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BioLiP
>protein
IVYGDYNNDGNVDALDFAGLKKYIMAAYVKNLDVNLDNEVNSTDLAILKKYLLGM

The query sequence (length=55) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 2vn6:B 64 58 0.9273 0.7969 0.8793 7.68e-28 2vn5:B, 2vn5:D
2 1daq:A 71 56 0.4727 0.3662 0.4643 7.41e-11 1dav:A, 2mte:A
3 4fl4:A 68 58 0.4545 0.3676 0.4310 2.62e-09 4fl4:D, 4fl4:G, 4fl4:J
4 3ul4:B 63 60 0.4727 0.4127 0.4333 3.89e-05
5 5nrk:B 68 60 0.3818 0.3088 0.3500 4.49e-05 5nrk:D, 5nrm:B
6 5nrk:B 68 30 0.2000 0.1618 0.3667 1.1 5nrk:D, 5nrm:B
7 2ccl:B 62 59 0.3091 0.2742 0.2881 4.33e-04 2ccl:D, 1ohz:B
8 8x3a:A 151 56 0.4182 0.1523 0.4107 8.25e-04 8x39:A, 8x39:B
9 8x3a:A 151 59 0.3091 0.1126 0.2881 6.1 8x39:A, 8x39:B
10 4dh2:B 72 62 0.4364 0.3333 0.3871 0.001 4dh2:D
11 5lxv:B 65 57 0.3455 0.2923 0.3333 0.001 5lxv:D
12 6kg9:A 67 56 0.3455 0.2836 0.3393 0.027 6kgc:B, 6kgd:B, 6kge:D, 6kge:B, 6kgf:D, 6kgf:B
13 2ozn:B 131 50 0.2545 0.1069 0.2800 0.14
14 6s7o:A 656 30 0.1818 0.0152 0.3333 0.60 6ftg:5, 6fti:5, 6ftj:5, 8pn9:A
15 4fl4:I 309 54 0.2909 0.0518 0.2963 0.81 2b59:B, 4fl4:C, 4fl4:F, 4fl4:L, 5g5d:B, 3kcp:A
16 2y3n:B 60 49 0.3091 0.2833 0.3469 2.7
17 6rb7:A 305 33 0.2182 0.0393 0.3636 2.8 6rb7:B, 6rb7:E, 6rb7:F, 6rd1:A, 6rd1:B
18 5m0y:B 157 25 0.1818 0.0637 0.4000 4.2 5k39:B
19 3bq5:A 709 35 0.2000 0.0155 0.3143 4.3
20 1t7l:A 734 35 0.2000 0.0150 0.3143 4.3 3bq5:B, 3bq6:A, 3bq6:B, 1t7l:B, 1xdj:A, 1xdj:B, 1xpg:A, 1xpg:B, 1xr2:A, 1xr2:B
21 7yca:3 227 20 0.1818 0.0441 0.5000 5.8
22 5n5p:B 87 20 0.1818 0.1149 0.5000 6.4 5n5p:D
23 7d18:A 293 24 0.1455 0.0273 0.3333 7.4

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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