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BioLiP
>protein
ISPQARAFLEEVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMRS

The query sequence (length=49) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1le8:A 53 49 0.9796 0.9057 0.9796 3.58e-30 1akh:A, 1yrn:A
2 1nk2:P 77 41 0.3265 0.2078 0.3902 9.10e-06 1nk3:P
3 4rdu:D 62 40 0.3469 0.2742 0.4250 3.74e-05 4rdu:A, 4xrs:I, 4xrs:G
4 1lfu:P 82 48 0.4694 0.2805 0.4792 4.15e-05 1b72:B, 1b8i:B, 4cyc:B, 1puf:B, 2r5y:B, 2r5z:B, 4uus:B, 4uus:F, 5zjq:B, 5zjr:B, 5zjs:B, 5zjt:B
5 1ig7:A 58 41 0.3265 0.2759 0.3902 4.20e-05
6 3rkq:A 58 47 0.3265 0.2759 0.3404 1.54e-04 3rkq:B
7 1fjl:A 65 40 0.3061 0.2308 0.3750 1.99e-04 1fjl:B, 1fjl:C
8 5flv:M 229 47 0.3265 0.0699 0.3404 3.85e-04 5flv:A, 5flv:E, 5flv:I, 4s0h:A, 4s0h:B, 4s0h:E, 4s0h:F, 6wc2:N, 6wc2:M, 6wc2:O, 6wc5:I, 6wc5:N, 2x6u:A, 2x6v:A, 2x6v:B
9 3a01:F 61 38 0.3061 0.2459 0.3947 6.91e-04 3a01:B, 3lnq:A
10 4egc:A 539 45 0.3265 0.0297 0.3556 7.91e-04
11 3cmy:A 60 40 0.3061 0.2500 0.3750 0.001
12 3a01:A 78 42 0.3061 0.1923 0.3571 0.003 3a01:E
13 2lkx:A 68 38 0.3061 0.2206 0.3947 0.003
14 4rbo:A 55 41 0.2653 0.2364 0.3171 0.003 4rbo:D
15 4xrm:B 64 27 0.2653 0.2031 0.4815 0.003 5bng:B, 5bng:A, 5eg0:A, 5ego:A, 8vts:B, 8vts:D, 8vtt:D, 4xrm:A, 4xrs:A, 4xrs:B
16 8pna:A 67 40 0.2449 0.1791 0.3000 0.004 8pm5:A, 8pm5:D, 8pm5:G, 8pm5:M, 8pm5:J, 8pm7:A, 8pm7:C, 8pm7:E, 8pm7:G, 8pmc:A, 8pmc:C, 8pmc:E, 8pmc:G, 8pmf:A, 8pmn:A, 8pmv:A, 8pmv:D, 8pmv:G, 8pmv:J, 8pn4:A, 8pn4:D, 8pn4:G, 8pn4:M, 8pn4:J, 8pnc:A, 8pnc:K, 8pnc:E, 8pnc:H
17 4uus:A 67 40 0.2653 0.1940 0.3250 0.004 4uus:E
18 6es3:K 72 45 0.2857 0.1944 0.3111 0.007 6es2:K, 6es2:L, 6es3:M, 5lty:K, 5lty:M, 5lux:K, 5lux:L, 7q3o:K, 7q3o:C, 7q3o:E, 7q3o:G, 7q4n:K, 7q4n:C
19 2me6:A 71 40 0.2653 0.1831 0.3250 0.009
20 2r5z:A 75 40 0.2653 0.1733 0.3250 0.009 9ant:A, 9ant:B, 5jlw:A, 5jlw:D, 5jlx:A, 5jlx:D, 2r5y:A, 4xic:A, 4xic:D, 4xid:A, 4xid:D
21 8osb:E 62 38 0.2653 0.2097 0.3421 0.009
22 4cyc:A 66 40 0.2653 0.1970 0.3250 0.009 1b8i:A
23 1ahd:P 68 40 0.2653 0.1912 0.3250 0.009
24 3kxa:A 131 35 0.2653 0.0992 0.3714 0.010 3kxa:B, 3kxa:C, 3kxa:D
25 1puf:A 77 40 0.3061 0.1948 0.3750 0.012 2lp0:A
26 5zjr:A 64 24 0.2041 0.1562 0.4167 0.049 5zjq:A, 5zjs:A, 5zjt:A, 5zjt:E
27 1zq3:P 68 42 0.2653 0.1912 0.3095 0.068
28 1b72:A 68 40 0.2653 0.1912 0.3250 0.069
29 6e8c:A 135 42 0.2449 0.0889 0.2857 0.12 6a8r:A, 6a8r:B, 6dfy:C, 6dfy:D, 7dw5:A, 7dw5:B, 6u81:A, 6u82:A, 6u82:D, 5z2t:C, 5z2t:D, 5z6z:A, 5zfw:A, 5zfy:A, 5zfz:A
30 6e8c:A 135 47 0.2857 0.1037 0.2979 0.74 6a8r:A, 6a8r:B, 6dfy:C, 6dfy:D, 7dw5:A, 7dw5:B, 6u81:A, 6u82:A, 6u82:D, 5z2t:C, 5z2t:D, 5z6z:A, 5zfw:A, 5zfy:A, 5zfz:A
31 9b8u:B 66 36 0.2857 0.2121 0.3889 0.18 9b8u:A, 9b8u:C, 9b8u:D
32 5wc9:A 136 48 0.3469 0.1250 0.3542 0.21 1au7:A, 1au7:B, 5wc9:B, 5wc9:E, 5wc9:F
33 3d1n:I 150 46 0.3265 0.1067 0.3478 0.25 3d1n:K, 3d1n:J, 3d1n:L, 3d1n:M, 3d1n:N, 3d1n:O, 3d1n:P
34 4qtr:C 57 48 0.2245 0.1930 0.2292 0.25 4qtr:A, 4qtr:B, 4qtr:D
35 8g8e:X 140 49 0.2857 0.1000 0.2857 0.39 8g87:X, 8g88:X, 8g8b:X, 8g8g:X, 8sps:M, 7u0g:K
36 4j19:A 77 55 0.3061 0.1948 0.2727 0.41 4j19:B
37 1gt0:C 137 48 0.3061 0.1095 0.3125 0.44 1cqt:A, 1cqt:B, 1e3o:C, 1hf0:A, 1hf0:B, 1o4x:A, 1oct:C
38 8eml:A 58 40 0.2449 0.2069 0.3000 0.70 8eml:B
39 8r8r:A 1188 25 0.2245 0.0093 0.4400 0.89
40 3a4w:A 301 28 0.2653 0.0432 0.4643 1.0 3a4w:B, 3a4x:A, 3a4x:B, 3afb:A, 3afb:B
41 1jgg:A 57 41 0.2245 0.1930 0.2683 1.0 1jgg:B
42 8emt:B 1221 15 0.1837 0.0074 0.6000 1.0
43 8emt:A 1254 15 0.1837 0.0072 0.6000 1.1
44 7orc:B 1299 15 0.1837 0.0069 0.6000 1.1 5epg:A, 7opn:A, 7opn:B, 7orc:A, 6q6q:A, 4uhw:A, 4uhx:A
45 6fqp:A 67 27 0.2245 0.1642 0.4074 1.3 6fqp:B, 6fqq:A, 6fqq:B, 6fqq:D, 6fqq:E
46 3l1p:A 147 49 0.2857 0.0952 0.2857 1.4 8bx2:A, 6ht5:E, 3l1p:B, 8sps:L, 8spu:L, 6t90:K, 7u0g:M, 7u0g:L, 7u0i:L, 7u0i:M
47 2x77:A 181 43 0.2653 0.0718 0.3023 1.4 2x77:B
48 8bx1:A 127 41 0.2449 0.0945 0.2927 1.5
49 2hk6:A 309 26 0.2245 0.0356 0.4231 1.7 1c1h:A, 1c9e:A, 1ld3:A, 3m4z:A, 2q2n:A, 2q2o:A, 2q3j:A
50 2h1k:B 60 23 0.1633 0.1333 0.3478 2.0 2h1k:A
51 5c1z:A 384 26 0.2449 0.0312 0.4615 2.1 4bm9:A, 5c1z:B, 5c23:A, 5c23:B, 5c9v:A, 6glc:A, 6hue:A, 6hue:B, 4i1f:A, 4i1h:A, 8ik6:C, 8ikm:A, 8ikt:A, 8ikv:C, 8ikv:A, 8jwv:A, 5n2w:A, 5n38:A, 8wzn:A, 8wzo:A
52 3lvq:E 420 33 0.2041 0.0238 0.3030 3.0 2b0o:E, 2b0o:F, 2b0o:G, 2b0o:H, 3lvr:E
53 6sg9:F4 541 17 0.1224 0.0111 0.3529 4.3 6sgb:F4
54 2zue:A 628 34 0.2653 0.0207 0.3824 5.2 2zuf:A
55 8byk:A 437 23 0.1837 0.0206 0.3913 5.4
56 7pd1:B 367 19 0.1837 0.0245 0.4737 7.0 7pd1:A, 7pd2:A, 7pd2:B
57 3kff:A 152 23 0.2245 0.0724 0.4783 7.1 3kfg:A, 3kfh:A, 3kfi:A
58 6bbp:A 520 33 0.2041 0.0192 0.3030 7.5 2a5d:A, 2a5f:A, 2a5g:A, 6bbq:A, 1e0s:A, 1fgy:A, 1fhw:A, 1fhw:B, 1fhx:A, 1fhx:B, 4fme:C, 4fme:F, 2j5x:A, 2j5x:B, 4kax:A, 4kax:B, 3n5c:A, 3n5c:B, 3pcr:B, 2r09:A, 2r09:B, 2r0d:A, 2r0d:B, 3vhx:A, 3vhx:C, 3vhx:E, 3vhx:G, 2w83:A, 2w83:B, 2w83:E, 7xrd:A, 7xrd:B, 7xrd:C, 7xrd:D
59 4zyn:B 385 26 0.2245 0.0286 0.4231 8.7 4k7d:A, 4k7d:B, 4k7d:C, 4k95:A, 4k95:B, 4k95:C, 4k95:D, 4k95:E, 4k95:F, 4k95:G, 4k95:H, 4k95:I, 4k95:J, 4k95:K, 4k95:L, 7us1:A, 8w31:A, 4zyn:A
60 8ik5:C 67 25 0.2041 0.1493 0.4000 9.0 8ike:C, 8ilw:C
61 6h9s:B 292 19 0.1224 0.0205 0.3158 9.8 6h9s:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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