd:G, 2qrd:E, 2qre:G, 2qre:E
73 8oz7:A 597 26 0.0600 0.0201 0.4615 6.0 8oz7:B, 8oz7:C, 8oz7:D
74 4g10:A 263 37 0.0600 0.0456 0.3243 8.1 4yav:A
75 6ts2:D 1123 50 0.0700 0.0125 0.2800 9.4 6ts2:A, 6ts2:B, 6ts2:C

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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