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BioLiP
>protein
KFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKN

The query sequence (length=56) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7w1m:H 322 56 1.0000 0.1739 1.0000 1.62e-34 5k5h:A, 5k5i:A, 5k5j:A, 5k5l:E, 5k5l:G, 5k5l:F, 5kkq:A, 5kkq:D, 8ssq:A, 8ssq:D, 8ssr:A, 8ssr:D, 8sss:A, 8sss:D, 8sst:A, 8sst:D, 8ssu:A, 5t00:A, 5t00:D, 5t0u:A, 5t0u:D, 5und:A, 5und:B, 5yef:A, 5yef:B, 5yef:G, 5yef:J, 5yeg:A, 5yeg:B, 5yeh:A, 5yeh:B, 5yel:B, 5yel:A
2 7w1m:H 322 51 0.3214 0.0559 0.3529 0.075 5k5h:A, 5k5i:A, 5k5j:A, 5k5l:E, 5k5l:G, 5k5l:F, 5kkq:A, 5kkq:D, 8ssq:A, 8ssq:D, 8ssr:A, 8ssr:D, 8sss:A, 8sss:D, 8sst:A, 8sst:D, 8ssu:A, 5t00:A, 5t00:D, 5t0u:A, 5t0u:D, 5und:A, 5und:B, 5yef:A, 5yef:B, 5yef:G, 5yef:J, 5yeg:A, 5yeg:B, 5yeh:A, 5yeh:B, 5yel:B, 5yel:A
3 7w1m:H 322 51 0.2321 0.0404 0.2549 0.38 5k5h:A, 5k5i:A, 5k5j:A, 5k5l:E, 5k5l:G, 5k5l:F, 5kkq:A, 5kkq:D, 8ssq:A, 8ssq:D, 8ssr:A, 8ssr:D, 8sss:A, 8sss:D, 8sst:A, 8sst:D, 8ssu:A, 5t00:A, 5t00:D, 5t0u:A, 5t0u:D, 5und:A, 5und:B, 5yef:A, 5yef:B, 5yef:G, 5yef:J, 5yeg:A, 5yeg:B, 5yeh:A, 5yeh:B, 5yel:B, 5yel:A
4 7w1m:H 322 53 0.3036 0.0528 0.3208 6.4 5k5h:A, 5k5i:A, 5k5j:A, 5k5l:E, 5k5l:G, 5k5l:F, 5kkq:A, 5kkq:D, 8ssq:A, 8ssq:D, 8ssr:A, 8ssr:D, 8sss:A, 8sss:D, 8sst:A, 8sst:D, 8ssu:A, 5t00:A, 5t00:D, 5t0u:A, 5t0u:D, 5und:A, 5und:B, 5yef:A, 5yef:B, 5yef:G, 5yef:J, 5yeg:A, 5yeg:B, 5yeh:A, 5yeh:B, 5yel:B, 5yel:A
5 2ct1:A 77 27 0.4821 0.3506 1.0000 1.33e-14
6 3w5k:B 110 52 0.3393 0.1727 0.3654 0.007
7 2i13:A 151 53 0.3214 0.1192 0.3396 0.013
8 2i13:A 151 53 0.3214 0.1192 0.3396 0.019
9 2i13:B 144 53 0.3214 0.1250 0.3396 0.016
10 2i13:B 144 53 0.2857 0.1111 0.3019 0.065
11 2lv2:A 85 47 0.3036 0.2000 0.3617 0.028
12 2yu5:A 44 26 0.2143 0.2727 0.4615 0.029
13 2rsi:A 92 50 0.3036 0.1848 0.3400 0.044 2elt:A, 2ruu:A, 2rv7:A
14 2rsi:A 92 22 0.1964 0.1196 0.5000 0.53 2elt:A, 2ruu:A, 2rv7:A
15 8dey:C 57 53 0.3393 0.3333 0.3585 0.047 8dey:F
16 1mey:F 84 54 0.3036 0.2024 0.3148 0.076 1mey:C
17 1mey:F 84 53 0.2857 0.1905 0.3019 0.083 1mey:C
18 2kmk:A 82 56 0.3036 0.2073 0.3036 0.089
19 2emb:A 44 22 0.2143 0.2727 0.5455 0.10
20 1x6h:A 86 51 0.2321 0.1512 0.2549 0.20
21 8e3e:F 121 53 0.3036 0.1405 0.3208 0.23 8e3d:A, 8e3d:B, 8e3d:F, 8e3e:A, 8e3e:B, 7eyi:G, 7eyi:H, 8h9h:G, 7n5s:A, 7n5t:A, 7n5u:A, 7n5v:A, 7n5v:F, 7n5v:B, 7n5w:A
22 1x6e:A 72 55 0.3036 0.2361 0.3091 0.27
23 2dlq:A 124 54 0.3393 0.1532 0.3519 0.29
24 1g2d:C 89 58 0.3393 0.2135 0.3276 0.30 1g2d:F, 1g2f:C, 1g2f:F
25 2rsj:A 92 37 0.2500 0.1522 0.3784 0.33 2els:A, 2rut:A, 2rv6:A
26 2cot:A 77 56 0.3214 0.2338 0.3214 0.57
27 8tho:A 100 51 0.3036 0.1700 0.3333 0.96 8dtn:F, 6ki6:A, 6ki6:B, 8tlo:A, 6u9q:A
28 2emy:A 46 22 0.1607 0.1957 0.4091 1.3 2el5:A
29 2emh:A 46 21 0.1786 0.2174 0.4762 1.3
30 1p7a:A 37 27 0.1964 0.2973 0.4074 1.4 1u85:A, 1u86:A
31 6j0d:A 87 20 0.1786 0.1149 0.5000 1.4
32 2em3:A 46 26 0.1786 0.2174 0.3846 1.5
33 2yso:A 46 26 0.1786 0.2174 0.3846 1.7
34 5wjq:D 281 53 0.3214 0.0641 0.3396 2.0 5v3j:E, 5v3j:F, 5v3m:C
35 5wjq:D 281 53 0.3036 0.0605 0.3208 2.6 5v3j:E, 5v3j:F, 5v3m:C
36 2k7r:A 106 17 0.1786 0.0943 0.5882 2.1
37 1gec:E 216 18 0.1429 0.0370 0.4444 2.3
38 8qbn:Y 119 16 0.1250 0.0588 0.4375 2.7
39 5jc8:D 262 27 0.1964 0.0420 0.4074 2.7
40 2em0:A 46 26 0.1964 0.2391 0.4231 2.7
41 2ema:A 46 22 0.1964 0.2391 0.5000 2.9
42 8gn3:B 60 58 0.3214 0.3000 0.3103 3.0 8gn3:A, 8gn4:A
43 5v3g:D 170 52 0.3036 0.1000 0.3269 3.3 5egb:A, 5eh2:F, 5eh2:E, 5ei9:E, 5ei9:F, 5v3g:A
44 5v3g:D 170 51 0.2857 0.0941 0.3137 5.9 5egb:A, 5eh2:F, 5eh2:E, 5ei9:E, 5ei9:F, 5v3g:A
45 5v3g:D 170 51 0.2857 0.0941 0.3137 7.0 5egb:A, 5eh2:F, 5eh2:E, 5ei9:E, 5ei9:F, 5v3g:A
46 2yte:A 42 21 0.1607 0.2143 0.4286 3.9
47 2emk:A 46 24 0.1607 0.1957 0.3750 4.9
48 7y9p:A 357 23 0.1786 0.0280 0.4348 5.1
49 8e1h:A 332 39 0.2679 0.0452 0.3846 6.0 8e1i:A, 8e1j:A, 8e1j:B, 8e1s:A, 8e1s:B, 8e1t:A, 8e1t:B, 8e1v:A
50 8wfx:M 296 26 0.1786 0.0338 0.3846 6.6
51 2ma7:A 73 54 0.3036 0.2329 0.3148 6.6
52 7mop:A 2445 15 0.1250 0.0029 0.4667 7.0 6fyh:A, 6pfl:A, 6pfl:B, 8r7o:A, 8r7o:C, 8rd0:C, 8rd0:D, 8rd1:A, 8rd1:C, 8rd1:D, 8rd7:D, 6xz1:A
53 7lui:A 180 30 0.2321 0.0722 0.4333 7.3
54 2dmd:A 96 53 0.3036 0.1771 0.3208 7.6
55 2eow:A 46 28 0.1786 0.2174 0.3571 8.3
56 2ytf:A 46 22 0.1429 0.1739 0.3636 8.6 2eof:A
57 2eoj:A 44 24 0.1607 0.2045 0.3750 8.7
58 2ebt:A 100 50 0.2857 0.1600 0.3200 9.1
59 2ytg:A 46 22 0.1607 0.1957 0.4091 9.3
60 4is1:D 54 51 0.2321 0.2407 0.2549 9.4 4f2j:C, 4is1:C, 3uk3:C, 3uk3:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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