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BioLiP
>protein
KERACRHCHYITTEDRCPVCGSRDLSDDWFDLVIVLDVESRIAKKLRESIPEAAKVPGKYAIRVR

The query sequence (length=65) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 9bct:I 65 65 1.0000 1.0000 1.0000 3.46e-43
2 1ryq:A 64 65 0.7538 0.7656 0.7538 2.30e-29 8oki:I, 8p2i:I, 3p8b:A, 3p8b:C, 3qqc:E
3 4zn3:B 67 64 0.4000 0.3881 0.4062 2.15e-08 3lpe:B, 3lpe:D, 3lpe:F, 3lpe:H, 4zn1:B
4 7fse:A 1040 27 0.2154 0.0135 0.5185 0.003 8ofb:A, 3oiy:A, 3p4x:A
5 4ddt:A 1102 27 0.2154 0.0127 0.5185 0.003 4ddu:A, 4ddv:A, 4ddv:B, 4ddw:A, 4ddx:A, 4ddx:B, 7fsf:A
6 7dvq:6 105 54 0.2308 0.1429 0.2778 0.16 7abg:y, 7abh:y, 7abi:y, 7b0i:D, 7b91:D, 7b92:D, 7b9c:D, 8ch6:D, 6en4:D, 7evn:D, 7evo:6, 6ff4:y, 8hk1:6, 8i0p:7, 8i0r:7, 8i0s:7, 8i0t:7, 8i0u:7, 8i0v:7, 5ife:D, 7omf:D, 7onb:D, 7opi:D, 7q3l:G, 7q4o:G, 7q4p:G, 7qtt:D, 6qx9:BP, 8r08:BP, 5syb:A, 5syb:B, 7vpx:6, 6y50:y, 8y7e:6, 5z56:6, 5z57:6, 5z58:6, 5zya:D
7 6knb:B 1120 19 0.1385 0.0080 0.4737 0.94 6knc:B
8 8ouw:K 656 30 0.1846 0.0183 0.4000 0.99
9 5zvq:A 194 22 0.1385 0.0464 0.4091 1.4 8ab0:F, 8ab0:E, 8bpr:E, 8bpr:F
10 3oha:A 516 30 0.1846 0.0233 0.4000 2.1 3mfh:A, 3mfi:A, 3ohb:A, 2r8j:A, 2r8j:B, 2r8k:A, 2r8k:B, 5vtp:A, 2wtf:A, 2wtf:B, 2xgp:A, 2xgp:B, 2xgq:A, 2xgq:B
11 1s0u:A 391 18 0.1385 0.0230 0.5000 2.4
12 8v6g:A 1050 48 0.2615 0.0162 0.3542 2.7 8v6h:A, 8v6i:A, 8v6j:A
13 8g99:A 1063 48 0.2615 0.0160 0.3542 2.7 8g9f:A, 8g9l:A, 8g9n:A, 8g9o:A, 8ucu:A, 8ucv:A, 8ucw:A, 8v5m:A, 8v5n:A, 8v5o:A
14 5z2v:B 197 17 0.1077 0.0355 0.4118 3.1 5z2v:A
15 6sc6:A 365 42 0.2615 0.0466 0.4048 3.2 5edv:A, 5edv:B, 6gzy:A, 6gzy:B, 6kc5:B, 6kc6:A, 6kc6:C, 6kc6:E, 6kc6:G, 6kc6:I, 6kc6:K, 4ljo:A, 4ljp:A, 4ljq:B, 4ljq:C, 4ljq:A, 4ljq:D, 6sc5:A, 6sc7:A, 6sc8:A, 6sc9:A, 7v8f:B, 7v8g:D, 7v8g:C
16 8ab0:D 157 22 0.1385 0.0573 0.4091 3.6 8bpr:D
17 3myr:D 561 35 0.2000 0.0232 0.3714 3.8 3myr:B, 3myr:F, 3myr:H
18 8a5q:W 433 22 0.1385 0.0208 0.4091 4.6 8a5d:W, 8a5p:W
19 8d4a:A 1207 43 0.1846 0.0099 0.2791 5.1 8d4b:A
20 5ijl:A 943 19 0.1231 0.0085 0.4211 5.4
21 8ppt:B 1191 19 0.1231 0.0067 0.4211 6.0 8ppu:B, 8ppv:B, 6t8h:B
22 8d0b:F 915 15 0.1077 0.0077 0.4667 6.1 8d0k:F
23 7opl:A 1070 15 0.1077 0.0065 0.4667 6.1 6as7:A, 9c8v:C, 8d96:C, 8d9d:C, 5exr:C, 5exr:G, 5iud:A, 5iud:D, 5iud:G, 5iud:J, 7n2m:A, 4q5v:A, 4q5v:E, 4qcl:A, 8qj7:A, 7u5c:C, 8vy3:C, 4y97:B, 4y97:D, 4y97:F, 4y97:H
24 2aus:D 53 21 0.1385 0.1698 0.4286 6.4 2aus:B, 2ey4:E, 2ey4:F, 3hax:C, 3hay:C, 3hjw:B, 2hvy:C, 3lwo:B, 3lwp:B, 3lwq:B, 3lwr:B, 3lwv:B, 2rfk:B
25 8pey:I 380 26 0.1385 0.0237 0.3462 6.5
26 8peu:A 419 26 0.1385 0.0215 0.3462 6.6 1a8v:A, 1a8v:B, 2a8v:A, 2a8v:B, 7adb:a, 7adb:b, 7adb:c, 7adb:d, 7adb:e, 7adb:f, 7adc:a, 7adc:b, 7adc:f, 7adc:c, 7adc:d, 7adc:e, 7add:a, 7add:f, 7add:b, 7add:c, 7add:d, 7add:e, 7ade:a, 7ade:f, 7ade:b, 7ade:c, 7ade:d, 7ade:e, 6duq:A, 6duq:B, 6duq:F, 6duq:E, 6duq:L, 6duq:G, 6duq:H, 6duq:K, 6duq:C, 6duq:I, 6duq:D, 6duq:J, 8e3h:e, 8e3h:f, 8e3h:c, 8e3h:b, 8e3h:a, 8e3h:d, 8e5l:e, 8e5l:f, 8e5l:c, 8e5l:b, 8e5l:a, 8e5l:d, 8e5p:e, 8e5p:f, 8e5p:c, 8e5p:b, 8e5p:a, 8e5p:d, 8e6w:e, 8e6w:f, 8e6w:c, 8e6w:b, 8e6w:a, 8e6w:d, 8e70:e, 8e70:f, 8e70:c, 8e70:b, 8e70:a, 8e70:d, 2ht1:B, 2ht1:A, 3ice:A, 3ice:B, 3ice:C, 3ice:D, 3ice:E, 3ice:F, 5jji:A, 5jji:B, 5jji:C, 5jji:D, 5jji:E, 5jji:F, 5jjk:A, 5jjk:B, 5jjk:C, 5jjk:D, 5jjk:E, 5jjk:F, 5jjl:A, 5jjl:B, 5jjl:C, 5jjl:D, 5jjl:E, 5jjl:F, 8peu:B, 8peu:C, 8peu:D, 8peu:E, 8peu:F, 8peu:I, 8peu:J, 8peu:K, 8peu:L, 8peu:M, 8pew:A, 8pew:B, 8pew:C, 8pew:D, 8pew:E, 8pew:F, 8pew:G, 8pew:H, 8pew:I, 8pew:J, 8pew:K, 8pew:L, 8pew:M, 8pew:N, 8pew:O, 8pew:P, 8pex:A, 8pex:B, 8pex:C, 8pex:D, 8pex:E, 8pex:F, 8pex:I, 8pex:J, 8pex:K, 8pex:L, 8pex:M, 8pex:N, 8pey:B, 8pey:C, 8pey:D, 8pey:E, 8pey:F, 8pey:G, 8pey:A, 8pey:J, 8pey:K, 8pey:L, 8pey:M, 8pey:N, 8ptg:A, 8ptg:B, 8ptg:C, 8ptg:D, 8ptg:E, 8ptg:F, 8ptm:C, 8ptm:D, 8ptm:E, 8pto:B, 8pto:C, 8pto:D, 1pv4:A, 1pv4:C, 1pv4:D, 1pv4:E, 1pv4:F, 1pvo:A, 1pvo:C, 1pvo:D, 1pvo:E, 1pvo:F, 1pvo:B, 8q3n:A, 8q3n:B, 8q3n:C, 8q3n:D, 8q3n:E, 8q3n:F, 8q3o:A, 8q3o:B, 8q3o:C, 8q3o:D, 8q3o:E, 8q3p:a, 8q3p:r, 8q3p:q, 8q3p:p, 8q3p:o, 8q3p:n, 8q3p:m, 8q3p:l, 8q3p:k, 8q3p:j, 8q3p:i, 8q3p:b, 8q3p:c, 8q3p:d, 8q3p:e, 8q3p:f, 8q3p:g, 8q3p:h, 8q3q:a, 8q3q:r, 8q3q:q, 8q3q:p, 8q3q:o, 8q3q:n, 8q3q:m, 8q3q:l, 8q3q:k, 8q3q:j, 8q3q:i, 8q3q:h, 8q3q:g, 8q3q:f, 8q3q:e, 8q3q:d, 8q3q:c, 8q3q:b, 6wa8:A, 6wa8:B, 6wa8:C, 6wa8:D, 6wa8:E, 6wa8:F, 6xas:B, 6xas:C, 6xas:D, 6xas:E, 6xas:F, 6xav:B, 1xpo:A, 1xpo:B, 1xpo:C, 1xpo:D, 1xpo:E, 1xpo:F, 1xpr:A, 1xpr:B, 1xpr:C, 1xpr:D, 1xpr:E, 1xpr:F, 1xpu:A, 1xpu:B, 1xpu:C, 1xpu:D, 1xpu:E, 1xpu:F, 6z9p:a, 6z9p:b, 6z9p:c, 6z9p:d, 6z9p:e, 6z9p:f, 6z9q:a, 6z9q:f, 6z9q:b, 6z9q:c, 6z9q:d, 6z9q:e, 6z9r:a, 6z9r:f, 6z9r:b, 6z9r:c, 6z9r:d, 6z9r:e, 6z9s:a, 6z9s:f, 6z9s:b, 6z9s:c, 6z9s:d, 6z9s:e, 6z9t:a, 6z9t:f, 6z9t:b, 6z9t:c, 6z9t:d, 6z9t:e
27 7vw7:B 593 32 0.1846 0.0202 0.3750 6.7 7coq:C, 7dqd:B, 7dqd:C, 7dqd:J, 7dqd:K, 7dqe:A, 7dqe:B, 7dqe:C, 8igv:A, 8igv:B, 8igv:C, 8igw:A, 8igw:B, 8igw:C, 8igw:G, 8igw:H, 8igw:I, 5knb:B, 5knb:C, 5knc:A, 5knc:B, 5knc:C, 3vr3:B, 3vr3:C, 3vr6:B, 3vr6:C, 7vw7:C, 5ze9:A, 5ze9:B, 5ze9:C
28 6btm:B 948 18 0.1077 0.0074 0.3889 7.1
29 4u3e:A 637 34 0.2000 0.0204 0.3824 7.3 4coi:A, 4coi:B, 4coj:A, 4coj:B, 4col:A, 4col:B, 4com:A, 4com:B, 4u3e:B
30 1i7h:A 109 47 0.2462 0.1468 0.3404 8.5 1i7h:B, 1i7h:C
31 4ffk:A 212 20 0.1538 0.0472 0.5000 8.9

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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