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BioLiP
>protein
ISDSISKRRSIRKYKNQSISHETIEKIIEAGINAPSSKNRQPWRFVVITEKEKESMLKAMSKGIQNEINDNGLLPGSRQH
IAGANYTVEIMKQAPVTIFILNILGKSPLEKLSPEERFYEMANMQSIGAAIQNMSLTAVELGLGSLWICDVYFAYRELCE
WLNTDSQLVAAISLGYPDEEPSRRPRLQLSDVTEWR

The query sequence (length=196) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3gfa:A 197 196 1.0000 0.9949 1.0000 3.66e-146 3gfa:B
2 3eo8:A 219 208 0.3673 0.3288 0.3462 1.62e-25 3eo8:B, 3eo8:C, 3eo8:D, 3eo8:E, 3eo8:F
3 3e39:A 175 191 0.3061 0.3429 0.3141 1.12e-16 3e39:B
4 4dn2:A 191 196 0.2755 0.2827 0.2755 1.76e-15 4dn2:B
5 3m5k:A 168 181 0.2551 0.2976 0.2762 3.30e-14 3m5k:B
6 5j6c:A 173 185 0.2959 0.3353 0.3135 3.36e-13 5j6c:B
7 4g8s:A 182 197 0.2653 0.2857 0.2640 3.75e-13 4g8s:B
8 3ge5:A 176 193 0.2857 0.3182 0.2902 3.31e-12 3ge5:B
9 3kwk:A 168 191 0.2602 0.3036 0.2670 4.48e-12
10 3e10:B 167 180 0.2755 0.3234 0.3000 4.56e-11 3e10:A
11 5uu6:C 236 188 0.2449 0.2034 0.2553 9.63e-11 5uu6:A, 5uu6:B, 5uu6:D
12 4xoq:A 204 189 0.2347 0.2255 0.2434 1.40e-10 4xoo:A, 4xoo:B, 4xoo:C, 4xoo:D, 4xoq:B, 4xoq:C, 4xoq:D
13 6pz0:A 185 192 0.2449 0.2595 0.2500 1.51e-10 6pz0:B, 6q1b:A, 6q1b:B, 6q1l:A, 6q1l:B, 6tyk:A, 6tyk:B
14 4eo3:A 321 207 0.2806 0.1713 0.2657 2.20e-10 4eo3:B
15 3ek3:A 187 148 0.2092 0.2193 0.2770 3.78e-10
16 3koq:A 173 198 0.2653 0.3006 0.2626 1.72e-09 3h4o:A, 3koq:B, 3koq:C, 3koq:D
17 8cqt:B 164 182 0.2551 0.3049 0.2747 1.80e-09 8cqt:A
18 7dp0:A 223 220 0.2908 0.2556 0.2591 1.92e-09 7dp0:B, 7dp1:A, 7dp1:B, 7dp2:A, 7dp2:B
19 1bkj:A 230 189 0.2398 0.2043 0.2487 5.46e-09 1bkj:B, 2bkj:A, 2bkj:B
20 3ge6:A 210 65 0.1429 0.1333 0.4308 1.34e-08 3ge6:B
21 1zch:A 249 194 0.2398 0.1888 0.2423 1.46e-08
22 3gr3:A 226 198 0.2551 0.2212 0.2525 1.55e-08 3gr3:B
23 5hdj:B 248 194 0.2347 0.1855 0.2371 2.12e-08 5hdj:A
24 1nox:A 200 57 0.1122 0.1100 0.3860 3.42e-08
25 7s14:B 223 210 0.2653 0.2332 0.2476 4.60e-08 7ldq:A, 7rzl:A, 7rzl:B, 7rzp:A, 7rzp:B, 7s14:A, 7s14:C, 7s14:D, 7s1a:A, 7s1a:B, 7t2z:A, 7t2z:B, 7t33:A, 7t33:B
26 2isj:A 219 213 0.2806 0.2511 0.2582 7.19e-08 2isj:B, 2isj:C, 2isj:D, 2isj:E, 2isj:F, 2isj:G, 2isj:H, 2isk:A, 2isk:B, 2isk:C, 2isk:D, 2isk:E, 2isk:F, 2isk:G, 2isk:H, 2isl:A, 2isl:B, 2isl:C, 2isl:D, 2isl:E, 2isl:F, 2isl:G, 2isl:H
27 7tmf:B 183 193 0.2500 0.2678 0.2539 1.03e-07 7tmf:A, 7tmg:A, 7tmg:B
28 5j62:B 209 147 0.2194 0.2057 0.2925 1.65e-07 5j62:A
29 5ko7:B 200 54 0.0918 0.0900 0.3333 3.20e-07
30 5ko8:B 218 54 0.0918 0.0826 0.3333 3.68e-07 5ko7:A, 5ko8:A, 5krd:A, 5krd:B
31 7jh4:A 223 222 0.2704 0.2377 0.2387 4.72e-07 7jh4:B, 7jh4:C, 7jh4:D, 7jh4:E
32 3bm1:A 177 140 0.1735 0.1921 0.2429 4.78e-07 3bm1:B
33 1ywq:A 199 210 0.2602 0.2563 0.2429 5.37e-07
34 8uc3:A 180 60 0.0969 0.1056 0.3167 5.45e-07 8uc3:B
35 3k6h:A 191 184 0.2296 0.2356 0.2446 9.31e-07 3k6h:B
36 8qyg:B 225 217 0.2653 0.2311 0.2396 9.56e-07 8q5g:A, 8q5g:B, 8qyg:A
37 3n2s:A 248 187 0.2143 0.1694 0.2246 2.39e-06 3n2s:B, 3n2s:C, 3n2s:D
38 3gb5:A 185 48 0.0918 0.0973 0.3750 6.05e-06 3to0:A, 3to0:B
39 2b67:A 201 207 0.2653 0.2587 0.2512 6.16e-06 2b67:B, 2b67:C, 2b67:D
40 3tnz:A 222 54 0.0918 0.0811 0.3333 2.54e-05 3gfd:A, 3gfd:B, 3gh8:A, 3gh8:B, 3gh8:C, 3gh8:D, 3gh8:E, 3gh8:F, 3gh8:G, 3gh8:H, 3tnz:B
41 4ttb:A 189 48 0.0867 0.0899 0.3542 2.70e-05 4ttb:B
42 2wzv:B 223 56 0.0816 0.0717 0.2857 2.75e-05 2wzv:A, 2wzw:A, 2wzw:B
43 5hei:A 246 186 0.2296 0.1829 0.2419 3.31e-05 5hei:B, 5hei:C, 5hei:D, 5hei:E, 5hei:F, 5hei:G, 5hei:H
44 6wt2:A 221 67 0.1122 0.0995 0.3284 4.34e-05 6wt2:B, 6wt2:C, 6wt2:D
45 4ttc:A 220 48 0.0867 0.0773 0.3542 4.48e-05 4ttc:B, 4ttc:C, 4ttc:D, 4ttc:E, 4ttc:F, 5yak:A, 5yak:F, 5yak:B, 5yak:C, 5yak:D, 5yak:E
46 2hay:D 222 68 0.1122 0.0991 0.3235 7.20e-05 2hay:A, 2hay:B, 2hay:C
47 3gag:A 206 58 0.0969 0.0922 0.3276 9.11e-05 3gag:B, 3gag:C, 3gag:D
48 2i7h:A 187 197 0.2092 0.2193 0.2081 9.33e-05 2i7h:B, 2i7h:C, 2i7h:D
49 4qlx:A 217 59 0.0969 0.0876 0.3220 9.87e-05 4qlx:B, 4qly:A, 4qly:B, 4qly:C, 4qly:D
50 8dil:A 175 141 0.1633 0.1829 0.2270 1.12e-04 8dil:B, 8dil:C, 8dil:D, 8dil:E, 8dil:F
51 3pxv:B 189 48 0.1173 0.1217 0.4792 3.57e-04 3pxv:A, 3pxv:C, 3pxv:D
52 3eof:A 248 200 0.2041 0.1613 0.2000 4.56e-04 3eof:B
53 3gbh:B 213 55 0.0969 0.0892 0.3455 5.65e-04 3gbh:A, 3gbh:C, 3gbh:D
54 3qdl:A 178 58 0.0969 0.1067 0.3276 0.001 3qdl:B, 3qdl:C, 3qdl:D
55 2fre:A 200 39 0.0816 0.0800 0.4103 0.006 2fre:B
56 5j8d:A 216 58 0.0918 0.0833 0.3103 0.034 5j8d:B, 5j8d:C, 5j8d:D, 5j8g:A, 5j8g:B, 5j8g:C, 5j8g:D, 1kqb:A, 1kqb:B, 1kqb:C, 1kqb:D, 1kqc:A, 1kqc:B, 1kqc:C, 1kqc:D, 1kqd:A, 1kqd:B, 1kqd:C, 1kqd:D, 1nec:A, 1nec:B, 1nec:C, 1nec:D
57 2r01:A 195 46 0.0714 0.0718 0.3043 0.059
58 1ds7:A 217 58 0.0867 0.0783 0.2931 0.13 8c5e:A, 8c5e:B, 8c5f:A, 8c5f:B, 8c5p:A, 8c5p:B, 8ccv:A, 8ccv:B, 8cj0:A, 8cj0:B, 1ds7:B, 1icr:A, 1icr:B, 1icu:A, 1icu:B, 1icu:C, 1icu:D, 1icv:A, 1icv:B, 1icv:C, 1icv:D, 1idt:A, 1idt:B, 8og3:A, 8og3:B, 1oo5:A, 1oo5:B, 1oo6:A, 1oo6:B, 1oon:A, 1oon:B, 1ooq:A, 1ooq:B, 8qes:A, 8qes:C, 8qes:B, 8qes:D, 8qpo:A, 8qpo:B, 8qpo:C, 8qpo:G, 8qpo:D, 8qpo:E, 8qpo:F, 8qpo:H, 3x21:A, 3x21:B, 3x21:C, 3x21:D, 3x21:E, 3x21:F, 3x21:G, 3x21:H, 3x21:I, 3x21:J, 3x22:A, 3x22:B, 7x32:A, 7x32:C, 7x32:B, 7x32:H, 7x32:D, 7x32:F, 7x32:E, 7x32:G, 7xww:B, 7xww:A, 7xww:H, 7xww:I, 1yki:A, 1yki:B, 1yki:C, 1yki:D, 1ylr:A, 1ylr:B, 1ylu:A, 1ylu:B
59 8ajx:A 240 191 0.2245 0.1833 0.2304 0.14 1f5v:A, 1f5v:B, 7nb9:A, 7niy:A, 7nmp:A, 7nnx:A, 7q0o:A, 7z0w:A, 7z0w:B, 7z0w:C, 7z0w:D, 7z0w:E, 7z0w:F, 7z0w:G, 7z0w:H
60 1v5y:A 217 49 0.0867 0.0783 0.3469 0.14 1v5y:B, 1v5z:A, 1v5z:B, 1vfr:A, 1vfr:B
61 2h0u:A 196 43 0.0765 0.0765 0.3488 0.54
62 8v1t:A 1064 64 0.0867 0.0160 0.2656 0.57
63 8dor:A 217 30 0.0561 0.0507 0.3667 0.63 8dor:B, 8dor:C, 8dor:D
64 7vqk:A 195 61 0.0765 0.0769 0.2459 0.92 7vqk:B
65 6czp:A 219 71 0.0867 0.0776 0.2394 1.3 6czp:B, 6czp:C, 6czp:D, 6czp:E, 6czp:F, 6czp:G, 6czp:H, 7uwt:A, 7uwt:B
66 2ymv:A 327 84 0.1020 0.0612 0.2381 2.3
67 3u0o:B 335 46 0.0765 0.0448 0.3261 4.3 3u0o:A
68 5imt:A 460 38 0.0765 0.0326 0.3947 5.0
69 6bea:A 433 109 0.1224 0.0554 0.2202 9.6

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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